Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec02g1492 | ATGGCAATTCGAAAAAATTTCTCGTCTCTTATTTCTCGGTACTCGATCTTGCCTCCAATCTGCTCGGAGCTGCTGTCTTTTCATTTCTTAAAGAGGAATATGTCTCGGAAATCCCAGGTGATGGTTTCATTGCAACCCACCAAATCCATGCCAGTTAATTCTCGGTTCATGATTCCACAAGCTGCTGAAACTTTGGAAGAGCCTTATAATCGGAATGCGAAAACCATGGAAGCTAATTCGATAGTTGACAGTGAAAATGGTGCTGCTGGAGATGATGCCGTCAATGGACTCCAATGCAGTATGAACAATATTGATGAGCTGAATGAGGACTCACCATACAATTACAATATTACAACAGTGGAAGAAAGACCCACCATGGATGATGGAGAAGATGGTTTTATGCCTTTACCTTCACCTTCAGTGTCGGCTTCACATAGCGAACGCAGGTGGGGTGACACATCCTCCTACACGCCAAGGAAGATACTTCAGTCTTGGTTTAAACTTCCAAATGGGAATTGGGATCTTGTCAAGATACTATCAACGACAGGAACAGAGTCAGTAGTTTCACTGACTGATGGAAAGGTGTTAAAGGTGAAAGCTGAAAGTTTGATTCCTGCAAATCCGGATATTCTTGATGGTGTTGATGATCTTATGCAACTTAGCTATTTAAATGAGCCTTCAGTATTATATGATCTTGAGTACAGATATAATCAAGATATTATATATACAAAAGCAGGGCCAGTTCTGGTTGCTATCAATCCTTTTAAGAAAGTTGATTTGTATGGAAACGATTACATTGATGCATACAAGTGCAAAACAGTTGATAGCCCGCACGTATATGCCATTACTGATACAGCCATAAGAGAGATGATTCGAGATGAAGTAAATCAATCAATTATAATAAGCGGTGAAAGTGGAGCTGGGAAAACTGAAACAGCAAAGATAGCAATGCAATATTTGGCCGCTCTTGGTGGTGGAAGTGGAATAGAATATGAGATACTAAAGACCAATCCTATCTTAGAAGCTTTTGGAAATGCAAAAACATTGAGAAATGATAACTCAAGCCGTTTCGGAAAGTTGATAGAAATCCATTTTAGTGAAACTGGGAAAATATCTGGTGCAAATATTCAAACTTTTTTGCTTGAAAAGTCTAGAGTTGTCCAATGCACGGAGGGAGAGAGGTCATACCACATCTTTTATCAACTATGTAGTGGGGCTTCGCCTACACTTAAAGAGAAGCTAAACTTGAGAAGAGCGGAAGAGTACAAATATCTCTCCCAGAGCAGTTGTTTTTCAATAAGTAGAGTAAATGATGCCGAGGAGTTTCGTGTGGTCATGGAAGCACTAGATGTCGTCCATATCAGCAAAGAAGATCAGCACAGTGTATTTGCAATGCTTGCTGCTGTTCTATGGCTGGGAAATGTTTCCTTTAGTGTTATAGACAATGAGAATCATGTGGAGGCTGTGGAAGATGAAGGTTTACAGACGGTTGCTAAACTGATTGAGTGTGAGATTGAGGAGCTTAAACTAGCTTTATCAACTAGAAAAATGAGAGTTGGGAATGACAGCATTGTCCAAAAGCTTACTTTATCTCAGGCAATTGACACAAGAGATGCATTGGCAAAGTCAATTTACGCTTGTTTGTTTGAGTGGCTGGTCGAACAAATTAACAAATCCCTTTCTGTAGGCAAACGACGCACTGGCAGATCCATCAGCATTCTTGATATTTATGGCTTTGAATCGTTTGATAGAAATAGTTTTGAACAGTTCTGTATTAACTATGCAAACGAGAGACTACAGCAGCATTTCAATCGTCATTTATTTAAGCTAGAGCAGGAGGAATATATTCAAGATGGCATCGATTGGGCAAAAGTTGATTTTGACGACAACCAAGATTGTCTCAGTCTGTTTGAAAAGAAACCTTTGGGATTGTTGTCCCTGTTAGATGAGGAGTCTACTTTTCCAAATGGGACAGATCTGACCTTCGCGAACAAGCTTAAGCAGCATTTGGGTCCTAATTCTTCTTTTAGAGGAGAACGAGGGAAAGGCTTCACTGTCTATCATTATGCAGGAGAGGTCACTTACGACACAACTGGTTTTCTGGAGAAAAACAGGGACTTGCTACATTTAGATTCGATTCAACTCCTATCCTCATGCTCATGCCATCTCCCTCAGATTTTTGCATCCAACATGCTAACTCAATCGGAAAAGTCCATAGGTGGCACTTTACACAAGTCTGGTGGTGCAGAATCCCAAAAACTAAGTGTTGCAAGAAAGTTTAAGGCTCAATTATTCCAATTGATGCTCCGTCTTGAAAATACAACACCCCATTTTATCCGTTGCATCAAGCCCAACAACGTTCAGTCTCCCAGATTGTATGAGCAAGGACTTGTATTACAACAGTTAAGATGTTGTGGGGTCCTAGAAGTGGTACGAATATCACGAGCTGGTTTTCCTACCCGGATGTCACATCAGAAATTTGCTAGAAGGTATGGTTTCCTTCTACAAGAAAACATTGCATCACAGGATCCCCTAAGTGTCTCTGTCGCAATTCTTCATCAATTCAATATATTGCCTGAAATGTACCAAGTTGGCTATACAAAATTGTTTTTCCGAACTGGGCAGATTGGAGTGCTTGAAGATACAAGAAACCGCACCCTCCATGGGATTCTCTCTGTTCAAAGCTGTTATAGAGGGCATCTGGCTCGACGCCACCTCAAAGAGCTGAAGAGAGGGATTTCCATACTTCAGTCATTTGCACGTGGGGAGAAAGCAAGAAAAGAATATGCAATCTTGATGCAAAGACATAGGGCTGCTATTTCTATTCAAAAGTGTGTGAAAGCCAGAATTGCTAGTAAACGTTTGAAGAAAGTCTGTGATGCATCACTTACGATACAATCGGTTATCCGTGGCTGGTTGGTCAGGAGATGCTCAGGGGATATAGGTTTAATGAAACCTGGTGGCCTGACGGCAAATGGGTCAGGTGAGGTGCTTGTTAAGTCATCATTCCTTGCAGAATTACAACGCCGTGTCCTGAAGGCCGAGGCTGCTTTGCGAGAGAAAGAAGAGGAAAACGACATCCTCCATCAACGTCTCCAACAGTATGAGAACCGTTGGTCAGAGTATGAGCTGAAAATGAAGTCAATGGAAGAGGTGTGGCAGAGACAAATGAGATCCCTGCAGTCTAGCCTCTCCATTGCAAAGAAAAGCCTAGCAGTTGATGATTCAGAAAGAAATTCTGATGCATCAGTGAACGCAAGCGATGACAGAGGATACAGTTGGGAAGTGGGTAGCAACAACACAGCTAACGAAAGCAATGGAGTAAGACCAATGAATGCAGGTCTCAGCGTCATTAGCCGATTGGCTGAAGAATTCGAACAAAGAAGTCAAGTGTTTGGCGACGATGCAAAGTTCTTGGTAGAGGTAAAATCCGGTCAAGTTGAGGCAAGTCTTGACCCGGATAGGGAACTTAGAAGGTTGAAGCAAATGTTTGAAGCATGGAAGAAAGATTACGGGGGAAGGCTGCGCGAAACGAAAGTGATTTTGAATAAGCTTGGAAATGAAGGTGCCATGGATAGGGTGAAAAAGAAATGGTGGGGAAGAAGGAACAGCACAAGGTATAGTTAA | 3627 | 41.69 | MAIRKNFSSLISRYSILPPICSELLSFHFLKRNMSRKSQVMVSLQPTKSMPVNSRFMIPQAAETLEEPYNRNAKTMEANSIVDSENGAAGDDAVNGLQCSMNNIDELNEDSPYNYNITTVEERPTMDDGEDGFMPLPSPSVSASHSERRWGDTSSYTPRKILQSWFKLPNGNWDLVKILSTTGTESVVSLTDGKVLKVKAESLIPANPDILDGVDDLMQLSYLNEPSVLYDLEYRYNQDIIYTKAGPVLVAINPFKKVDLYGNDYIDAYKCKTVDSPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCTEGERSYHIFYQLCSGASPTLKEKLNLRRAEEYKYLSQSSCFSISRVNDAEEFRVVMEALDVVHISKEDQHSVFAMLAAVLWLGNVSFSVIDNENHVEAVEDEGLQTVAKLIECEIEELKLALSTRKMRVGNDSIVQKLTLSQAIDTRDALAKSIYACLFEWLVEQINKSLSVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFDDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLGPNSSFRGERGKGFTVYHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSCHLPQIFASNMLTQSEKSIGGTLHKSGGAESQKLSVARKFKAQLFQLMLRLENTTPHFIRCIKPNNVQSPRLYEQGLVLQQLRCCGVLEVVRISRAGFPTRMSHQKFARRYGFLLQENIASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILSVQSCYRGHLARRHLKELKRGISILQSFARGEKARKEYAILMQRHRAAISIQKCVKARIASKRLKKVCDASLTIQSVIRGWLVRRCSGDIGLMKPGGLTANGSGEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYENRWSEYELKMKSMEEVWQRQMRSLQSSLSIAKKSLAVDDSERNSDASVNASDDRGYSWEVGSNNTANESNGVRPMNAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDRELRRLKQMFEAWKKDYGGRLRETKVILNKLGNEGAMDRVKKKWWGRRNSTRYS | 1208 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 32471013 | 32485288 | + | CePI673135_02g014920.1 | Cec02g1492 | 196545 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec02g1492 | 1208 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 185 | 933 | IPR027417 | - | |
| Cec02g1492 | 1208 | Gene3D | - | 582 | 774 | - | - | |
| Cec02g1492 | 1208 | ProSiteProfiles | IQ motif profile. | 888 | 914 | - | - | |
| Cec02g1492 | 1208 | ProSiteProfiles | IQ motif profile. | 909 | 938 | - | - | |
| Cec02g1492 | 1208 | Coils | Coil | 1004 | 1052 | - | - | |
| Cec02g1492 | 1208 | FunFam | Unconventional myosin-XIX | 582 | 774 | - | - | |
| Cec02g1492 | 1208 | Gene3D | - | 394 | 450 | - | - | |
| Cec02g1492 | 1208 | ProSiteProfiles | Myosin motor domain profile. | 212 | 884 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec02g1492 | 1208 | CDD | MYSc_Myo8 | 226 | 872 | IPR036022 | - | |
| Cec02g1492 | 1208 | MobiDBLite | consensus disorder prediction | 1075 | 1108 | - | - | |
| Cec02g1492 | 1208 | Pfam | Myosin head (motor domain) | 214 | 872 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec02g1492 | 1208 | MobiDBLite | consensus disorder prediction | 1092 | 1108 | - | - | |
| Cec02g1492 | 1208 | Pfam | IQ calmodulin-binding motif | 911 | 929 | IPR000048 | GO:0005515(InterPro) | |
| Cec02g1492 | 1208 | Pfam | IQ calmodulin-binding motif | 891 | 907 | IPR000048 | GO:0005515(InterPro) | |
| Cec02g1492 | 1208 | Pfam | IQ calmodulin-binding motif | 961 | 976 | IPR000048 | GO:0005515(InterPro) | |
| Cec02g1492 | 1208 | Gene3D | - | 890 | 936 | - | - | |
| Cec02g1492 | 1208 | Gene3D | - | 937 | 978 | - | - | |
| Cec02g1492 | 1208 | Gene3D | Kinesin motor domain | 211 | 817 | IPR036961 | - | |
| Cec02g1492 | 1208 | FunFam | Myosin heavy chain | 394 | 450 | - | - | |
| Cec02g1492 | 1208 | PANTHER | MYOSIN | 164 | 1198 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cec02g1492 | 1208 | SMART | iq_5 | 885 | 907 | IPR000048 | GO:0005515(InterPro) | |
| Cec02g1492 | 1208 | SMART | iq_5 | 957 | 979 | IPR000048 | GO:0005515(InterPro) | |
| Cec02g1492 | 1208 | SMART | iq_5 | 908 | 930 | IPR000048 | GO:0005515(InterPro) | |
| Cec02g1492 | 1208 | SMART | iq_5 | 934 | 956 | IPR000048 | GO:0005515(InterPro) | |
| Cec02g1492 | 1208 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 451 | 559 | - | - | |
| Cec02g1492 | 1208 | PRINTS | Myosin heavy chain signature | 242 | 261 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec02g1492 | 1208 | PRINTS | Myosin heavy chain signature | 296 | 321 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec02g1492 | 1208 | PRINTS | Myosin heavy chain signature | 570 | 598 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec02g1492 | 1208 | PRINTS | Myosin heavy chain signature | 338 | 365 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec02g1492 | 1208 | PRINTS | Myosin heavy chain signature | 623 | 651 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec02g1492 | 1208 | Gene3D | - | 818 | 885 | - | - | |
| Cec02g1492 | 1208 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 159 | 208 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec02g1492 | 1208 | SMART | MYSc_2a | 206 | 885 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec02g1492 | Cec-Chr2:32471013 | Cec11g1894 | Cec-Chr11:33162329 | 0.00E+00 | dispersed | |
| Cec02g1492 | Cec-Chr2:32471013 | Cec06g0135 | Cec-Chr6:1338131 | 4.30E-163 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec02g1492 | - | - | - | 0.0 |