Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1864 ATGCTCCGATCCGCTCCTGGAATGGAGGATCAGCGAGATGATGTTGCACCATCAGAGCAAGGGCCTTCCAATGCTTCCTGGTGGTCTTCTGATTTTGAGGAGAAATTTGGATCTGTTTCTTTGGACCCTCGGGAAGATATTGTAAGTGAAAAGGAAGAGATCATCAATTCTGACCAAGATGTGTTATTGTCGCCTCAGAGAGCTTCTCAAATTCTCTGGGGTACTGGAATGCTTTGTGAACCAATTCCAGATGGGTTCTATTCTGTTATTCCGGATAAAAGGCTGAAAGAGCGGTTTCACAGTATTCCTTCGCTGGATGAGCTTCGTGCTTTGGAGGCCGAAGGTTACAGAAACGATGTTATTCTTGTGGAGACAGAGAAAGATAAAAAGCTTTCTATGCTGAAGCAACTGATCTTGACACTGGTTAAAGGATTGAGTTCAAATCCAGCTGCAATTATCAAGAAGATTGCTGGACTGGTTTCTGATTTTTATAAACGACCAATTTTAGAAAGTCCAGCAAAAGCTGCTCTAGAAGAAAACTCCCACTTGTTCGAGGATAGAGGCATTCAATTACTTGGACAAATAAAATTTGGTTCTTGCCGTCCAAGAGCTATCTTATTTAAGGCTTTGGCGGACACTGTAGGGCTTGAAAGCCGTCTCATGGTGGGCTTGCCTAATGAGGGGGCTATTGGGTGCGTGGACTCATACAAGCATATGTCTGTGACAGTTGTGTTGAATTCTGTGGAACTAGTTGTTGATCTGATGCGATTCCCTGGCCAGTTGTTACCTCGGTCAACTAAGGCAATTTTTATGACCCATATTTCCGCTGCTGGTGAAAGCGATTCTGCAGAAAACGATTCCTGTGATTCACCACTAGAACCTAATAGTCCTCTTTATGGTTTCTCAGAAAGAGTTGATCCTGACAGTGCTGAGAAAGATGAGAGCCTTCAATTCCACAGAAAATTTGAAGCAGCTTCAAATGCATATGGTCATTCATTGCGCAACATGATGTTGCGATCAAGTACAACACTTGACAGGAAACTGAGTTTATCACATAGTGAACCTAACATTGCAAATGCATTTTGGCGACGTAGTCGGAGAAAGGATATTGCTGAACAGCGGACTGCTAGTTCAAGTCCAGAGCATCCTTCATTTCGGGCGCGTGGCCGGTCTATGCTTAGTGGGGATAGGAAAGCCTTCAGAGATTTTTCTGATGATGTCTCTACTTCAAGATCAGATGGCTCTTCAACTTCAACTTCAGAAGCACGTCGATTAAGAAGAAGGAGCATCAGCATTACTCCAGAGATTGGTGATGATATCGTGAGGGCTGTACGAGCAATGAGTGAAACATTGAAGCAAAATCGTCTTTTGAGAGGGCAAGAAGATGACAGGTCGTTCTCCCACCCTTCAGATGTTCAGAGAAATGATCAAGTGGGCTCTCAAAGAGCAATATCATTACCATCATCGCCACATGTGTATAGGGGTCAAACCTCTGATAGAATTGGGCATTCAGCATATCCGAATCATGAATTAGCCTCAAAATGGACTAAAGTTCTTGAATCTTTCTCCTTGAATGACAAACCACTATTACCTTACCCAGAGTGGAACATCGATTACTCAGAACTGACAGTTGGAATCCGTATTGGAATTGGGTTTTTTGGAGAAGTTTTTCGTGGCATTTGGAATGGAACAGATGTGGCAATCAAAGTTTTCCTAGAGCAAGATCTAACTCCTGAAAACATTGAAGACTTCTGTAACGAGATATCAATTCTTAGTCGTCTTCGACATCCTAATGTTATACTATTTCTGGGGGCATGCACAAAGCCGCCACGCTTATCAATGATCACTGAATACATGGAGATGGGTTCCTTGTATTCCTTGATCCATTTGAGTGGTCAGAAGAAAAAACTTAGCTGGCGGAGGAGACTGAAGATGTTGCGTGACATATGCAGGGGTTTGATGTGCATACACCGAATGAAAATAGCTCATCGGGACCTAAAAAGTGCAAATTGCCTAGTGAACAAGCACTGGACCGTCAAGATATGCGATTTTGGACTTTCAAGAATATTGACAGATGCTCCAGCAAGAGGGTCTCCATCTGCAGGAACTCCAGAATGGATGGCTCCTGAGCTCTTTCGAAATGAGCCCTTCACTGAAAAGTGTGATATTTTCAGCCTGGGGGTCATTATGTGGGAGCTATGCACGCTAAGTAGACCATGGGAGGGTGTTCCACCGGAGCGGGTAGTTTATGCTGTTGGCACTGAGGGATCCCGCCTCGAGATTCCTGAAGGCCCGCTTGGCAGACTTATATCAGATTGTTGGGCGGAACCAAATGAACGGCCAAGCTGCGAAGAGATTCTCTCACGCTTGCTGGACTGCGAAGACCCATCTCAGTTTCTGAGTCCAAAACTTGAATGCATTTCAATTGCTTTACGTGTAAGAAGTGAGAAGAATCTTGGTTCGTTTACTTGCTCTGCATTCTCGTGTTTGCTTTACTTCCCAGTCAAGCAAGATCGTTGGAAGGGGTCAGTAAATCTGATCTATCACAGCTTATTTGATGCTTGTTACGACCTTTCTTGGAAATCCCTTGTAAAATTCAGAAGGATATCAGGTAGAATTGAGGTGGTTATGCTTATTTTTCTTGTTTTTGAAAATGCTTATAATGATTTATAA 2673 43.4 MLRSAPGMEDQRDDVAPSEQGPSNASWWSSDFEEKFGSVSLDPREDIVSEKEEIINSDQDVLLSPQRASQILWGTGMLCEPIPDGFYSVIPDKRLKERFHSIPSLDELRALEAEGYRNDVILVETEKDKKLSMLKQLILTLVKGLSSNPAAIIKKIAGLVSDFYKRPILESPAKAALEENSHLFEDRGIQLLGQIKFGSCRPRAILFKALADTVGLESRLMVGLPNEGAIGCVDSYKHMSVTVVLNSVELVVDLMRFPGQLLPRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDPDSAEKDESLQFHRKFEAASNAYGHSLRNMMLRSSTTLDRKLSLSHSEPNIANAFWRRSRRKDIAEQRTASSSPEHPSFRARGRSMLSGDRKAFRDFSDDVSTSRSDGSSTSTSEARRLRRRSISITPEIGDDIVRAVRAMSETLKQNRLLRGQEDDRSFSHPSDVQRNDQVGSQRAISLPSSPHVYRGQTSDRIGHSAYPNHELASKWTKVLESFSLNDKPLLPYPEWNIDYSELTVGIRIGIGFFGEVFRGIWNGTDVAIKVFLEQDLTPENIEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIAHRDLKSANCLVNKHWTVKICDFGLSRILTDAPARGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPPERVVYAVGTEGSRLEIPEGPLGRLISDCWAEPNERPSCEEILSRLLDCEDPSQFLSPKLECISIALRVRSEKNLGSFTCSAFSCLLYFPVKQDRWKGSVNLIYHSLFDACYDLSWKSLVKFRRISGRIEVVMLIFLVFENAYNDL 890
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36440390 36450459 - CePI673135_02g018640.1 Cec02g1864 196917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1864 890 MobiDBLite consensus disorder prediction 1 29 - -
Cec02g1864 890 MobiDBLite consensus disorder prediction 280 313 - -
Cec02g1864 890 MobiDBLite consensus disorder prediction 454 494 - -
Cec02g1864 890 Pfam Protein tyrosine and serine/threonine kinase 544 790 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g1864 890 Gene3D Transferase(Phosphotransferase) domain 1 621 811 - -
Cec02g1864 890 PANTHER SERINE-THREONINE PROTEIN KINASE 326 791 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec02g1864 890 ProSiteProfiles Protein kinase domain profile. 542 800 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1864 890 MobiDBLite consensus disorder prediction 1 16 - -
Cec02g1864 890 SUPERFAMILY Protein kinase-like (PK-like) 518 790 IPR011009 -
Cec02g1864 890 MobiDBLite consensus disorder prediction 369 426 - -
Cec02g1864 890 MobiDBLite consensus disorder prediction 391 408 - -
Cec02g1864 890 MobiDBLite consensus disorder prediction 455 470 - -
Cec02g1864 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g1864 890 Gene3D Phosphorylase Kinase; domain 1 535 620 - -
Cec02g1864 890 SMART serkin_6 542 791 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1864 890 FunFam Serine/threonine-protein kinase isoform 1 533 620 - -
Cec02g1864 890 Pfam Ethylene-responsive protein kinase Le-CTR1 66 261 - -
Cec02g1864 890 MobiDBLite consensus disorder prediction 471 494 - -
Cec02g1864 890 ProSitePatterns Protein kinases ATP-binding region signature. 548 569 IPR017441 GO:0005524(InterPro)
Cec02g1864 890 CDD STKc_MAP3K-like 548 790 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1864 Cec-Chr2:36440390 Cec05g1963 Cec-Chr5:31680992 6.80E-73 dispersed
Cec02g1864 Cec-Chr2:36440390 Cec01g1612 Cec-Chr1:30762998 8.50E-07 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71759 PF07714 PK_Tyr_Ser-Thr 4.90E-59 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1864 - - - 0.0