Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g1490 | ATGTCAAATTCCGATCATACCACCAACGCCAATGGCGTCTCCAATGCCGCCGCCATCGAAACCCACAAGAATCAGCCCTCTTCTAACGGAGCCCTCGTCGTCAAAAAACCCCCTTCTAAGGACCGTCACAGTAAAGTCGACGGCCGTGGCCGCCGCATCCGTATGCCCATCATCTGCGCCGCCAGAGTATTTCAGCTGACTCGAGAGCTTGGTCATAAATCCGACGGCCAAACCATCGAGTGGCTCCTTCGCCAGGCTGAGCCTTCCATTATTGCCGCTACTGGTACTGGTACCACCCCTGCTAATTACTCCTCTGTTTCTCTTTCCGTTAGAGGAAATGGCGGCTCTGCTTCTCTCTCTTCCCCTTCTTCCACCACTTCTACTCTCTCCCTCTCTCGCCCTCAAGCTCTCTCCGGTCCCACGCCGTTCTTTCTCGGCAAGCGCGTTAGGTCCGACGATGACGGCAAAGACGATGGGTTAGGAGTGGGTCAAGCGGTTGGGTCCATAGTGGGTCCGACGGGGCCAGGTGGTTACTGGGCGATTCCTGCAAGACCTGATTACGGGCAGGTTTGGAGTTTTGCCGCCGCCGCTCCGTCGGAGATGGTGGTTCAACCAGGGGGGATTTCTCAGCAAGCGTCGTTGTTTGCCCAACAGCAGCAGCCGATTAGAGAAGCATCGGCGGCGAGAGTGGGAAATTACCTTCCTGGTCATCTGAATTTACTGGCGTCTTTGTCCGGCGGAGGTTCTGGACGGCGGGAAGATGACCCTCGCTAA | 774 | 56.59 | MSNSDHTTNANGVSNAAAIETHKNQPSSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANYSSVSLSVRGNGGSASLSSPSSTTSTLSLSRPQALSGPTPFFLGKRVRSDDDGKDDGLGVGQAVGSIVGPTGPGGYWAIPARPDYGQVWSFAAAAPSEMVVQPGGISQQASLFAQQQQPIREASAARVGNYLPGHLNLLASLSGGGSGRREDDPR | 257 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 32438782 | 32439555 | + | CePI673135_02g014900.1 | Cec02g1490 | 196543 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g1490 | 257 | ProSiteProfiles | TCP domain profile. | 39 | 93 | IPR017887 | - | |
Cec02g1490 | 257 | MobiDBLite | consensus disorder prediction | 112 | 137 | - | - | |
Cec02g1490 | 257 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 17 | 150 | IPR005333 | GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0042752(PANTHER)|GO:0043565(PANTHER) | |
Cec02g1490 | 257 | Pfam | TCP family transcription factor | 39 | 121 | IPR017887 | - | |
Cec02g1490 | 257 | MobiDBLite | consensus disorder prediction | 20 | 51 | - | - | |
Cec02g1490 | 257 | MobiDBLite | consensus disorder prediction | 36 | 51 | - | - | |
Cec02g1490 | 257 | MobiDBLite | consensus disorder prediction | 112 | 162 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0828 | Cec-Chr1:9272961 | Cec02g1490 | Cec-Chr2:32438782 | 4.80E-75 | dispersed | |
Cec02g1490 | Cec-Chr2:32438782 | Cec11g1393 | Cec-Chr11:28166933 | 8.60E-29 | dispersed | |
Cec02g1490 | Cec-Chr2:32438782 | Cec06g1822 | Cec-Chr6:31656827 | 1.10E-28 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29070 | PF03634 | TCP | 6.10E-33 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g1490 | K16221 | - | csv:101206050 | 416.001 |