Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1461 ATGACGAGCCTCCGATTCTTGTTCAGCAATGGCGTCGTATTGCAAGGCTCCGAAGCTCCTCCGGTCGCCACCTTCCTCGAAACTCATCCTGGCGCTTATACAACCACTCGGTCACATAATAATGCATCGAGCATTCTGTTTTGGGATAGGCACATGAAAAGGCTGAGTCAGTCGGTGAAAATTCTGTCGAATTCAAGTCCACTACTCTTGTCAGAATCTAACAGAACAATCAATAAACTGGTAAAACCGTCGTGGATAGATTCTGTTCCCTGGGAACCAGCTATCCGGACGCTTGTTGATGATTCAATGAGAAAAGTGTTGCCAACAGCATTGAATGAGAGAATTGGGGGAGAAGAATTGACAATTACAGTGCTCGTAAGTGTGAATTTGGAAAATTTGGGTGAAAATGACGGTGTTGTGGATGTAGAAAGACTTAAAGAGGCCCTTGATGTGCACGTGCATGTTGGTAGTTATGTTCCTCGTGAATTTGGTGTCCCGGAAAATGGTGCGAATCTGGCTGTGGTGGGTCGAGGGAGGGATGTTGCTGCGGCAAAGTACTCAGATTGGGTTAGGCGTAGGAAGTCTCTGGAAAAATTGAGGCCTCCATCTGTGACCGAGCTTTTGTTGTCAAATGATGGTGATCATATACTTGAAGGCTGCGTGACAAACTTTTTTGTTGTTTGCCGCAAGAATAATAATGAAGCCAAAGAGACAAGCGTTCTTGATTCCGCAAGAACATATTCCTTTGAACTGCAGACAGCTCCCATTAATGATGGTGTTCTGACTGGAGTTATTCGTCAATTAGTCATTGAAGCTTGTTCAAGCAACGGCATCCCATTTCGAGAAGTTGCACCTACTTGGTCAAGTAATGAAATATGGGAAGAAGCATTTGTTACAAGTAGCTTGAGAATCGTGGAGCATGTGAATACTATTTGCATCCCTAGCATATGGGACTTGCTCGACTCGAAAACGTGGAGTGATATATCATGGAACAAGAAGTCGTTTAAGGATGCTCCTGGAATGGTCTCAAGCACAATCCAGAAAGAGATAATGGAGAAAGCTGTTGCAGAAGCATTCCCGATTGCGCGCCAAATACAAAAATTTCTCCTCTTTCCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTCAGGATCTCCCTCATATGGCGGAGCCTCCCACCAGTCCGGCCGGCGGCAGCCACGAAAGCGGCGGTGAGCAGAGCCCTAACACAGGTGGCGTTCGTGAACAGGACCGATTTCTTCCGATCGCTAATATTAGTCGGATCATGAAGAAAGCCTTACCTGCTAATGGCAAGATCGCTAAAGACGCTAAAGATACCGTCCAGGAATGCGTCTCTGAATTCATTAGCTTCGTTACTAGCGAGGCGAGTGATAAGTGTCAGAAGGAGAAGAGGAAGACTATTAATGGAGATGACTTGCTTTGGGCAATGGCGACGTTGGGATTTGAGGAATATATTGATCCGCTTAAGTCGTACCTTACTAGATACAGAGAGTGTGATGCTAAAGGATCTTCTAGGGGTGGTGACGAATCTGCTAAAAGAGATCCAGTTGGAGCCTTGCCTGGTCAAAATTCCCAGGGCATTGTGGACTCCGCCATCTTCTTAACAAGCATCTTGCTCGGCTCCCTCATACCCAACCCAACAACTCTCATAGCAAAGGAAAACAAGCCAACCAATCGAAGCAGCATTTTGTGGAAGATCTTCCCATCTGTCAATCCACTTTGGTCAGCCAATTGGTTGGGACAACGCATTCCCACAGACCCACTTGGTGTTGGCTGTTTGATGTCTCTTCAGTCCTCACCATTCGAAAATTGTTCGGAACCCTCCTCCTTTCGATTTCCCTCTCTCGGAACCGCCCCTTCCTCTGCAATCGACAGCCAACAAGGACGACGAAAATTGGACATGATGCAACTACAAATGATGGGACGAAAAAAAGATGGACGTCGACAATGCAAGTGCAAGTTGCAGGCGGCTGGCGACAGGAGATGGACGTTGGATGACGACGCGAACAGATCCCACAGGGAAAATTGA 2064 46.41 MTSLRFLFSNGVVLQGSEAPPVATFLETHPGAYTTTRSHNNASSILFWDRHMKRLSQSVKILSNSSPLLLSESNRTINKLVKPSWIDSVPWEPAIRTLVDDSMRKVLPTALNERIGGEELTITVLVSVNLENLGENDGVVDVERLKEALDVHVHVGSYVPREFGVPENGANLAVVGRGRDVAAAKYSDWVRRRKSLEKLRPPSVTELLLSNDGDHILEGCVTNFFVVCRKNNNEAKETSVLDSARTYSFELQTAPINDGVLTGVIRQLVIEACSSNGIPFREVAPTWSSNEIWEEAFVTSSLRIVEHVNTICIPSIWDLLDSKTWSDISWNKKSFKDAPGMVSSTIQKEIMEKAVAEAFPIARQIQKFLLFPSSSSSSSSSSSSSSFQDLPHMAEPPTSPAGGSHESGGEQSPNTGGVREQDRFLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLTRYRECDAKGSSRGGDESAKRDPVGALPGQNSQGIVDSAIFLTSILLGSLIPNPTTLIAKENKPTNRSSILWKIFPSVNPLWSANWLGQRIPTDPLGVGCLMSLQSSPFENCSEPSSFRFPSLGTAPSSAIDSQQGRRKLDMMQLQMMGRKKDGRRQCKCKLQAAGDRRWTLDDDANRSHREN 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32002614 32018847 + CePI673135_02g014610.1 Cec02g1461 196514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1461 687 PRINTS CCAAT-binding transcription factor subunit A signature 471 489 - -
Cec02g1461 687 PRINTS CCAAT-binding transcription factor subunit A signature 490 508 - -
Cec02g1461 687 PRINTS CCAAT-binding transcription factor subunit A signature 452 470 - -
Cec02g1461 687 Gene3D - 30 89 IPR043131 -
Cec02g1461 687 Gene3D Histone, subunit A 414 536 IPR009072 GO:0046982(InterPro)
Cec02g1461 687 MobiDBLite consensus disorder prediction 512 534 - -
Cec02g1461 687 MobiDBLite consensus disorder prediction 404 418 - -
Cec02g1461 687 Pfam Amino-transferase class IV 31 305 IPR001544 GO:0003824(InterPro)
Cec02g1461 687 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 424 488 IPR003958 -
Cec02g1461 687 MobiDBLite consensus disorder prediction 374 392 - -
Cec02g1461 687 FunFam Nuclear factor Y, subunit B1 414 513 - -
Cec02g1461 687 ProSitePatterns NF-YB/HAP3 subunit signature. 455 471 IPR003956 GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g1461 687 Gene3D - 171 367 IPR043132 -
Cec02g1461 687 MobiDBLite consensus disorder prediction 374 420 - -
Cec02g1461 687 PANTHER D-AMINOACID AMINOTRANSFERASE-LIKE PLP-DEPENDENT ENZYMES SUPERFAMILY PROTEIN 1 363 - -
Cec02g1461 687 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 20 311 IPR036038 GO:0003824(InterPro)
Cec02g1461 687 SUPERFAMILY Histone-fold 421 522 IPR009072 GO:0046982(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0951 Cec-Chr2:13010460 Cec02g1461 Cec-Chr2:32002614 3.20E-42 transposed
Cec03g1762 Cec-Chr3:35920762 Cec02g1461 Cec-Chr2:32002614 4.10E-25 transposed
Cec07g1022 Cec-Chr7:24883369 Cec02g1461 Cec-Chr2:32002614 3.30E-40 transposed
Cec09g0592 Cec-Chr9:5127052 Cec02g1461 Cec-Chr2:32002614 5.00E-35 transposed
Cec10g0423 Cec-Chr10:5109684 Cec02g1461 Cec-Chr2:32002614 2.70E-42 transposed
Cec10g0441 Cec-Chr10:5277628 Cec02g1461 Cec-Chr2:32002614 2.00E-31 transposed
Cec10g2065 Cec-Chr10:35366968 Cec02g1461 Cec-Chr2:32002614 2.70E-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29068 PF01063 Aminotran_4 1.30E-14 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1461 - - - 0.0