Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1459 ATGATGTTGGATCTCAACGATTCGATTATGAACCGTGACGAAACGACGGCGGAGCGGATCGTAATGGAAGATTCAGAGACTTCAAATTCCTCCGTTGTTAATGCTGCCGACGAGGTTTCCAATAGCAGAGATGAAGATTCCTCTGTTTTAATCTTCGATATTCTCAAAAGGGAAAGTTCCGGCGGCGGCAGCGGCTGCGGCGCGTCCCCGGGATTGGTGACTCAGACACTTTTTCCGGTGGTTGGAGGATGGGGGGATTCTGGGTCTCCAGTGCCCAGAACCCATTGGTTGAACTTGTCGTCGACGGCGGATTCCGGCGGCGGCGGTGGACAGCCGGAGTTGAGAATTGTGCAGCAGAAACAGCAGCAGGTGAGGAAGAGCCGCCGTGGGCCGCGCTCCCGGAGCTCGCAGTTCCGAGGAGTTACCTTTTACCGGCGAACTGGAAGATGGGAATCTCATATTTGGGATTGTGGGAAACAAGTTTATTTGGGTGGGTTTGACACAGCCCATGCTGCAGCAAGGGCTTATGATCGAGCAGCAATAAAGTTTAGAGGAGTCGATGCAGACATAAACTTCAACATAAGTGATTACGATGAAGATATGAAACACATGAAGAATCTAAGCAAAGAAGAGTTTGTGCATGTTCTTCGTCGACAAAGCACTGGATTTTCTCGTGGAGGATCGAAACTAAGAGGACTGTCTCTTCAAAAATATGGAAGATGGGAAAATCAAATGAGCCAAATTATTGGGAAGAATGGAATTGAGCAGAGGTCTTACCAAGGGGAAACAATGGTGGATGCAAGCAATGGAGGCAATGGGCATAATCTTGATCTGAGCATTGGAGGAATTTTCAACTACCATTTTAGTAATTCTCCTCAAAAACTCAACATTGAGAGACCAAAGAATGAAAACAATGGTTATGCATGTGGTGTGGCTGGCCAACAACCTCATATTCCTCCTTCTATGTGGTCTAGTTTTTACTCTGGTTTTTTAGCAGATAACGAGGAAAGAGGGAGAGAAAAGAGAAACGACTCAACGAAGAGTCCTACGAGTTGGGGATGGCAAATGCCAACGTCGACGTCGACATCGATGTCAATGCCAATGCAAATTCAAGGAAATATGAGTGGAAAAAGCAATTACAAGAATAATAATAATAATAACAACAACAATAATAATAATATGAGTAGTAATGGAATAATAGAAAGAGAAGAAGCTCATGTTTCCAAGATTGCAGCATCATCAGGATTCTCTTCCTCTTCTAATTTTGGTTCACTTTATGCCCAAAACAACACTGCCCTCCACAGTACTCACTGCCCCAATATTTCTTGA 1329 44.85 MMLDLNDSIMNRDETTAERIVMEDSETSNSSVVNAADEVSNSRDEDSSVLIFDILKRESSGGGSGCGASPGLVTQTLFPVVGGWGDSGSPVPRTHWLNLSSTADSGGGGGQPELRIVQQKQQQVRKSRRGPRSRSSQFRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNISDYDEDMKHMKNLSKEEFVHVLRRQSTGFSRGGSKLRGLSLQKYGRWENQMSQIIGKNGIEQRSYQGETMVDASNGGNGHNLDLSIGGIFNYHFSNSPQKLNIERPKNENNGYACGVAGQQPHIPPSMWSSFYSGFLADNEERGREKRNDSTKSPTSWGWQMPTSTSTSMSMPMQIQGNMSGKSNYKNNNNNNNNNNNNMSSNGIIEREEAHVSKIAASSGFSSSSNFGSLYAQNNTALHSTHCPNIS 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31986375 31990168 + CePI673135_02g014590.1 Cec02g1459 196512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1459 442 Pfam AP2 domain 137 185 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1459 442 SUPERFAMILY DNA-binding domain 136 195 IPR016177 GO:0003677(InterPro)
Cec02g1459 442 MobiDBLite consensus disorder prediction 21 40 - -
Cec02g1459 442 CDD AP2 137 195 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1459 442 ProSiteProfiles AP2/ERF domain profile. 137 193 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1459 442 MobiDBLite consensus disorder prediction 347 396 - -
Cec02g1459 442 MobiDBLite consensus disorder prediction 22 38 - -
Cec02g1459 442 FunFam AP2-like ethylene-responsive transcription factor 136 195 - -
Cec02g1459 442 SMART rav1_2 137 199 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1459 442 MobiDBLite consensus disorder prediction 335 396 - -
Cec02g1459 442 Gene3D AP2/ERF domain 136 195 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1459 442 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 27 261 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1459 Cec-Chr2:31986375 Cec02g2188 Cec-Chr2:39317021 1.40E-71 dispersed
Cec10g2067 Cec-Chr10:35404544 Cec02g1459 Cec-Chr2:31986375 3.50E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29067 PF00847 AP2 1.10E-09 CL0081 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1459 K09284 - csv:101204131 708.753