Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1407 ATGTCATCATCAAATTCACCATGTGCGGCGTGCAAAATCCAGAGAAGAAAATGCACACAAGAATGCGTATTTGCACCATACTTCCCACCGGATCAGCCACAGAAATTCGCCAACGTCCACAAAGTATTCGGTGCAAGTAACGTAGCCAAACTTTTAAACGAACTGAACGCAACACAACGTGAAGACGCGGTTAATTCATTAGCCTACGAAGCCGAGTTCCGTTTACGTGACCCAGTCTACGGTTGCGTTGGCTTAATCTCCGTCCTTCAACACAAACTCAAACAAATGCAAAGCGATCTCTACAATGCTAAAAAAGAACTGGCCTCTTATATTGGTCCTCAAGCCATGCTCCCAATTCTCCAACCACAACCACAACCACCCACACCAACCCCTTCCTCCTCCGCTTTACTTCCATACAATATCTCCCCTCTGTTAGCCATTCCCCCTTCCACCGCCCCTGGCTCTTCCCAACAGATGCTCATTCCTCCTCAACACCAAATGCAGCAGCAGCAGCAGCAGCAGCAGTTATTCGAGGCTCAACAATTGGCTGCGGCTGTAGCCGCCAGAGAGCAACAAGAAATGTTCAGAGCTTATGAGCATAAGCAATCCCACCACCACCACCAACAACAACAACGCCAACATGAGCTTTTGAGATTCAATGGGTTTGATGCTGGTGGTGGATTTAATAATCAAATGAATTCTTCTCCCTCTAATTTGACTTTGGGGACTTTTGTTGATAACACCTACCAAATTCAAACACAACCTGAACATTCACATTCCCATTCCCATTCCCCGCTTCAAGTACAGCTGTTTCTTCAACCTCAACAAACTCAGCTTGATCAACCACAGCACCCTCATCCACATCAATCCCACAAGCCTGAAACTACTCCTGCTGATGATGGTAGGAATAATAATATTAACATTGGCCCCTCTTGTTAA 939 46.01 MSSSNSPCAACKIQRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELNATQREDAVNSLAYEAEFRLRDPVYGCVGLISVLQHKLKQMQSDLYNAKKELASYIGPQAMLPILQPQPQPPTPTPSSSALLPYNISPLLAIPPSTAPGSSQQMLIPPQHQMQQQQQQQQLFEAQQLAAAVAAREQQEMFRAYEHKQSHHHHQQQQRQHELLRFNGFDAGGGFNNQMNSSPSNLTLGTFVDNTYQIQTQPEHSHSHSHSPLQVQLFLQPQQTQLDQPQHPHPHQSHKPETTPADDGRNNNINIGPSC 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31271564 31272502 + CePI673135_02g014070.1 Cec02g1407 196460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1407 312 Coils Coil 86 106 - -
Cec02g1407 312 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Cec02g1407 312 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 201 - -
Cec02g1407 312 MobiDBLite consensus disorder prediction 152 173 - -
Cec02g1407 312 MobiDBLite consensus disorder prediction 277 312 - -
Cec02g1407 312 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1407 Cec-Chr2:31271564 Cec11g1157 Cec-Chr11:23600517 2.70E-45 dispersed
Cec02g1407 Cec-Chr2:31271564 Cec10g1403 Cec-Chr10:28374804 2.90E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29065 PF03195 LOB 2.40E-41 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1407 - - - 0.0