Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1796 ATGTGTGTGACGGATGCAGAGCAGGTTGGGACTGAGAGACCAACTTCTGGGGTTAATAATACCAAGCCATGGCCAATACATTGTGAATTTTTGCAGAATCAGATGGGGAATCCTGATAAGGAGCCTGCTCTAACTGGAACTAGCGACCAAACTCGCTCTGGGAATTCTTTTCCTTTAGAAAGCATATCTGAGGATGCTGCAGTTATAGACAGGAAAGAGAACCCATCTACTTTTGTTCCAGCTCTTAGATCAGGAGAATGGTCTGACATCGGAAAGCGTCCTTATATGGAGGACACTCATGTATGCATTCATGACATGGCTAAGAAGTTTGGCTGTAGCTTTCTTAATGAGGAAGCTGTCTCCTTCTATGGTGTATTTGACGGTCATGGAGGAAAAGGTGCTGCACAGTTTGTTCGTGACCACTTGCCGAGAGTCATTGTTGAAGATTCTGACTTTCCTTTAGAACTTGAAAAGGTCGTCACAAGGTCATTTATGGAGACTGATGCAGCTTTTGCTAGATCTTGCACTCTTGAAACATCTCTATCTTCTGGCACAACTGCCCTGACTGCAATGATATTTGGAAGGTCTTTGCTTGTAGCAAATGCTGGCGATTGCCGAGCAGTATTGTCAAGACAAGGATGTGCAGTAGAAATGTCCAAAGACCACAGGCCATGCTGCACAAAAGAAAGAAAGCGAATCGAGGCCTTGGGCGGATTCATTGATGATGATTACCTAAACGGCCTGCTTGGTGTTACACGTGCGATAGGAGATTGGCATCTTGAAGGAATGAAGGAAATGAGTGAAAGAGGTGGACCATTAAGTGCAGAACCTGAACTTAGATTAATGACATTGACAAAGGAAGACGAGTTCTTGATCATAGGTAGTGATGGAATATGGGACGTCTTCACGAGTCAAAACGCTATCGATTTTGCTCGGAGGAGGCTCCAAGAGCACAATGATGTGAAAATTTGCTGCAAAGAAATAGTGGAGGAAGCCATAAAGAGAGGAGCAACAGACAATTTAACAGTAGTGTTGGTTAGCTTTCATTTGGAACCTCCTCCACCTGTAGTTTTTCAAAGGCCAAGATTTAGAAGAAGCATTTCTGCTGAGGGACTTCAGAACCTCAAATTTCTTCTAGAAGGATAG 1146 43.72 MCVTDAEQVGTERPTSGVNNTKPWPIHCEFLQNQMGNPDKEPALTGTSDQTRSGNSFPLESISEDAAVIDRKENPSTFVPALRSGEWSDIGKRPYMEDTHVCIHDMAKKFGCSFLNEEAVSFYGVFDGHGGKGAAQFVRDHLPRVIVEDSDFPLELEKVVTRSFMETDAAFARSCTLETSLSSGTTALTAMIFGRSLLVANAGDCRAVLSRQGCAVEMSKDHRPCCTKERKRIEALGGFIDDDYLNGLLGVTRAIGDWHLEGMKEMSERGGPLSAEPELRLMTLTKEDEFLIIGSDGIWDVFTSQNAIDFARRRLQEHNDVKICCKEIVEEAIKRGATDNLTVVLVSFHLEPPPPVVFQRPRFRRSISAEGLQNLKFLLEG 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35831446 35836416 + CePI673135_02g017960.1 Cec02g1796 196849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1796 381 CDD PP2Cc 83 348 IPR001932 -
Cec02g1796 381 MobiDBLite consensus disorder prediction 1 58 - -
Cec02g1796 381 FunFam Probable protein phosphatase 2C 22 67 351 - -
Cec02g1796 381 Pfam Protein phosphatase 2C 95 340 IPR001932 -
Cec02g1796 381 ProSiteProfiles PPM-type phosphatase domain profile. 83 348 IPR001932 -
Cec02g1796 381 PANTHER PROTEIN PHOSPHATASE 2C 72 348 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cec02g1796 381 Gene3D - 66 351 IPR036457 -
Cec02g1796 381 ProSitePatterns PPM-type phosphatase domain signature. 122 130 IPR000222 GO:0043169(InterPro)
Cec02g1796 381 SMART PP2C_4 73 346 IPR001932 -
Cec02g1796 381 SUPERFAMILY PP2C-like 73 349 IPR036457 -
Cec02g1796 381 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1796 Cec-Chr2:35831446 Cec11g1929 Cec-Chr11:33458689 1.10E-88 dispersed
Cec02g1796 Cec-Chr2:35831446 Cec09g0479 Cec-Chr9:4063707 2.30E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29085 PF00481 PP2C 7.10E-67 CL0238 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1796 K14803 - csv:101210349 726.087