Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1719 ATGGATGGACTCTCAGATCTTGAGCTTGATTGCTCTGAATTTGTTGAAGTTGATCCCACTGGCAGATATGGCAGATACAATGAAATTTTGGGAAAAGGAGCTTCAAAAACAGTTTACAGAGCATTTGATGAATATGAAGGAATTGAGGTCGCTTGGAATCAAGTGAAACTTTATGATTTCTTGCAAAGTCCTGAAGATCTGGAAAGACTTTACTGTGAGATTCATCTTTTGAAGACATTGAAGCATAGAAATATAATGAAATTCTATACTTCTTGGGTTGATATTGCCAATAGAAACATCAATTTTGTTACTGAAATGTTCACTTCTGGCACTCTCAGGCAGTATAGGCTGAAGCATAAGAGAGTTAATATTAGAGCGGTGAAGCATTGGTGCAGGCAGATTTTGAGGGGGCTTCATTATTTGCATAGCCATGAGCCTCCTGTAATCCATAGAGATCTCAAGTGTGACAATATCTTTGTTAATGGGAATCAAGGGGAAGTTAAGATTGGTGATCTTGGACTTGCAGCAATCCTCAGGAAATCTCATGCTGATCATTGTGTGGGGACACCAGAGTTTATGGCTCCAGAAGTGTATGCAGAGGCATACAACGAATTAGTCGATATTTACTCATTTGGAATGTGCATTCTGGAGATGATAACTTTTGAATATCCATACAGCGAATGCACACATCCTGCTCAAATCTATAAGAAAGTCATATCTGGGAAAAAACCAGATGCCTTGTACAAAGTGAAGGATCCCGAAGTGCGGCAATTCATTGATAAGTGTTTGGCATCGGTTTCATTTAGGCTCTCGGCAGCGGAGCTTTTGAATGACCCTTTTCTTCAAATTGATAATGGTGAATACGATCTAAGACCTGTCGATTACGGAAGAGGATTGGACGACGTTTGCCCTCTTATAAGACAACCTTATCTAGAACTTCGTAGAAGTGACAGCTCCTTTTGTAATGGATATCCATATGATTATAGTTTTGAAGCTTCAAGTGAGTCAGGTTATCATCCAATTGATAATGAAACCAATGGGATTGAACTTTTTGAGTATTGTGAAGGTGAACATTCTGAGGATGTTGATATTAGCATTAAAGGGAAGATGAGAGAAGATGGTGGCATCTTCTTAAGACTTAGAATTGCAGATAAAGAAGGGCGTATCAGGAACATTTATTTCCCATTTGATGTCGAGACAGATACAGCATTAAGTGTAGCAACAGAAATGGTTGCGGAGCTTGATATTACAGATCAAGACGTGACCAGAATTGCTGATATGATTGACGGAGAAATTGCTTCCTTGGTGCCTGAATGGAGGCCAGGTCCGGGAATTGAGGAAACGCCCCGCTTTGCAAATCAAAGCTATTGTCATAATTGTTCTACTACTACTTACAGCAATGCATCAAATGGTCTCTTGTTAAGAAATCCCGAGGGAAAGAACTCAGAGGTAGCTCAATGCTGTGGACATCGGTATGCTTCGATGCATGGGCGTTTTGAGGAGATAATGTACCAAGCTGACGAGTCTGAGCATCATACAGCAGAGGGTGCACCGAATGTGTCGAGCCATTCCGATTGCCTGAATTATCCTGAAATATGGGGACATCATGAAAGCCGCGAACTTAGTTCAATGAGCTCACGACAAAGCCATTCGGATGAAGATTACGAGAAAACAGATCAACCAGTTACAGTCATGGACACAAAAGAAATGATAATGGAAAGTAAAACTGCTCCTCATACGAGACGTACGCTTAGGAGCCTGATGAATTCCCTTTCTTTCTCAGAAACCGCTTCTCCTCCAGATATTAATGAGAATGATGTCCAACAAGAAATGAGATGGATTAAAGCCAAGTACCAAATAGAATTAAGCAAGCTCAGAGATCAACAGTTAAATCTTACTTCAAAATCTTCAAGTTTTGAAGACGGGCAACAAAAAATGGAAAATGGGACTCTTCAAGGCAACCACAACCAAATCCTTGACAGGTCTGTTCAAGACACGAACCGAAGTAGTACTGGTAGCCATGTTTATATCGATAATAGCTGTTACAGTATAGACGCGCACAACCAAAGGGCTCGAAATCGCAAGGCTGTGGAGTCCCCTATTGTGGAGAAAGTTGCCACTGCCAAAAATGCCTGCACTGGTTCATTGCTTCCAAGCTCCCTTCATAGAACAATCTCTCTCCCAGTTGATGCTGTTCATATATAA 2205 40.86 MDGLSDLELDCSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDIANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLHYLHSHEPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHADHCVGTPEFMAPEVYAEAYNELVDIYSFGMCILEMITFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFIDKCLASVSFRLSAAELLNDPFLQIDNGEYDLRPVDYGRGLDDVCPLIRQPYLELRRSDSSFCNGYPYDYSFEASSESGYHPIDNETNGIELFEYCEGEHSEDVDISIKGKMREDGGIFLRLRIADKEGRIRNIYFPFDVETDTALSVATEMVAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIEETPRFANQSYCHNCSTTTYSNASNGLLLRNPEGKNSEVAQCCGHRYASMHGRFEEIMYQADESEHHTAEGAPNVSSHSDCLNYPEIWGHHESRELSSMSSRQSHSDEDYEKTDQPVTVMDTKEMIMESKTAPHTRRTLRSLMNSLSFSETASPPDINENDVQQEMRWIKAKYQIELSKLRDQQLNLTSKSSSFEDGQQKMENGTLQGNHNQILDRSVQDTNRSSTGSHVYIDNSCYSIDAHNQRARNRKAVESPIVEKVATAKNACTGSLLPSSLHRTISLPVDAVHI 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34930948 34934319 - CePI673135_02g017190.1 Cec02g1719 196772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1719 734 FunFam probable serine/threonine-protein kinase WNK9 374 458 - -
Cec02g1719 734 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Cec02g1719 734 Gene3D - 374 441 - -
Cec02g1719 734 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 377 432 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Cec02g1719 734 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1719 734 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1719 734 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Cec02g1719 734 Gene3D Phosphorylase Kinase; domain 1 10 105 - -
Cec02g1719 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g1719 734 CDD STKc_WNK 22 281 - -
Cec02g1719 734 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 630 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cec02g1719 734 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Cec02g1719 734 MobiDBLite consensus disorder prediction 539 559 - -
Cec02g1719 734 SMART serkin_6 24 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1719 734 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1719 Cec-Chr2:34930948 Cec03g0303 Cec-Chr3:3450613 1.50E-139 dispersed
Cec01g0157 Cec-Chr1:1539942 Cec02g1719 Cec-Chr2:34930948 6.40E-126 transposed
Cec02g0973 Cec-Chr2:13959840 Cec02g1719 Cec-Chr2:34930948 1.20E-93 transposed
Cec05g0074 Cec-Chr5:732156 Cec02g1719 Cec-Chr2:34930948 5.00E-128 transposed
Cec06g0999 Cec-Chr6:14618325 Cec02g1719 Cec-Chr2:34930948 1.30E-205 transposed
Cec10g0455 Cec-Chr10:5435455 Cec02g1719 Cec-Chr2:34930948 3.40E-101 transposed
Cec02g1719 Cec-Chr2:34930948 Cec06g0622 Cec-Chr6:7000913 1.20E-224 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71753 PF00069 Pkinase 1.80E-49 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1719 K08867 - csv:101219552 1362.44