Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1552 ATGGCTACCAATAATCTAAACAAAGAGCTGTCAAAGAAAACAAACATATTTGGACTAGAAGTATGGGAAGTGATTGGAATTGGAGTAGGCCTATTCATAATCTCAATCCTCTGTATACTCTCACTATGTTTAACCTCATTCAACAAGAAGTCAAAAAAATCATCATCATCATCACCCAACTCCAACACCTTATTCCCTCTCACTCAAATCCCATCTCATTCAAAAGACATAAAGGCAGTTCACATAACAACTACTCACAAAAAGCCAACAACTCAAATGGGAAAATTTGAAACCAATAATAATTACAGCAGTGAATCGGGATCATTGTTTCATCCATTGAGTTATGGCTATGGATCACAATCAGGGGATGAAGGCAGCTCAGGCACCATCACGACGACAACAATGTACCGACGTTCGACGTCGCCTACTACGACGATGGCTCCTTCGCCGTTGTCGTGTATGCCAGAGATGTTGCAATTGGGGTGGGGGTATTGGTTTACTTTGAGAGAGCTGGATTTGGCTACTAATTTGTTCTCAGAAGAGAATTTGATTGGAGAAGGAGGGTATGGAGTTGTGTTTAGAGGGAAGTTGTTGAATGGGACACCAGTGGCAGTTAAGAAGATTTTTAATGGACAGGGCCAAGCTGAGAAGGAATTCAGAGCGGAAGTTGAGGCAATTGGGCATGTAAGACATAAGAATCTTGTTCGTCTTATGGGATATTGCATTGAAGGGACTCACAGGATGCTGGTGTATGAGTATATAAACAATGGAAGCTTAGAGCTATGGTTACATGAAGGAATGGGAGAGAGTAGATATCTTACATGGGAGGCTCGAATGAAGATCATGTTGGGGACAGCCAAAGGAATTGCATACTTACACGAAGCCATTGAGCCAAAGGTGGTACATCGAGACATAAAGGCTAGCAACATACTTATAGATGAAAATTTCAATGCTAAAGTATCAGATTTTGGGCTAGCAAAGTTGATGGATGCTGGCAAAACTCATGTCACAACAAGAGTTATGGGTACATTTGGTTATGTGGCTCCTGAATATGCTAACACTGGACTTCTAAATGAGAAGAGCGACGTGTATAGCTTTGGAGTTGTGCTGGTGGAAACAATCACGGGAAGAGATCCAGTGGACTATGGACGTCCACCCAAACAGGTAAATGTAGTAGATTGGCTGAAAATGATGATTGGAAGTAGAAGATGTGAAGAAGTGGTGGACACAAAATTAGGGGTTGGAGGAATGCCATCCACAAGAGGGTTGAAAAGAGTTCTATTGGTTGCATTAAGATGTGTGGATCCTGATTATGACAAGAGACCAAAAATGGGCCAAGTTGTTAGAATGCTTGAATCTCAAGATCATCATTATAATTCTTCTCGTACACCTTCTACTACTACTACTACTTAA 1413 41.19 MATNNLNKELSKKTNIFGLEVWEVIGIGVGLFIISILCILSLCLTSFNKKSKKSSSSSPNSNTLFPLTQIPSHSKDIKAVHITTTHKKPTTQMGKFETNNNYSSESGSLFHPLSYGYGSQSGDEGSSGTITTTTMYRRSTSPTTTMAPSPLSCMPEMLQLGWGYWFTLRELDLATNLFSEENLIGEGGYGVVFRGKLLNGTPVAVKKIFNGQGQAEKEFRAEVEAIGHVRHKNLVRLMGYCIEGTHRMLVYEYINNGSLELWLHEGMGESRYLTWEARMKIMLGTAKGIAYLHEAIEPKVVHRDIKASNILIDENFNAKVSDFGLAKLMDAGKTHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLVETITGRDPVDYGRPPKQVNVVDWLKMMIGSRRCEEVVDTKLGVGGMPSTRGLKRVLLVALRCVDPDYDKRPKMGQVVRMLESQDHHYNSSRTPSTTTTT 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33137914 33142804 + CePI673135_02g015520.1 Cec02g1552 196605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1552 470 SUPERFAMILY Protein kinase-like (PK-like) 152 456 IPR011009 -
Cec02g1552 470 SMART serkin_6 178 451 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1552 470 ProSiteProfiles Protein kinase domain profile. 178 459 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1552 470 PANTHER OS01G0323000 PROTEIN 5 462 IPR052232 -
Cec02g1552 470 ProSitePatterns Protein kinases ATP-binding region signature. 184 207 IPR017441 GO:0005524(InterPro)
Cec02g1552 470 CDD STKc_IRAK 184 452 - -
Cec02g1552 470 FunFam serine/threonine-protein kinase PBS1-like 153 253 - -
Cec02g1552 470 Gene3D Phosphorylase Kinase; domain 1 155 253 - -
Cec02g1552 470 Pfam Protein kinase domain 179 387 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1552 470 Gene3D Transferase(Phosphotransferase) domain 1 254 466 - -
Cec02g1552 470 FunFam Putative receptor-like serine/threonine-protein kinase 254 466 - -
Cec02g1552 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1552 Cec-Chr2:33137914 Cec09g2350 Cec-Chr9:40323737 1.40E-149 dispersed
Cec11g1765 Cec-Chr11:31850201 Cec02g1552 Cec-Chr2:33137914 3.20E-64 dispersed
Cec02g1552 Cec-Chr2:33137914 Cec06g0424 Cec-Chr6:4794683 1.70E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71749 PF00069 Pkinase 1.40E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1552 - - - 0.0