Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g1466 | ATGTCTTCTTCCTCCACCGCCACCAATTTTGCTTCCCCACCCACTTCTCGGCCCTCCTCTCCTCCTCCGCCTGCCGTCGTCCTCAGCCCCTGCGCCGCCTGTAAAATCCTCCGCCGCCGCTGCGTCGAGAAATGTGTTTTGGCTCCATATTTCCCTCCCACTGAGCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGTGCTAGCAATATCATCAAGTTCTTGCAAGAGCTTCCAGAGTCTCAAAGAACAGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGACTGCGAGATCCAGTTTACGGTAGTGCGGGTGCGATTTGTCAGCTGCAAAAGCAAGTGAGCGAGTTGCAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCCAACATGCAACAACAACAAGCCAACTTACTAGCCTTGATTTGCATGGAAATGAGGCAGTCACCAGAACCTGTTTGGCCACCGCAACTCATCGACACTGCATGTTTTCTCGACGATGCCACCCTTAGCTCGCCGTGGGAGCCACTTTGGACATGA | 546 | 52.75 | MSSSSTATNFASPPTSRPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWPPQLIDTACFLDDATLSSPWEPLWT | 181 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 32108398 | 32109587 | + | CePI673135_02g014660.1 | Cec02g1466 | 196519 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g1466 | 181 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 29 | 139 | - | - | |
Cec02g1466 | 181 | Pfam | Lateral organ boundaries (LOB) domain | 30 | 127 | IPR004883 | - | |
Cec02g1466 | 181 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cec02g1466 | 181 | Coils | Coil | 109 | 143 | - | - | |
Cec02g1466 | 181 | ProSiteProfiles | LOB domain profile. | 29 | 130 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1466 | Cec-Chr2:32108398 | Cec02g2200 | Cec-Chr2:39452897 | 1.10E-51 | dispersed | |
Cec02g1466 | Cec-Chr2:32108398 | Cec02g1940 | Cec-Chr2:37289655 | 1.80E-33 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29069 | PF03195 | LOB | 1.30E-40 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g1466 | - | - | - | 0.0 |