Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1490 ATGTCAAATTCCGATCATACCACCAACGCCAATGGCGTCTCCAATGCCGCCGCCATCGAAACCCACAAGAATCAGCCCTCTTCTAACGGAGCCCTCGTCGTCAAAAAACCCCCTTCTAAGGACCGTCACAGTAAAGTCGACGGCCGTGGCCGCCGCATCCGTATGCCCATCATCTGCGCCGCCAGAGTATTTCAGCTGACTCGAGAGCTTGGTCATAAATCCGACGGCCAAACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCTTCCATTATTGCCGCTACTGGTACTGGTACCACCCCTGCTAATTACTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACCACTTCTACTCTCTCCCTCTCTCGCCCTCAAGCTCTCTCCGGTCCCACGCCGTTCTTTCTCGGCAAGCGCGTTAGGTCCGACGATGACGGCAAAGACGATGGGTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTCCGACGGGGCCAGGTGGTTACTGGGCGATTCCTGCAAGACCTGATTACGGGCAGGTTTGGAGTTTTGCCGCCGCCGCTCCGTCGGAGATGGTGGTTCAACCAGGGGGGATTTCTCAGCAAGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAAGCATCGGCGGCGAGAGTGGGAAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGCGGAGGTTCTGGACGGCGGGAAGATGACCCTCGCTAA 774 56.59 MSNSDHTTNANGVSNAAAIETHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANYSSVSLSVRGNGGSASLSSPSSTTSTLSLSRPQALSGPTPFFLGKRVRSDDDGKDDGLGVGQAVGSIVGPTGPGGYWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGSGRREDDPR 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32438782 32439555 + CePI673135_02g014900.1 Cec02g1490 196543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1490 257 ProSiteProfiles TCP domain profile. 39 93 IPR017887 -
Cec02g1490 257 MobiDBLite consensus disorder prediction 112 137 - -
Cec02g1490 257 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 150 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0042752(PANTHER)|GO:0043565(PANTHER)
Cec02g1490 257 Pfam TCP family transcription factor 39 121 IPR017887 -
Cec02g1490 257 MobiDBLite consensus disorder prediction 20 51 - -
Cec02g1490 257 MobiDBLite consensus disorder prediction 36 51 - -
Cec02g1490 257 MobiDBLite consensus disorder prediction 112 162 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0828 Cec-Chr1:9272961 Cec02g1490 Cec-Chr2:32438782 4.80E-75 dispersed
Cec02g1490 Cec-Chr2:32438782 Cec11g1393 Cec-Chr11:28166933 8.60E-29 dispersed
Cec02g1490 Cec-Chr2:32438782 Cec06g1822 Cec-Chr6:31656827 1.10E-28 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29070 PF03634 TCP 6.10E-33 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1490 K16221 - csv:101206050 416.001