Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1786 ATGGCTTCCTCACTCACTTCTTTGTTCATTTCTCGCCGGACTGATATGAGACTCACCAACTCCCTCCCGGACCTCCATAGCCACCGCCGTAACCACCCGCCGGAGACCGAAGCCTCTCAACTCCATCACCACCAACTTCAGACCTCCCTCTTCCATCCCTCTTCCTTCTCTTCCGACGATTTCCTCGACCAAATCCTCTCCGCCGCCCCTTCTCCCTGGGAACTCCCCGCCGGCCTCCCAAATCCTCACTCCGACCTCCCTCCCCAACCACTTCCGTCATCTAATCCCGACAATGTCGCGTTTCAGATCGGCGACACAACTCCGGCGGCCAAAATGGCCATGGCCTTGCTTCAACAGCAGTTGCTCATGTCGAGAGGAATCACCGCTGCCGATGATTCCGGTCTCCTTCCAATGCCTGGTAACGACGTCGTTGAAATAGAAGGCTCTTCGTCTTTCAAATGCCCTAATCCGATTGATCACGGTTCCATCATTCCCTCTCTCTTCAACGAATTCGCCGAATTTCTGAACGCCTCCGGTTCCGGCCATAACCAGAATCAATCTCAGGGGAACTCAAACTCTCAGAAACAGAACTTCGGAGCTCCGGTATCAGTCAGCAGTCCACCTCCGACAGGTCCTAACTCCGGCGTTGGTGCTGCACCACCGGCTCAGCCGCGGCAGAGAGTCAGAGCTCGGAGAGGACAAGCCACAGATCCTCATAGTATAGCAGAAAGATTACGAAGAGAGCGAATTGCGGAGAGAATGAAAGCACTACAAGAACTGGTTCCCAACGCCAACAAGACAGACAAGGCTTCAATGCTGGATGAGATCATAGACTATGTAAAGTTTCTCCAGCTTCAAGTCAAAGTTCTGAGTGTCAGCAGGTTGGGCGGTGCCACTGCAGCCATGCCTTCCCTTCAACCTGATCTTTCCACTGAGGGTGGCACTGAGTGCAACCAGTCCAACGGAACCGGTGGGACCGGCGGACAGGCTTCAGCCGAAGCTCCGTCGAGTAACGACGCGATGACGGTGACGGAACATCAGGTGGTGAAGTTAATGGAGGAGGACATGGGCTCCGCCATGCAGTACTTACAAGGCAAAGGCCTTTGCCTCATGCCCATCTCTCTCGCCACCGCTATCTCCGCCGCCACGTGTCACAGCCGCCCAACCACGGCGTCGAAGGTCAGAGGAGATGCTCCCACCTCTCCTAGTCTGTCGGCGTTGACCGTTCAGTCAACTACCTTGGGTAACGGCACGGTGGACAGAACCGTCAGAGACTCCGTCTCCGTTTCACGGCCGCCGTGA 1302 55.68 MASSLTSLFISRRTDMRLTNSLPDLHSHRRNHPPETEASQLHHHQLQTSLFHPSSFSSDDFLDQILSAAPSPWELPAGLPNPHSDLPPQPLPSSNPDNVAFQIGDTTPAAKMAMALLQQQLLMSRGITAADDSGLLPMPGNDVVEIEGSSSFKCPNPIDHGSIIPSLFNEFAEFLNASGSGHNQNQSQGNSNSQKQNFGAPVSVSSPPPTGPNSGVGAAPPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSVSRLGGATAAMPSLQPDLSTEGGTECNQSNGTGGTGGQASAEAPSSNDAMTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISLATAISAATCHSRPTTASKVRGDAPTSPSLSALTVQSTTLGNGTVDRTVRDSVSVSRPP 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35711070 35716758 - CePI673135_02g017860.1 Cec02g1786 196839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1786 433 MobiDBLite consensus disorder prediction 75 94 - -
Cec02g1786 433 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 232 292 IPR036638 GO:0046983(InterPro)
Cec02g1786 433 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 234 283 IPR011598 GO:0046983(InterPro)
Cec02g1786 433 MobiDBLite consensus disorder prediction 304 340 - -
Cec02g1786 433 MobiDBLite consensus disorder prediction 178 212 - -
Cec02g1786 433 MobiDBLite consensus disorder prediction 389 433 - -
Cec02g1786 433 MobiDBLite consensus disorder prediction 178 246 - -
Cec02g1786 433 MobiDBLite consensus disorder prediction 73 94 - -
Cec02g1786 433 Pfam Helix-loop-helix DNA-binding domain 239 284 IPR011598 GO:0046983(InterPro)
Cec02g1786 433 SMART finulus 240 289 IPR011598 GO:0046983(InterPro)
Cec02g1786 433 MobiDBLite consensus disorder prediction 230 246 - -
Cec02g1786 433 MobiDBLite consensus disorder prediction 22 44 - -
Cec02g1786 433 Gene3D - 229 291 IPR036638 GO:0046983(InterPro)
Cec02g1786 433 MobiDBLite consensus disorder prediction 22 39 - -
Cec02g1786 433 FunFam Transcription factor bHLH66 231 296 - -
Cec02g1786 433 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 40 378 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1786 Cec-Chr2:35711070 Cec08g0939 Cec-Chr8:21204990 4.40E-17 dispersed
Cec03g1393 Cec-Chr3:31140947 Cec02g1786 Cec-Chr2:35711070 4.00E-12 transposed
Cec03g1702 Cec-Chr3:35268284 Cec02g1786 Cec-Chr2:35711070 4.40E-43 transposed
Cec06g1407 Cec-Chr6:27561354 Cec02g1786 Cec-Chr2:35711070 2.90E-82 transposed
Cec07g0048 Cec-Chr7:548731 Cec02g1786 Cec-Chr2:35711070 2.10E-16 transposed
Cec07g1787 Cec-Chr7:33520530 Cec02g1786 Cec-Chr2:35711070 2.80E-09 transposed
Cec08g0232 Cec-Chr8:4286171 Cec02g1786 Cec-Chr2:35711070 1.80E-12 transposed
Cec09g0432 Cec-Chr9:3691835 Cec02g1786 Cec-Chr2:35711070 5.40E-12 transposed
Cec09g0720 Cec-Chr9:6507935 Cec02g1786 Cec-Chr2:35711070 2.30E-44 transposed
Cec10g1747 Cec-Chr10:32164738 Cec02g1786 Cec-Chr2:35711070 8.60E-14 transposed
Cec02g1786 Cec-Chr2:35711070 Cec04g1946 Cec-Chr4:37775630 9.20E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29083 PF00010 HLH 1.60E-09 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1786 - - - 0.0