Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1820 ATGTCCTGGGTCAGAGTTGACGTGCTTTGTCTTTTGAGCAGGAGGTTCAATGTTGGATTCTTCAACCTCCTCCACTTTCTCAAACAAACCATTTTCATTTTTAACAAACAAACCAAAACCTCTTCGCTTCCCCTTTCACTCCTCATTTTCGCCAGATGTCTTCTTAATTTTGTGGAGCTGAAGAGTAAATGGGGAGCTGTTTGTCTACTGGCAATCAGAATAGTTGCAGAAGTGGAAGGAATGGAGAGAGAGTTTCTGGATCCTGTTTGGGAATTGGAACTTGTTTATAATGGGAAGTCTCGAAATTCTTGTATTTTCACTCAGCAGGGTCGAAAGGGTATAAACCAAGACGCTATGGTTGTATGGGAAGACTTCATATCAGATGGTGCAATTTTCTGTGGGGTATTTGATGGCCACGGTCCTCATGGTCATGTCGTTGCACGAAAAGTTAGAGATGTTCTGCCGAGAAAGCTAGTGTCATTCTGGCAGTCATCTCAGTTGAAGCATAATAGATCAGATAGAACTTCTTGTCTCCCGTGGAGTCAGAAGGATTCAGCAGATGGTGAAGGACAGAACATAGATGCCTCAGAGGAGGATAAATCAAGTTCTTTATGGAGAAGAGCTTTCCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAGTCTCATCCCAAATTGGACTGTTTCTGTAGTGGCAGTACCGCAGTTACTCTAGTGAAGCAGGGCTCAGATCTATTTGTGGGAAGTATCGGGGATTCTCGAGCGATTCTTGGATCTAAAGACAGCAGTGATTCCCTTGTAGCAACCCAGCTGACAGTAGATCTAAAGCCTGATTTACCCAGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTATTTGCATTGCACGACGAGCCAGAAGTGCCAAGAGTGTGGCTGCCATTTGACAATGCACCTGGATTAGCAATGGCTCGAGCATTTGGCGACTTCTGTTTGAAGGACTATGGAGTTATCTCTATCCCTGAGTTCTCACACCGTATGCTTACAAATAATGATTTGTTTGTTGTCCTTGCTTCAGATGGGGTTTGGGACGTATTGAGCAATGAAGAGGTGGTTGAGATAGTCTATTCTGCCTCAACTCGGTCATCGGCAGCCCGAATGGTGGTAGACTCAGCTGCTCGAGAGTGGAAACTCAAGTATCCTACTTCGAAAATGGATGACTGTGCTGTCGTCTGCCTATTCTTGGACGGGAAAGTGGATTCAGAATCAGAAAATGAAGAACAAGCTTCTTCTGCAACTCTTCAAACCAATCAAATGGGTCACACCGCAGAATCAGATGATGAGCAGCAGAGGTCTGAGCCAAGTTTGCAAAGGAATTTTACGGTCCGATCGTCAGAAGAAAAAGACCAAATTGGAGGATTATCTTCTTCACATAATGAAGAGAATGGAGAACCAAAATCTGCTGAAGATGATAATTGGTTGGGACTGGAGGGTGTAACAAGAGTAAACTCTTTGGTTCAACTCCCTAGATTTTCTTGA 1521 43.72 MSWVRVDVLCLLSRRFNVGFFNLLHFLKQTIFIFNKQTKTSSLPLSLLIFARCLLNFVELKSKWGAVCLLAIRIVAEVEGMEREFLDPVWELELVYNGKSRNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGVFDGHGPHGHVVARKVRDVLPRKLVSFWQSSQLKHNRSDRTSCLPWSQKDSADGEGQNIDASEEDKSSSLWRRAFLKSYKAMDKELKSHPKLDCFCSGSTAVTLVKQGSDLFVGSIGDSRAILGSKDSSDSLVATQLTVDLKPDLPREAERIKKCKGRVFALHDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRMLTNNDLFVVLASDGVWDVLSNEEVVEIVYSASTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKVDSESENEEQASSATLQTNQMGHTAESDDEQQRSEPSLQRNFTVRSSEEKDQIGGLSSSHNEENGEPKSAEDDNWLGLEGVTRVNSLVQLPRFS 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36009078 36013155 - CePI673135_02g018200.1 Cec02g1820 196873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1820 506 CDD PP2Cc 108 409 IPR001932 -
Cec02g1820 506 PANTHER PROTEIN PHOSPHATASE 104 408 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec02g1820 506 MobiDBLite consensus disorder prediction 173 189 - -
Cec02g1820 506 Gene3D - 94 411 IPR036457 -
Cec02g1820 506 MobiDBLite consensus disorder prediction 173 199 - -
Cec02g1820 506 MobiDBLite consensus disorder prediction 416 489 - -
Cec02g1820 506 ProSiteProfiles PPM-type phosphatase domain profile. 102 409 IPR001932 -
Cec02g1820 506 FunFam probable protein phosphatase 2C 52 93 412 - -
Cec02g1820 506 MobiDBLite consensus disorder prediction 448 475 - -
Cec02g1820 506 MobiDBLite consensus disorder prediction 420 437 - -
Cec02g1820 506 Pfam Protein phosphatase 2C 193 386 IPR001932 -
Cec02g1820 506 SUPERFAMILY PP2C-like 100 411 IPR036457 -
Cec02g1820 506 SMART PP2C_4 91 407 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1820 Cec-Chr2:36009078 Cec06g0491 Cec-Chr6:5509002 3.60E-79 dispersed
Cec03g1062 Cec-Chr3:21930953 Cec02g1820 Cec-Chr2:36009078 8.60E-100 transposed
Cec04g0794 Cec-Chr4:27591968 Cec02g1820 Cec-Chr2:36009078 4.40E-89 transposed
Cec05g1954 Cec-Chr5:31625478 Cec02g1820 Cec-Chr2:36009078 5.20E-76 transposed
Cec08g0461 Cec-Chr8:13581212 Cec02g1820 Cec-Chr2:36009078 1.30E-107 transposed
Cec10g0367 Cec-Chr10:4408085 Cec02g1820 Cec-Chr2:36009078 6.40E-111 transposed
Cec11g0982 Cec-Chr11:16328819 Cec02g1820 Cec-Chr2:36009078 1.70E-108 transposed
Cec02g0128 Cec-Chr2:1347572 Cec02g1820 Cec-Chr2:36009078 6.30E-140 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1820 - - - 0.0