Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1605 ATGGGGCATTTCTCCACCATGTTTAATGGGCTGGCAAGGTCATTTTCCTTCAAGAAAGGTAGAAATTCTGGGAGTCTAGGCAACGAGGGAGGGCGAGAAGCTGCAAAAGCCATGATAAAGGATGCAAAAAGGAAAGACTCGATATTATGCACCTCCGGTGTACTCAATGCAGAAGGTTCGGATACTTTTGCTTCAGTGTTCTCAAAGAAAGGCGAAAAAGGAGTAAACCAAGATTGCTGCATTGTATGGGAGGAATTTGGATGCCAAGAAGACATGATATTTTGTGGGATTTTCGATGGGCACGGACCATGGGGTCACTTTGTTGCAAAGACGGTAAGAGAATCATTGCCGCCTTCTTTGCTGTGCCATTGGCAGCAAGGACTTGCTCAAGCTTTTCTTGACCCAGAATTGGATTCAGAAAAGAAGCATCAGCGATTTGATATATGGAAGCATTCTTATTTAAGAACTTGTGCTGCCATTGATCACGAACTCGAGCGGCACCGTAAAATCGATACATTTTACAGTGGAACAACTGCCCTGTCCATTGTTAAACAGGGCGAACTGGTCGTTTTGGCCAACGTAGGTGACTCCCGAGCGGTTTTAGCTACTACTTCAGATGATGGAAGTATAGTACCGGTTCAGCTCACCGTTGATTTCAAACCAAACCTACCTCAGGAGGCTGAGCGGATAATTCAATGCAATGGGAGGGTATTTTGTTTAAGTGACGAGCCGGGAGTTCATAGGGTCTGGCTTCCCAATGAGGAAACCCCGGGATTGGCGATGTCGAGAGCCTTCGGTGATTATTGTATTAAAGAATTCGGACTCATTTCTGTGCCAGAAGTAACACATAGAAGTATAACCAGCAGAGACCAATTCATTATATTGGCCACTGATGGGGTATGGGATGTTGTCACCAACCAAGAAGCAGTGGAGATTGTATCGTCAACACCGAATCGAGCGAAATCGTCGAAATGCCTGGTCGAGTGTGCTGTTCGGGCATGGAAACGGAAGAGACGAGGCATTGCAATGGATGATATATCAGCTATCTGTCTCTTCTTCCACTCATCAGAGCAAGATGATCACCTTGTATCCACACTATAG 1101 45.59 MGHFSTMFNGLARSFSFKKGRNSGSLGNEGGREAAKAMIKDAKRKDSILCTSGVLNAEGSDTFASVFSKKGEKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKTVRESLPPSLLCHWQQGLAQAFLDPELDSEKKHQRFDIWKHSYLRTCAAIDHELERHRKIDTFYSGTTALSIVKQGELVVLANVGDSRAVLATTSDDGSIVPVQLTVDFKPNLPQEAERIIQCNGRVFCLSDEPGVHRVWLPNEETPGLAMSRAFGDYCIKEFGLISVPEVTHRSITSRDQFIILATDGVWDVVTNQEAVEIVSSTPNRAKSSKCLVECAVRAWKRKRRGIAMDDISAICLFFHSSEQDDHLVSTL 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33619241 33621027 - CePI673135_02g016050.1 Cec02g1605 196658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1605 366 Pfam Protein phosphatase 2C 87 320 IPR001932 -
Cec02g1605 366 PANTHER PROTEIN PHOSPHATASE 46 352 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec02g1605 366 Gene3D - 50 356 IPR036457 -
Cec02g1605 366 SMART PP2C_4 52 351 IPR001932 -
Cec02g1605 366 ProSiteProfiles PPM-type phosphatase domain profile. 63 353 IPR001932 -
Cec02g1605 366 SUPERFAMILY PP2C-like 59 354 IPR036457 -
Cec02g1605 366 CDD PP2Cc 63 353 IPR001932 -
Cec02g1605 366 FunFam Probable protein phosphatase 2C 34 54 355 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1605 Cec-Chr2:33619241 Cec11g0982 Cec-Chr11:16328819 7.60E-95 dispersed
Cec02g1605 Cec-Chr2:33619241 Cec03g1819 Cec-Chr3:36421521 2.40E-141 wgd
Cec02g1605 Cec-Chr2:33619241 Cec06g0491 Cec-Chr6:5509002 9.80E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1605 - - - 0.0