Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1466 ATGTCTTCTTCCTCCACCGCCACCAATTTTGCTTCCCCACCCACTTCTCGGCCCTCCTCTCCTCCTCCGCCTGCCGTCGTCCTCAGCCCCTGCGCCGCCTGTAAAATCCTCCGCCGCCGCTGCGTCGAGAAATGTGTTTTGGCTCCATATTTCCCTCCCACTGAGCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGTGCTAGCAATATCATCAAGTTCTTGCAAGAGCTTCCAGAGTCTCAAAGAACAGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGACTGCGAGATCCAGTTTACGGTAGTGCGGGTGCGATTTGTCAGCTGCAAAAGCAAGTGAGCGAGTTGCAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCCAACATGCAACAACAACAAGCCAACTTACTAGCCTTGATTTGCATGGAAATGAGGCAGTCACCAGAACCTGTTTGGCCACCGCAACTCATCGACACTGCATGTTTTCTCGACGATGCCACCCTTAGCTCGCCGTGGGAGCCACTTTGGACATGA 546 52.75 MSSSSTATNFASPPTSRPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWPPQLIDTACFLDDATLSSPWEPLWT 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32108398 32109587 + CePI673135_02g014660.1 Cec02g1466 196519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1466 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 29 139 - -
Cec02g1466 181 Pfam Lateral organ boundaries (LOB) domain 30 127 IPR004883 -
Cec02g1466 181 MobiDBLite consensus disorder prediction 1 25 - -
Cec02g1466 181 Coils Coil 109 143 - -
Cec02g1466 181 ProSiteProfiles LOB domain profile. 29 130 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1466 Cec-Chr2:32108398 Cec02g2200 Cec-Chr2:39452897 1.10E-51 dispersed
Cec02g1466 Cec-Chr2:32108398 Cec02g1940 Cec-Chr2:37289655 1.80E-33 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29069 PF03195 LOB 1.30E-40 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1466 - - - 0.0