Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1848 ATGTTCTTTCTTGTTCAGATTCTGGAAGATTGGACTTTAGAAATTCGTTCCAGTGTTTTTTCTCAACGTCTGCGTTTCTGGGCTGCAAAAATGGGTTGTCAGTGTTCCAAGCCTTCTATTGATGAAGATGGCAAAAACAGAGCCTCTGAGAAATTTCCTTCACGAAAGGGTTCACGAGATAATTTATTAAAAAAAGGAGAGGATATGCGATTGAATTCTGTGAAAAGAGACGAAGATGTTCGAATAAATTCCTCACAGAGAGCAGATAGTATTCGATCAAAGGTGAAAACGGATGGTGTTGACATGAAACTTGCTTATTTGGACAAGAGAGTCAACGGCTCTAACAGGGTACACGATGATCAAATTGAAAAAAAGAAGAGGGAGAGGTTGGAAGCTGCCATTTCTGCTAATTATCCTGGAAAAGGAAGCATTCCAAAGGCTATGGAAGCGGAGCAAGTTGCAGCTGGTTGGCCAAGCTGGCTCTCCTCTGTGGCCGGTGAAGCGCTCGAGGGATGGCTGCCACGGAGAGCCGAAACTTTCGAGAAACTCGACAAGATAGGACAAGGCACATATAGTAGCGTTTACAAGGCTCGTGATATCATTCAAAATAAACTAGTCGCTCTAAAGCGAGTTCGATTCGATAATCTTGATGTGGAGAGTGTGAAGTTTATGGCCCGGGAAATCCTTATCCTGCGTAGGCTTGATCATCCAAATGTTATAAAATTGGAAGGCTTGATTACATCACCGCGATCATGTAGCTTGTACCTCGTTTTTGAGTATATGGAGCATGACCTTACAGGCCTTGCATCTCGGCCTGGGGTCAAGTTCAGCGAACCACAGGTTAAATGCTATATGCAACAACTTCTAAGGGGGCTTAATTATTGCCACAGTCGTGGTGTCCTCCACCGCGATATAAAGGGTTCAAATCTCCTAATTGACGACAATGGCATCTTGAAGATTGCAGATTTTGGATTAGCAAGCCCTTTTGACCCCCATAATCAAGTTCCCTTAACAAGCCGTGTAGTGACTCTATGGTACCGACCACCTGAACTTCTGCTTGGAGCTTCTTATTATGGGGTTGCAGTGGACCTGTGGAGTACGGGTTGCATACTAGCGGAGCTATATTCTGGGAAGCCTATCTTACCTGGAAAAACTGAGGTCGAACAGTTGCACAAGATATTTAAACTTTGTGGGTCGCCGCCTGAGAATTATTGGAAGAAATTGCAATTACCTCATTCAACTGGATTTAAGACGGCTCAGCCATACCGACGTTGTATCGGGGAAATGCTCAAGGATTTCCCACCATCTGCGGTGGCTCTTGTGGATAAGTTGCTTTCTATAGATCCTGCTCATCGGGGAACAGCAGCTGCTGCTCTAAAGAGCGAGTTTTTTACGACTAAACCTCTTGCTTGTGAGCCTACGAGTCTGCCCAAATATCCTCCCAGCAAAGAGATTGATGCAAAATTCCCTGGCTGCAGAAGGCAGTCAAGAGCTGAGGGCAAAGACCCTAAAGATTATGTGGAAGGGAGGCGACCTAAAGAAGCTCACATTAATCTTTCTCTGAATGCTAAGGATGAAGTAAACATGTCAATGCAGAAAAGGCAAGGTTATTCAAGTTTTAAGGGCCGGGGCGGAGTGTTGAATCCGCATGGGGATGAGACAGTTTCTGGTTTTTTGATTCCTCCGCCCAAACAAAATCAATCTGTCACAGAAATTTGCTCAGATACAGGCCGGATTTCGCATTCAGGACCGCTAATTAGCAAACCAGATTGGATGAAATCTAGGAAACAACTCGATGACCATTCGATGGCGCTCGATGGATCCAATCTCTCAGTATTATCCCATTTAGTAGCAACGAGGTCTAATATATCTGATCATCCCTATGATAGACCGGGTCCATCACAATCAGAAGTAGGCAGATTGCCTGACTTCGTCAGGGATTCAGAGTCAACAAGAAAGCAGGACCGAGTATTTTATACACACCGAGTTGCGGATTCATATCGAATAGAGAACGAAAAAGTTTGTGCTAAAGAACAGTCCCTGCTTGCTTATGGGACAGACATGAACAAGCTTTATACTTCTGGTCCAATCCTTGGTCCATCAAACAACTTAGATAAAATTCTGAAAGAGCGAGACCGTCAGATTCAAGAATACGCTCGACAAGCACGACACGGTAAAGCTTCTAACAGTCAGTTAAAGAGTTCAAGAGCAACAACTGGAAAACATCTGATGCCGAGCCATGGAATCGACGTGTTCCACGAACAACCAGACTTCCAAATCGAACGGAGAAAAATCAAGCTACTCGTCGGGAATCGGAGCTTCGACGGAAGTTTTCAAATGTCCGACATATCGGCTAGTTTCATCGACATATTTCCAGAAGAATCCGACTACCCACCGGAGAGTTCATATGATTCTAGGGAAGAAGGAGATCAGAATGGAGAAACTTCTTCAATCGTTAAAGAAAACAGAGCTTTCTGGAAATCGCAAAAAGAAGTTCTTCAGGCGACTTTGAGAAGAACGAATTCGATTGAGTTAGAAATCCGGCAAGCAACGAAAAATGCACTCAGAGAAATGGATTTCAAGTCCATTCAATGTGGTTGCCGGAGAGCGGCGGAAGTTGCGGTGTGTCGGGAGTGCGTACAGAGAGAAGTATGCAATCATTTGAGAAACGCCGGTTACAATTGCGCCGTTTGTAAGTCTAAATGGAAAAGCTCACCGGAAATTCCATCAGGGGAGCACAGTTATTTGGAAGTGGTCGACGATTGTGATCCGAATGATAGAGTGATAATCGAGCTGAATTTTAGAGCGGAATTCGAAATAGCTAGAGCAAGTGAAGAGTACAAGCGATTGGTGAGACGGTTGCCGGAAGTATTCATCGGAAAAGACGAGAAGCTTCGAGAATTGATAAGAATTCTGTGCAATGCGGCGGAGAAGTGCATGAAGGAAAAGAAAATGCACTTGGGGCCATGGAGGAAGTACAGATACATGCAGGCCAAGTGGTTAGGGAAGTGCGAGAGGTCGACGCCGGCGCCGGTGCCGCTGCCAGTGGGATTATCCGGGCGGCCGCCGAAGGCAAGGGCCTCGATGCTTACTTATGATCTGCTGCAGAGCTTGCCGGCGGCCATGGTTAGCTCTGCTTCTGCGGTTGAAGTGGTGTGA 3159 45.43 MFFLVQILEDWTLEIRSSVFSQRLRFWAAKMGCQCSKPSIDEDGKNRASEKFPSRKGSRDNLLKKGEDMRLNSVKRDEDVRINSSQRADSIRSKVKTDGVDMKLAYLDKRVNGSNRVHDDQIEKKKRERLEAAISANYPGKGSIPKAMEAEQVAAGWPSWLSSVAGEALEGWLPRRAETFEKLDKIGQGTYSSVYKARDIIQNKLVALKRVRFDNLDVESVKFMAREILILRRLDHPNVIKLEGLITSPRSCSLYLVFEYMEHDLTGLASRPGVKFSEPQVKCYMQQLLRGLNYCHSRGVLHRDIKGSNLLIDDNGILKIADFGLASPFDPHNQVPLTSRVVTLWYRPPELLLGASYYGVAVDLWSTGCILAELYSGKPILPGKTEVEQLHKIFKLCGSPPENYWKKLQLPHSTGFKTAQPYRRCIGEMLKDFPPSAVALVDKLLSIDPAHRGTAAAALKSEFFTTKPLACEPTSLPKYPPSKEIDAKFPGCRRQSRAEGKDPKDYVEGRRPKEAHINLSLNAKDEVNMSMQKRQGYSSFKGRGGVLNPHGDETVSGFLIPPPKQNQSVTEICSDTGRISHSGPLISKPDWMKSRKQLDDHSMALDGSNLSVLSHLVATRSNISDHPYDRPGPSQSEVGRLPDFVRDSESTRKQDRVFYTHRVADSYRIENEKVCAKEQSLLAYGTDMNKLYTSGPILGPSNNLDKILKERDRQIQEYARQARHGKASNSQLKSSRATTGKHLMPSHGIDVFHEQPDFQIERRKIKLLVGNRSFDGSFQMSDISASFIDIFPEESDYPPESSYDSREEGDQNGETSSIVKENRAFWKSQKEVLQATLRRTNSIELEIRQATKNALREMDFKSIQCGCRRAAEVAVCRECVQREVCNHLRNAGYNCAVCKSKWKSSPEIPSGEHSYLEVVDDCDPNDRVIIELNFRAEFEIARASEEYKRLVRRLPEVFIGKDEKLRELIRILCNAAEKCMKEKKMHLGPWRKYRYMQAKWLGKCERSTPAPVPLPVGLSGRPPKARASMLTYDLLQSLPAAMVSSASAVEVV 1052
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36269350 36276567 + CePI673135_02g018480.1 Cec02g1848 196901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1848 1052 Gene3D Phosphorylase Kinase; domain 1 167 262 - -
Cec02g1848 1052 CDD STKc_CDK9_like 180 464 - -
Cec02g1848 1052 MobiDBLite consensus disorder prediction 799 814 - -
Cec02g1848 1052 SMART serkin_6 180 464 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1848 1052 MobiDBLite consensus disorder prediction 482 508 - -
Cec02g1848 1052 Pfam Protein kinase domain 180 464 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1848 1052 FunFam probable serine/threonine-protein kinase At1g54610 167 262 - -
Cec02g1848 1052 FunFam probable serine/threonine-protein kinase At1g54610 263 502 - -
Cec02g1848 1052 ProSiteProfiles Protein kinase domain profile. 180 464 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1848 1052 Gene3D Transferase(Phosphotransferase) domain 1 263 501 - -
Cec02g1848 1052 PANTHER CELL DIVISION PROTEIN KINASE 179 464 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cec02g1848 1052 MobiDBLite consensus disorder prediction 796 820 - -
Cec02g1848 1052 SUPERFAMILY Protein kinase-like (PK-like) 175 469 IPR011009 -
Cec02g1848 1052 Pfam PDDEXK-like family of unknown function 790 1006 IPR006502 -
Cec02g1848 1052 NCBIfam uncharacterized plant-specific domain TIGR01615 882 1007 IPR006502 -
Cec02g1848 1052 MobiDBLite consensus disorder prediction 38 63 - -
Cec02g1848 1052 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g1848 1052 MobiDBLite consensus disorder prediction 487 508 - -
Cec02g1848 1052 MobiDBLite consensus disorder prediction 40 63 - -
Cec02g1848 1052 ProSitePatterns Protein kinases ATP-binding region signature. 186 209 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1848 Cec-Chr2:36269350 Cec05g0684 Cec-Chr5:5607655 5.40E-162 dispersed
Cec07g0088 Cec-Chr7:924359 Cec02g1848 Cec-Chr2:36269350 3.00E-24 dispersed
Cec09g0840 Cec-Chr9:7867703 Cec02g1848 Cec-Chr2:36269350 2.80E-26 dispersed
Cec09g2078 Cec-Chr9:37807036 Cec02g1848 Cec-Chr2:36269350 2.40E-25 dispersed
Cec02g1847 Cec-Chr2:36261307 Cec02g1848 Cec-Chr2:36269350 1.70E-168 tandem
Cec05g1107 Cec-Chr5:9800993 Cec02g1848 Cec-Chr2:36269350 2.40E-206 transposed
Cec02g1848 Cec-Chr2:36269350 Cec03g0646 Cec-Chr3:7026716 8.70E-27 wgd
Cec02g1848 Cec-Chr2:36269350 Cec07g0322 Cec-Chr7:3168441 4.30E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71758 PF00069 Pkinase 1.60E-67 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1848 - - - 0.0