Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1558 ATGGAAAAAGGAGATAATATTACAGCATTAATAGGGATGATTGTATTGCAAATATGCTATGCTGGTATAAATATTATCTCAAAGCTTGCCATGCAATCTGGAATGAACCCTCTTGTTCTTCTCACTTATAGACAGATTTTTGGCACTTTGGCCATTGCTCCTTTTGCCTTCTTTACTGAAAGGAAAACAAGGCCAAAGATTACTTTTACAGTTCTTATTCAAATCTTTGCGTGTTCCTTATCAGGAGCAACAGGAAACCAGATATTCTTCTTTGTCGGGTTGAAGTACACAAACCCAACAATTTCGAGTGCTATGGCCAATGTTCTTCCAGCTGCTACTTTTATTCTTGCTGTTCTTTTCAGACAAGAGAGTGTGAGAATCAAGACCAAGTCTGGTTTTGCAAAGGTAATAGGGACAATTGTGTGTGTATGTGGGGCAATGCTGCTGTCTTTCTACCATGGACACACCATTGACTTAGGTGAATCAAAAATTCACTGGCCATATGTTGAGAAAATGATGAAGGAAACAAACCCGGCCAACCATCAAGGAAACCGTGTCCTCGGCTCGATTTTGTTGCTCTTCAGCTCTTTTGCTTGGGCATTATGGTTTGTCATCCAAGCAAGATTGAGTGTGAAGTTCAAAGCTCCCTATACAAGTACTGCATTGTTGTGCTTCATGGCCTTTTTCCAATGTGGACTCATAGCTGTGATTTCAGAGCACAATATTGCTGCTTGGTCTTTGAAAAGTACGATCCGACTCGTTGCAGCTCTTTACGCGGGAGTTGTGTGCTCTGGATTGACATTTAGCATAACTTCATGGATTATACAAAGGAAAGGCCCTCTCTATGTCTCCATTTTCACCCCTTTATTGCTTATCATTGTGGCCATCGTTAGCTGGACTCTCCTCCATGAACAACTCTACGTGGGAACTGTTATTGGGTCTATTTTGATAATCATTGGGCTTTATGCTGTGCTATGGGGAAAATCCAAAGAGATGAAAGTAGAAGATGATCATGACAACATGGAAAAACCAAGAATAGAGAAGCCAAATGGAAATGGGAGTCATATTATTGAGGAGAAGGATGACATGGAATTGCAAATCACATACATCAAATAA 1116 40.32 MEKGDNITALIGMIVLQICYAGINIISKLAMQSGMNPLVLLTYRQIFGTLAIAPFAFFTERKTRPKITFTVLIQIFACSLSGATGNQIFFFVGLKYTNPTISSAMANVLPAATFILAVLFRQESVRIKTKSGFAKVIGTIVCVCGAMLLSFYHGHTIDLGESKIHWPYVEKMMKETNPANHQGNRVLGSILLLFSSFAWALWFVIQARLSVKFKAPYTSTALLCFMAFFQCGLIAVISEHNIAAWSLKSTIRLVAALYAGVVCSGLTFSITSWIIQRKGPLYVSIFTPLLLIIVAIVSWTLLHEQLYVGTVIGSILIIIGLYAVLWGKSKEMKVEDDHDNMEKPRIEKPNGNGSHIIEEKDDMELQITYIK 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33181021 33184208 + CePI673135_02g015580.1 Cec02g1558 196611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1558 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Cec02g1558 371 PANTHER WAT1-RELATED PROTEIN 12 338 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec02g1558 371 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020(InterPro)
Cec02g1558 371 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020(InterPro)
Cec02g1558 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0410 Cec-Chr1:4321752 Cec02g1558 Cec-Chr2:33181021 1.20E-33 dispersed
Cec01g1112 Cec-Chr1:17228052 Cec02g1558 Cec-Chr2:33181021 1.00E-113 dispersed
Cec02g1558 Cec-Chr2:33181021 Cec04g0647 Cec-Chr4:25239175 2.00E-71 dispersed
Cec02g1558 Cec-Chr2:33181021 Cec11g1619 Cec-Chr11:30471817 6.10E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1558 - - - 0.0