Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1774 ATGGAACCCAATGAAAACCAGCTCAGCTCCTACTTCCACCACCATCAACACCACCATCAGAGTCCCACCACATCGCCGACCAATGGCCTTTTACCACCCACCCACCACCTCTCCTCCGCCGCCGCCGCCTCCGACGGCGGCCCTCATGTCGTATACCCTCACTCTGTCCCTTCCGCCGCCGTGTCCTCGTCTCCTCTCGAGCCCGCACGCCGGAAGAGAGGCCGGCCGAGGAAGTACGGCACGCCGGAAGAAGCTTTAGCGGCTAAAAAAGCTGCTACGGCGTCGTCTCACTCTTCGTCCTCTAAGGCTAAGAAGGAACTCGCTTCTTCTTCTTCCCTTAATGCCGTTTCCGCTTCTTCTTCCTTCTCCGCGCCTTCCAAAAAATCTCAGTTGGCTGCACTTGGTAATGCAGGCCAAGGTTTTGCGCCACATGTTATTAATGTGGCAGCTGGTGAGGATGTGGGCCAGAAAATTATGATGTTTATGCAACAATGTAAGCGTGAAATTTGTATCCTTTCTGCATCTGGTTCAATCTCCAATGCATCTCTCCGTCAGCCAGCCGCATCCGGAGGCAATATTGCATATGAGGGTCGTTTTGAGATTGTTTCGTTATGCGGATCTTATGTACGAACTGACCTCGGAGGAAAGACGGGTGGTCTTAGTGTATGTCTATCAAGTGCTGAAGGCCACATCATAGGAGGGGGAGTTGGTGGGCCGTTGAAGGCTGCTGGACCCGTGCAGGTTATTGTTGGAACCTTCGTAATCGACCCCAAGAAGGAAGTTGGTGGTGGTAAAGGCGATGCCTCTGCTGGCAAGTTGTCCTCACCTATTGGTGGGACATCGATGTCAAATCTACGCTATGGCTCCAACATTGACTCGGGAGGTAATCATGTAAGGGGAAATGATGAACACCAAGGTCTTGGAGAGAGTCATTTTTTGCTTCAGCCCCGGGGAGTGAATCTGACATCACCGCGATCAACGGATTGGAGAATGAGTCTGGATGCCACAAACACTGCTTATGATTTGACAGGAAGAACAGGCCATCATTCTCCCGAAAACGGAGATTACGATCAGATTCCTGATTGA 1086 51.84 MEPNENQLSSYFHHHQHHHQSPTTSPTNGLLPPTHHLSSAAAASDGGPHVVYPHSVPSAAVSSSPLEPARRKRGRPRKYGTPEEALAAKKAATASSHSSSSKAKKELASSSSLNAVSASSSFSAPSKKSQLAALGNAGQGFAPHVINVAAGEDVGQKIMMFMQQCKREICILSASGSISNASLRQPAASGGNIAYEGRFEIVSLCGSYVRTDLGGKTGGLSVCLSSAEGHIIGGGVGGPLKAAGPVQVIVGTFVIDPKKEVGGGKGDASAGKLSSPIGGTSMSNLRYGSNIDSGGNHVRGNDEHQGLGESHFLLQPRGVNLTSPRSTDWRMSLDATNTAYDLTGRTGHHSPENGDYDQIPD 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35577057 35583029 - CePI673135_02g017740.1 Cec02g1774 196827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1774 361 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 34 269 IPR039605 GO:0003680(InterPro)
Cec02g1774 361 ProSiteProfiles PPC domain profile profile. 137 278 IPR005175 -
Cec02g1774 361 MobiDBLite consensus disorder prediction 341 361 - -
Cec02g1774 361 CDD DUF296 143 253 IPR005175 -
Cec02g1774 361 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 253 IPR005175 -
Cec02g1774 361 Gene3D - 143 262 - -
Cec02g1774 361 MobiDBLite consensus disorder prediction 1 105 - -
Cec02g1774 361 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1774 Cec-Chr2:35577057 Cec08g0955 Cec-Chr8:21395096 2.60E-39 dispersed
Cec02g1771 Cec-Chr2:35542995 Cec02g1774 Cec-Chr2:35577057 6.40E-20 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1774 - - - 0.0