Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1733 ATGGCATTGAGGTCTACAAAAAATGATGACATAGTTGAAGCGAAAACTCACCGGCGACGGTGGAGAATGGCCTTCGCGGCCATTTATTTCACCAGACTCCTCGTTTCTCTATCGAAAAAAGTCGGCGACCGCAAGTTCTTGCCATCGCTTTCATATGTTACTATTCATATGCACCTCAATGATGATGCTGATGTTGACAGTATGGATTCCGACGAGCGTTCGTTCGTCGATCGAAAAGTTTTAAGCATGATGGTGAGGGAGAAGAATTTCGAGTGTTTGGATCGATTTGGAGGTGTTGAAGGACTCACTAATCTTCTCGAAACGAACTCCGAGAACGGAATCATCGCAACTAAAGATGATCTAATTTCTAGAAAAAATACTTTCGGGACAAATACTTATTTGAAGCTCCACGGTAGAAGCTTCATGAGTTTTGTGATCGAAGCGTTTAACGATACGACGATGATTATTCTTTTGATATGTGCAGCGCTTTCCTTGGGATTTGGTATAAAACAACACGGTTGGGACGATGGATGGTACGACGGCGGCAGCATTGTCATCGCCATATTTCTTGTGGTTGTCGTTTCCGCCGTTAGCAACTTCAAGCAATCGAGGCAGTTTGAGAAGCTTTCAAATGAGAGAGACGACATAAAAATGGAGGTCACTAGAGCCAGTCGACGCAAACTTGTATCGATATTTGACATCGTCGTTGGAGACATTGTGTATTTGAAGATCGGAGATCAGATTCCTGCCGACGGAGTGTTCCTCGAAGGACATTCGCTGAAAGTCGACGAGTCTCACATGACTGGAGAGAGTGATCATGTTGAAGTAAATCATGGAAGTAATCCATTTTTGCTATCAGGAACCAAAGTGAGTGATGGTTTTGGTGTGATGATGGTTGCTTCAGTGGGAATGAACACATCCTGGGGAGAAATGATGAGTTCAATCAGGCAGGAAGTTAATGAAGTTACTCCTTTGCAAGCTCGTTTAAACAAGATGACCATGGTGATTGGGAAGCTCGGGCTGACAGTCGCCGTGCTCGTACTTCTTGTTCTTCTTATTCGCTATTTCACCAGGAGCACCGGCGAGTTCAATGGAAGCAAGACGAGGTTCAATGATATCACGAATGCAGTTCTTGACATGGTTACGACTGCGGTTACGATCGTCGTCGTAGCAATACCGGAAGGTTTGCCTCTAGCTGTTACTTTAACTTTAGCTTACTCCATGAAAAAGATGATGGCAGATAATGCAATGGTTCGGAAACTCTCTGCTTGTGAGACAATGGGCTCAGCAACAACAATTTGTACAGATAAAACTGGCACCCTTACTTTGAATGAGATGAAAGTTATAGAGTTTTGGATTGGGGAAGATGAAATTATTGACAAAAATGTTTCCAATTCAAGGATTGTGACTGAGGTTGTTGAATTGCTGCACCAAGCAGTTGGCTTGAATACAACTGGTAGTGTTCAAAGATCATCTTCTTCATTACCTCTAGAAATATTCGGGAGTCCGACTGAGAAAGCGATACTTTCTTGGGGCGTATTCGACTTGGATTTGAACCTACATGAATTGAAGAAGCAACATGAAATAATCCAAGTGGAGACTTTCAGTTCAGAGAAAAAGAGAAGCGGAGTTTCGGCAAGACGATACGGCGACAAGTTTATCCATACACATTGGAAGGGAGCAGCAGAGATGATATTGACAATGTGCTCATATTATTACAATAAACAAGGAACAGTTAGAGCCATTGATGACGAAGCAAGAAGACGATGGATTGCGACAATCACAACTATGGCAGGTAGAAGTCTCCGATGCATCGCCTTCGCCCTCAAACTGAATGAACACAGCGAAAATGCAGAAGTTCCAACGAAACTCGACGAATCGGGATTGACATTGCTCGGAATAGTCGGTTTGAAGGATCCTTGCAGGCCAGGAGTTAGAGAAGCAATAGAATCATGTAAAGCTGCAGGAGTGAACATCAAAATGGTAACAGGTGATAACTTACACACAGCAACAGCCATAGCAATCGAATGTGGAATACTAAATCCCGATGACAATACGAACAGTGACGAAGTTGTAATCGAGGGCGTAAGATTTAGAAACTACACACCTGAGGAGAGAGTAGAAAAGATTGGGAACATCAAAGTAATGGCTAGATCTTCCCCATTTGACAAGCTTCTTATGGTACAATGCTTGAAGAATTTAGGCCATGTAGTGGCAGTCACAGGGGATGGAACAAATGATGCCCCTGCTCTTCATGAGGCAGACATTGGTCTTTCCATGGGGATTCAAGGAACTGAAGTGGCAAAGGAGAGTTCGGATATCGTCATCTTAGACGACAACTTTACGTCAGTCGTCACGGTTTTGAAATGGGGAAGATGTGTTTACAACAACATCCAAAAGTTCATTCAATTTCAGCTCACAGTGAATATTGCAGCATTGATAGTGAACTTCATTGCTGCTTTGTCTTCTGGCAAAGTCCCTTTAACAACAGTTCAACTATTATGGGTGAATCTCATAATGGACACCATGGGAGCTTTAGCCTTAGCCACTGAGCTACCCACCAATGATCTCATGGCGAAAACACCTGTCGGTCAAAAAGAACCGTTGGTGACGAAAGTCATGTGGAGGAACCTCATTGCACAGGCTGTGTATCAAGTGACAGTCTTGTTGGTTTTGGAATTTAAAGGAAGTGCCATCTTGAATGTAAATGGAAAGGTAAAGAACACACTCATTTTCAATACTTTTGTGCTATGCCAAATCTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAAGAATATATTTGAAGGGATACATAAAAGCAAGCTGTTTTTGGGAATAGTTGTGATAACTTTGGGTTTTCAAGTGGTAATGGTGGAGCTTTTGGGAAGGTTTGCAAATACTGAGAAGTTGAATTGGGGCCAATGGGGAGTATGTATTGGCATTGCAGCTTTGTCTTGGCCAATTGGATGGCTTTCCAAGTTAATACCAGTTTCTGCCCTTCACTTTCCAAGGAGAACAAATTCAGCACCATAA 3036 42.69 MALRSTKNDDIVEAKTHRRRWRMAFAAIYFTRLLVSLSKKVGDRKFLPSLSYVTIHMHLNDDADVDSMDSDERSFVDRKVLSMMVREKNFECLDRFGGVEGLTNLLETNSENGIIATKDDLISRKNTFGTNTYLKLHGRSFMSFVIEAFNDTTMIILLICAALSLGFGIKQHGWDDGWYDGGSIVIAIFLVVVVSAVSNFKQSRQFEKLSNERDDIKMEVTRASRRKLVSIFDIVVGDIVYLKIGDQIPADGVFLEGHSLKVDESHMTGESDHVEVNHGSNPFLLSGTKVSDGFGVMMVASVGMNTSWGEMMSSIRQEVNEVTPLQARLNKMTMVIGKLGLTVAVLVLLVLLIRYFTRSTGEFNGSKTRFNDITNAVLDMVTTAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADNAMVRKLSACETMGSATTICTDKTGTLTLNEMKVIEFWIGEDEIIDKNVSNSRIVTEVVELLHQAVGLNTTGSVQRSSSSLPLEIFGSPTEKAILSWGVFDLDLNLHELKKQHEIIQVETFSSEKKRSGVSARRYGDKFIHTHWKGAAEMILTMCSYYYNKQGTVRAIDDEARRRWIATITTMAGRSLRCIAFALKLNEHSENAEVPTKLDESGLTLLGIVGLKDPCRPGVREAIESCKAAGVNIKMVTGDNLHTATAIAIECGILNPDDNTNSDEVVIEGVRFRNYTPEERVEKIGNIKVMARSSPFDKLLMVQCLKNLGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNIAALIVNFIAALSSGKVPLTTVQLLWVNLIMDTMGALALATELPTNDLMAKTPVGQKEPLVTKVMWRNLIAQAVYQVTVLLVLEFKGSAILNVNGKVKNTLIFNTFVLCQIFNEFNARKMEKKNIFEGIHKSKLFLGIVVITLGFQVVMVELLGRFANTEKLNWGQWGVCIGIAALSWPIGWLSKLIPVSALHFPRRTNSAP 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35090283 35093318 - CePI673135_02g017330.1 Cec02g1733 196786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1733 1011 Gene3D - 444 640 IPR023299 GO:0000166(InterPro)
Cec02g1733 1011 SFLD p-type atpase 416 794 IPR044492 -
Cec02g1733 1011 FunFam Calcium-transporting ATPase 635 786 - -
Cec02g1733 1011 PRINTS P-type cation-transporting ATPase superfamily signature 434 448 - -
Cec02g1733 1011 PRINTS P-type cation-transporting ATPase superfamily signature 741 760 - -
Cec02g1733 1011 PRINTS P-type cation-transporting ATPase superfamily signature 633 644 - -
Cec02g1733 1011 PRINTS P-type cation-transporting ATPase superfamily signature 655 665 - -
Cec02g1733 1011 PRINTS P-type cation-transporting ATPase superfamily signature 263 277 - -
Cec02g1733 1011 PRINTS P-type cation-transporting ATPase superfamily signature 765 777 - -
Cec02g1733 1011 FunFam Calcium-transporting ATPase 758 1000 - -
Cec02g1733 1011 FunFam Calcium-transporting ATPase 193 316 - -
Cec02g1733 1011 NCBIfam calcium-translocating P-type ATPase, PMCA-type 82 998 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Cec02g1733 1011 Coils Coil 206 226 - -
Cec02g1733 1011 NCBIfam HAD-IC family P-type ATPase 378 470 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec02g1733 1011 NCBIfam HAD-IC family P-type ATPase 707 821 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec02g1733 1011 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 441 637 IPR023299 GO:0000166(InterPro)
Cec02g1733 1011 Pfam E1-E2 ATPase 217 412 - -
Cec02g1733 1011 SFLD C1.7: P-type atpase like 416 794 - -
Cec02g1733 1011 ProSitePatterns E1-E2 ATPases phosphorylation site. 436 442 IPR018303 -
Cec02g1733 1011 Pfam haloacid dehalogenase-like hydrolase 432 755 - -
Cec02g1733 1011 Pfam Cation transporter/ATPase, N-terminus 97 164 IPR004014 -
Cec02g1733 1011 Gene3D - 147 993 - -
Cec02g1733 1011 SUPERFAMILY HAD-like 432 845 IPR036412 -
Cec02g1733 1011 PANTHER CATION TRANSPORTING ATPASE 77 999 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Cec02g1733 1011 Gene3D - 119 316 - -
Cec02g1733 1011 Gene3D - 431 786 IPR023214 -
Cec02g1733 1011 PRINTS H+-transporting ATPase (proton pump) signature 741 757 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec02g1733 1011 PRINTS H+-transporting ATPase (proton pump) signature 773 798 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec02g1733 1011 PRINTS H+-transporting ATPase (proton pump) signature 590 608 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec02g1733 1011 Pfam Cation transporting ATPase, C-terminus 826 996 IPR006068 -
Cec02g1733 1011 SUPERFAMILY Calcium ATPase, transduction domain A 218 314 IPR008250 -
Cec02g1733 1011 SUPERFAMILY Calcium ATPase, transmembrane domain M 97 999 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0291 Cec-Chr2:2680177 Cec02g1733 Cec-Chr2:35090283 1.40E-12 dispersed
Cec02g0292 Cec-Chr2:2682040 Cec02g1733 Cec-Chr2:35090283 2.50E-79 dispersed
Cec02g0293 Cec-Chr2:2687858 Cec02g1733 Cec-Chr2:35090283 7.50E-108 dispersed
Cec02g1733 Cec-Chr2:35090283 Cec11g1193 Cec-Chr11:24541914 1.70E-285 dispersed
Cec02g1733 Cec-Chr2:35090283 Cec09g0715 Cec-Chr9:6449927 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1733 K01537 - csv:101218531 1752.64