Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1579 ATGTGTTGCCAAGGTCTTCTTTTGGTTAAAAAAATCTCAGAACTTTACCACAAAATCTCCACTCTTGAAAGCCTCAAACCCTCTAAAGATGTCAACTCTCTCTTCTCTCAACTTGTTCTCATTTGCACCCCTCCCCCGTCTTCTCCGTCGTCCATCGACATCTCGGCGCTTTGCTCCGCCGTCCAAACCATGAGATCCCATCTCATCAAGCTCTGCGCCGAGGCCGAGGCGCTTCTCGAGCATCACTACTCCACCATTTTAGCCTCTCACCAAAAGCCACTTGACCATCTCTCCCTTTTCCCTTATTACTCCAACTACCTCAAACTAACCCACCTTGAATTCTCCATTTTGAACCACCACGCGCCCCACGCGCCACCCACCAAGGTGGCCTTTGTTGGCTCCGGTGCACTTCCGTTCTCGTCGATCATCATGGCCTCGAAGTACCTTCCAAAAACCGAGTTTCACAACTTCGACGTCGACCGGTCTGCCAATGCAAAAGCAGCAATGCTAGTAGCTGGCGATGGGGACCTGTCGAGGCGGATGGTGTTCCACACGACTAACATCATGGACGTTGTCTCGGACCAGTTGAGGAAGTTTGAGGTCGTATTTTTGGCAGCGTTGGTGGGAATGGAGAGGGAAGAGAAGGTGAAAGTGATTGAGCATTTGAGGAAGAATATGGGAGGTGGCGCGTTGTTGATGTTGAGGAGCGCGTATGGTGCACGCGCGTTTCTTTATCCGGTGGTGGAAGCTTGTGATCTTCGAGGATTTGAGATTCTTACAATGTTTCATCCCACGGATGAAGTTATTAATTCAATTGTGTTGGCACGATTATAA 834 49.64 MCCQGLLLVKKISELYHKISTLESLKPSKDVNSLFSQLVLICTPPPSSPSSIDISALCSAVQTMRSHLIKLCAEAEALLEHHYSTILASHQKPLDHLSLFPYYSNYLKLTHLEFSILNHHAPHAPPTKVAFVGSGALPFSSIIMASKYLPKTEFHNFDVDRSANAKAAMLVAGDGDLSRRMVFHTTNIMDVVSDQLRKFEVVFLAALVGMEREEKVKVIEHLRKNMGGGALLMLRSAYGARAFLYPVVEACDLRGFEILTMFHPTDEVINSIVLARL 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33378933 33379766 - CePI673135_02g015790.1 Cec02g1579 196632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1579 277 PANTHER NICOTIANAMINE SYNTHASE 3 8 276 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cec02g1579 277 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 277 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cec02g1579 277 Pfam Nicotianamine synthase protein 7 276 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cec02g1579 277 Gene3D Vaccinia Virus protein VP39 4 277 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1579 Cec-Chr2:33378933 Cec03g1831 Cec-Chr3:36597371 3.30E-82 dispersed
Cec02g1578 Cec-Chr2:33364221 Cec02g1579 Cec-Chr2:33378933 4.50E-83 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1579 K05953 - csv:101219339 468.774