Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1451 ATGGGATGGTTTCTCTGTTCTGGAAGTTCGAATAAGAAGGAAAAACATCAGCAGCGGCAGGTTCAGAAGAAGGACGATGATCCGATCCCATCAACTTCAGAAAAATTGATGGTAAAGACGACATTTAATGGGAAGAACGAGGCTCTGAAAGATGGAGGTTCTGATCAAATTGCAGCACAAACAATTACATTCTCATTCCGAGAGTTGGCAGCTGCAACAAAGTATTTTAGAGCCGACTGTCTTTTGGGTGAAGGAGGTTTTGGTCAAGTTTATAAAGGACGATTGGAGAGCATAAATCAGGTAGTTGCCATCAAGCAACTTGATCGAAATGGGCTACAAGGAAACAGGGAATTTCTCGTTGAAGTACTAATGTTAAGCCTACTCCATCACCCAAATCTTGTTAATTTAATTGGCTATTGTGCGGATGGTGATCAAAGACTTTTGGTTTATGAATACATGCCATTGGGATCGTTGGAAGACCATTTACATGATCTCCCACCTGATAAAAGACGACTTGACTGGAATACAAGAATGAAAATAGCTGCTGGTGCTGCAAAGGGCTTAGAGTATTTGCATGACAAAGCTAACCCCCCAGTTATATATCGTGATCTGAAATGCTCTAACATCCTGCTTGGTGAAGATTACCATCCTAAGCTTTCCGATTTTGGCTTGGCAAAATTAGGCCCCGTGGGGGATAACACTCATGTGTCCACAAGAGTGATGGGAACATATGGATACTGTGCTCCTGAGTATGCAATGACAGGCCAGCTCACTTTAAAATCAGATGTTTATAGCTTTGGAGTTGTTCTACTCGAAATTATTACTGGGAGAAAAGCTATTGACAATTCAAGAGCCGCAGGGGAACATAATTTGGTGGCATGGGCTCAGCCCTTATTTAAAGACAGAAGGAAATTTTCGCAGATGGCCGATCCATTGCTCCAAGGACAATACCCAGTCAGAGGCTTATATCAAGCTCTTGCAGTAGCTGCAATGTGTGTTCAGGAACAGCCTCATATGCGACCCCTTATTGCTGATGTTGTCACAGCCCTTTCATATCTTGCTTCCCAAAAATACAACCCCGAAACTCAGCCAGTTCAAAGCGCTCGCAATAGCTCCTCTACTCCCAGGATCAGCAGGGCCACATTAACCAAAGGAAAGATCACTGTGTTTTGCTATCTTCTTCTTCCTCGCTCTGCTCCGCCTGTCGCCGCCCTAAAATCGCTAACCATAATGGACCGATTGACTTCGAATTTGCTTGATGAAGCTATAGGTTTTGATGATCCCACTAAGACCTCCCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTTCATCACCTTCTCAAGCGCGCCTTTTCTTCTCGTCACTCGTCCAATGCCGTCATCTTCATTGCATTCTCTCAGTCCTTCGTCCATTACGACCGCGTGCTCAGGAAACTGGGGTGTAATTTAGCTGCTCAAAGGGACAGCGGTAGGTTCGTTTTCTTTGACATGCTTACGCTGGGCTGTTCAGATAGAAGTGGAAAGGAAACTGATGAAGGTGTTCTTGTTGGGCTGTACTGCAAAATTCAAAGAGCTGTTAATGCTTTAATTCAAGAGAACAAAAGGCATGTCACCATTGTGATTGATGATATACCTCTTTTGGAGGTTGCTGCCAATGGTTCTATAAATCATGTCTTAGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGTTGTTCCATAATTGCACTTAATCACGAAGATGTTTACGTGGACATCGAAAGGCCACTGATACTACAGATGGAATACCTTGCTGACGTTTTGATAAAAGTAGGACCACTAGCCACAGGTATAGCAAAGGACGTTCATGGGCAGCTGACAGTTTTGAACAAGCCAGTTGGAGGTCTGCAAGACAAGTTGAGAAACAGAGTGCATAATTTTCACTTTTACATCAAGGAAAATGGTACTGAATTTTTTTATTCTGGAAGCAGAGCTTGA 2013 43.42 MGWFLCSGSSNKKEKHQQRQVQKKDDDPIPSTSEKLMVKTTFNGKNEALKDGGSDQIAAQTITFSFRELAAATKYFRADCLLGEGGFGQVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKRRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEDYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSRAAGEHNLVAWAQPLFKDRRKFSQMADPLLQGQYPVRGLYQALAVAAMCVQEQPHMRPLIADVVTALSYLASQKYNPETQPVQSARNSSSTPRISRATLTKGKITVFCYLLLPRSAPPVAALKSLTIMDRLTSNLLDEAIGFDDPTKTSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSRHSSNAVIFIAFSQSFVHYDRVLRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLYCKIQRAVNALIQENKRHVTIVIDDIPLLEVAANGSINHVLDFLHYCHTLTSEIGCSIIALNHEDVYVDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQDKLRNRVHNFHFYIKENGTEFFYSGSRA 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31853469 31865397 + CePI673135_02g014510.1 Cec02g1451 196504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1451 670 FunFam Serine/threonine-protein kinase PBS1 47 152 - -
Cec02g1451 670 Pfam Protein tyrosine and serine/threonine kinase 80 296 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g1451 670 CDD Elp6 437 665 - -
Cec02g1451 670 CDD STKc_IRAK 82 350 - -
Cec02g1451 670 Gene3D Transferase(Phosphotransferase) domain 1 153 374 - -
Cec02g1451 670 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524(InterPro)
Cec02g1451 670 Gene3D - 426 666 IPR027417 -
Cec02g1451 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g1451 670 PANTHER OS07G0668900 PROTEIN 14 373 - -
Cec02g1451 670 Gene3D Phosphorylase Kinase; domain 1 37 152 - -
Cec02g1451 670 SUPERFAMILY Protein kinase-like (PK-like) 64 372 IPR011009 -
Cec02g1451 670 SMART serkin_6 76 353 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1451 670 FunFam Serine/threonine-protein kinase PBS1 153 368 - -
Cec02g1451 670 Pfam Elongation complex protein 6 431 657 IPR018627 GO:0002098(InterPro)|GO:0033588(InterPro)
Cec02g1451 670 MobiDBLite consensus disorder prediction 12 32 - -
Cec02g1451 670 ProSiteProfiles Protein kinase domain profile. 76 353 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1451 670 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1451 Cec-Chr2:31853469 Cec05g0694 Cec-Chr5:5685097 5.90E-162 dispersed
Cec10g2072 Cec-Chr10:35445360 Cec02g1451 Cec-Chr2:31853469 1.40E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71748 PF07714 PK_Tyr_Ser-Thr 8.20E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1451 - - - 0.0