Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1447 ATGGCGACTTCGACACTGGGCGGCACCATAGGCTTCTCCCAGCCCTCGTCTTCCTCGCATATCTCAGTTTATTGCACTCCCTTTTCAACCAGCAGATTCAGTTTCTCGAGGACCATTTTTTCTCCTCTTAAGCTTGAAAAACCACCATCTGGAAGAAGAGCCAGAGCTGTAATTGCTGTGAAAATGGCTGCTGAGGCTTTTCAGGAAGTTTTTCCTCCAGCCCTCACTTCAGCTTCAGAACCACCTCCTCTCTTTGATGGAACAACGAGGCTTTACATATCTTATACATGCCCTTATGCGCAGCGTGTGTGGATTACTCGGAATTGTAAGGGTTTGCAGAATAAGATACAATTGGTTCCAATAAATCTACAGGATAGGCCATCTTGGTACATGGAAAAAGTTTACCCACCTAACAAGGTGCCAGCTCTTGAACATAATAATGAGGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGAAGGGCCTTCATTATTTCCTGATGATCCAGGAAAGCGAGAGTTTGCTGAAGAGCTGATAGACTACGTGAACTCTTTCACGAAATCTGTGGTTTCTTCATTTAAAGGAGATGGAAATGAAGCTGATGTGGCATTTGACTACATCGAATCTGCTCTTTCAAAATATGGAGATGGCCCGTTTTTTCTAGGCCAGTTTAGTCTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCAGCCGTTCTTATTAGAAGTAAAAACATATGACATCACTGCTGGCAGGCCAAAACTAGCAGCTTGGATTGAGGAGATGAACAAGATCGAAGGGTACCAGAAAACAAGGGGCGATCCACGGGAACATGTTGATAGCTATAAGAAGCGATTCTTGAGCCATTTGTGA 894 43.06 MATSTLGGTIGFSQPSSSSHISVYCTPFSTSRFSFSRTIFSPLKLEKPPSGRRARAVIAVKMAAEAFQEVFPPALTSASEPPPLFDGTTRLYISYTCPYAQRVWITRNCKGLQNKIQLVPINLQDRPSWYMEKVYPPNKVPALEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPGKREFAEELIDYVNSFTKSVVSSFKGDGNEADVAFDYIESALSKYGDGPFFLGQFSLVDIAYAPFIERFQPFLLEVKTYDITAGRPKLAAWIEEMNKIEGYQKTRGDPREHVDSYKKRFLSHL 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31808412 31813295 + CePI673135_02g014470.1 Cec02g1447 196500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1447 297 PANTHER GLUTATHIONE S-TRANSFERASE L1 62 296 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Cec02g1447 297 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 87 168 IPR004045 -
Cec02g1447 297 SFLD Main (cytGST) 90 271 - -
Cec02g1447 297 CDD GST_C_Lambda 173 290 - -
Cec02g1447 297 Gene3D - 166 297 - -
Cec02g1447 297 Gene3D Glutaredoxin 62 165 - -
Cec02g1447 297 FunFam Glutathione S-transferase L2, chloroplastic 62 165 - -
Cec02g1447 297 Pfam Glutathione S-transferase, C-terminal domain 208 267 - -
Cec02g1447 297 FunFam Lambda class glutathione S-transferase 166 296 - -
Cec02g1447 297 SFLD Glutathione Transferase (cytosolic) 90 271 IPR040079 -
Cec02g1447 297 Pfam Glutathione S-transferase, N-terminal domain 91 167 IPR004045 -
Cec02g1447 297 SUPERFAMILY GST C-terminal domain-like 164 293 IPR036282 -
Cec02g1447 297 SUPERFAMILY Thioredoxin-like 78 169 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1447 Cec-Chr2:31808412 Cec10g2074 Cec-Chr10:35464162 6.60E-89 dispersed
Cec10g2073 Cec-Chr10:35448244 Cec02g1447 Cec-Chr2:31808412 1.40E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1447 K00799 - csv:101220995 526.554