Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1918 ATGGATGCTAATGTACGAGCTCGTTTCACACTCGGCAAACAGTCTTCGCTTAAGCCAGAACGTGAAGGTTCTCCTGTGGTTACCGACGAGCTTGATGATTCGATCGCGATTGATCCTGGGATTAAGCTTATGTACTTGGCCAATGATGGTGACTTGGATGGGATTAGGGAGCTACTGGATTCGGGTACCGACGTGAATTTTCACGACACTGATGGCCGAACCTCTTTGCATGTTGCTGCTTGTCAGGGCCGGCCGGATGTCGTTGAGTTACTACTCGAAAGGGGTGCGGACGTCGACGTTCAGGACCAATGGGGCAGCACGGCTCTTGCAGATGCCATATATTACAAGAATCATGATGTGATCAAACTCTTAGAGAAACACGGTGCAAAGCTACCGATGGCTCCAATGCTCGTACAAAATGCTCGTGAAGTTCCGGAATACGAGATCAATCCAAATGAGCTTGATTTTTCTAAGAGTGTGAACATTACAAAAGGAACTTTCCGCAGTGCTTCATGGCGTGGAATTCAAGTTGCTGTGAAGACACTAGGCGAGGAAGTTTTCACCGACGAGGATAAAGTGAAGGCATTTAGGGATGAACTTGCTTTACTTCAGAAGATACGGCATCCTAATGTTGTCCAATTTCTGGGAGCTGTAACACAAAGTAGTCCGATGATGATTGTCACAGAGTATTTGCCCCAGGGGGACCTTCATGCATTCTTGAAACGTAAAGGTTCCTTGAAGCTAGCAACAGTCGTAAAGTTTGCTCTTGACATTGCAAGGGGAATGAATTATTTGCATGAGCATAAACCTGAAGCAATAATCCATCGTGATCTTGAACCTTCAAACATACTGCGGGATGATTCTGGGCACCTGAAAGTCGCAGACTTTGGAGTTAGCAAACTTCTAAAATTTTCGAATAGGGTTAAAGAAGACAGACCTGTGGCTGTGACATGTCAGGACACTTCATGGCGATATGCGGCACCTGAGGTTTATAAAAATGAAGAATATGATACAAAAGTGGATGTATTTTCATTTTCTTTGATCTTGCAAGAGATGATAGAAGGCAATCCACCTTTTCCAACAATGCCAGAAAATGAAGTAGCCAAAGCTTATATAGCTAACGAACGCCCCCCATTTACGGCTCCACCAAAGCGTTATGCACTCGGAATACAGGAGCTCATTCAGGAATGTTGGGATGAGAATCCGCATAAAAGACCCACGTTTCGGCAAATAATAAGAAGGTTGGAGGATATTAACACTCGACTCATGCAAACGAGAAGCTTAAAGCCTTATTTACAAGTGAAAGGACTAATCCAGGCAGCAGATCTTCTACCTCGGAAAGCAAATGACATCTACAGACGAGAAATATCCTTCATCTTTATAGTTGATATAATAATGATGCCACAAAAAGACCTGATAAACTTGCAAATCAGGATTATGAAAGCATTGTGTACGAGATGGCATGATTTAGCGACCATTAACAATGATGTAAAACCAAAACCAGCCCAATCGCAAACCCTAGGTGGCGCAAAAGGAAATGCTTCATTGATACCGCATATTCGGCGTCGCCATCACTTCCAACCACCTCTTATCCCTCCTCTCCCGCACTCTGTTTCGCTTCGTGTACTACTCTTTTGTGGAGGCTCAAGGGACAGTCTCTTCCTTTGCTCTCCCTTCATCGTCTCTCTGGTGAAGTTTACAGCCGAGGAGCTTCGTAGGATTATGGACTTTAAGCATAACATTCGTAATATGTCTGTTATTGCTCACGTCGATCATGGAAAGTCGACACTTACAGACTCTCTTGTGGCTGCTGCGGGTATCATTGCACAAGAAGTTGCCGGTGATGTACGAATGACAGACACTCGCCAAGATGAGGCAGAGCGTGGTATCACCATTAAATCTACTGGAATCTCCCTCTACTATGAGATGTCCGATGAATCCTTGAAAAGTTACAAGGGAGAGAGACAGGGAAATGAATATCTTATCAATCTTATTGATTCACCTGGGCACGTTGACTTCTCATCTGAGGTTACAGCTGCTTTGCGTATTACCGATGGTGCCCTTGTTGTGGTGGATTGTGTCGAAGGTGTTTGTGTCCAAACAGAGACCGTGCTCCGTCAGGCTTTGGGAGAGAGGATTAGACCTGTCTTGACTGTTAACAAGATGGACAGGTGCTTCCTTGAACTCCAAGTGGATGGAGAAGAGGCTTACCAAACATTTCAGAGGGTGATAGAGAATGCCAATGTGATTATGGCCACATACGAGGATCCACTTCTTGGGGATGTTCAAGTGTACCCCGAGAAAGGAACAGTCGCCTTCTCTGCTGGTCTGCACGGTTGGGCGTTTACCCTGACTAACTTTGCGAAGATGTATGCCTCCAAGTTTGGAGTAGACGAGTCAAAGATGATGGAGAGACTTTGGGGTGAGAACTTCTTTGATCCTGCAACCAAGAAGTGGACCAGCAAGAACACTGGCTCTCCAACATGCAAGCGTGGGTTTGTCCAGTTCTGCTATGAACCCATCAAGCAGATCATTGCAACTTGCATGAACGATCAGAAGGACAAGCTATGGCCCATGTTGCAGAAGCTTGGAGTTGTGATGAAGTCTGAAGAGAAGGATCTGATGAGTAAAGCATTGATGAAGAGGGTCATGCAAACATGGCTCCCAGCAAGCAATGCTCTTTTGGAAATGATGATCTTTCATCTTCCATCCCCTGCCACGGCTCAAAAGTACCGTGTTGAGAATTTGTACGAGGGTCCACTAGATGATGCTTATGCGAGTGCCATTAGAAGTTGTGATCCTGAAGGACCTCTTATGCTTTATGTATCGAAGATGATTCCTGCATCAGACAAGGGCAGGTTCTTTGCCTTTGGACGTGTCTTCTCTGGGAAAGTTTCAACTGGTTTGAAAGTTAGAATTATGGGACCAAACTATGTTCCTGGCGAGAAGAAAGATTTGTATGTGAAGAGTGTCCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACAGTGGAGGATGTGCCGTGTGGTAACACTGTTGCCATGGTTGGATTGGATCAATTCATCACAAAGAATGCTACTCTGACAAACGAGAAGGAAGTTGATGCCCATCCAATTCGAGCCATGAAATTTTCTGTATCTCCTGTGGTGCGTGTGGCTGTTCAGTGCAAGGTGGCATCTGATCTTCCCAAGCTCGTGGAAGGGCTTAAACGTCTGGCGAAGTCAGATCCTATGGTTGTATGTACAATGGAGGAATCTGGTGAGCACATTGTTGCCGGTGCTGGAGAACTGCATCTTGAGATCTGTCTGAAGGATTTGCAAGATGACTTCATGGGTGGAGCTGAGATCATAAAATCTGACCCTGTTGTCTCTTTCCGTGAAACTGTCCTTGAGAGGTCATGCCGCACGGTGATGAGTAAATCCCCCAACAAACACAATCGTCTATACATGGAAGCACGACCGATGGAGGAAGGACTGGCAGAAGCTATTGACGATGGCCGCATCGGACCACGGGATGACCCTAAAGTTAGGTCTAAAATCTTGTCAGAGGAGTTTGGTTGGGACAAAGATCTTGCTAAGAAGATTTGGTGCTTTGGTCCTGAGACTACTGGCCCTAACATGGTGGTTGATATGTGTAAGGGAGTTCAATACCTGAATGAAATCAAGGATTCCGTTGTCGCCGGTTTCCAGTGGGCGTCGAAAGAAGGTGCATTGGCTGAAGAAAACATGAGAGGAATCTGTTTTGAAGTTTGTGATGTGGTGCTTCACGCTGATGCCATCCACAGAGGAGGTGGTCAAGTCATTCCGACCGCTAGGAGGGTAATTTACGCTTCTCAGCTGACCGCCAAACCAAGACTTCTTGAGCCCGTGTACCTAGTGGAGATTCAGGCTCCTGAGCAAGCTCTTGGTGGTATCTACAGTGTTCTAAACCAGAAGCGTGGGCACGTCTTTGAGGAAATGCAGAGGCCCGGTACCCCTCTTTACAACATCAAGGCGTATCTCCCTGTCATTGAGTCCTTCGGGTTCTCGAGCACATTGAGAGCTGCAACTTCCGGGCAGGCGTTCCCACAGTGTGTTTTCGACCATTGGGACATGATGTCGTCGGATCCATTGGAACCTGGTTCCCAGGCTGCACAGTTAGTTGCAGATATCCGCAAGAGGAAGGGATTGAAGGAACAAATGACCCCACTTTCCGAGTTCGAGGACAAGCTGTAG 4218 46.23 MDANVRARFTLGKQSSLKPEREGSPVVTDELDDSIAIDPGIKLMYLANDGDLDGIRELLDSGTDVNFHDTDGRTSLHVAACQGRPDVVELLLERGADVDVQDQWGSTALADAIYYKNHDVIKLLEKHGAKLPMAPMLVQNAREVPEYEINPNELDFSKSVNITKGTFRSASWRGIQVAVKTLGEEVFTDEDKVKAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPQGDLHAFLKRKGSLKLATVVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKFSNRVKEDRPVAVTCQDTSWRYAAPEVYKNEEYDTKVDVFSFSLILQEMIEGNPPFPTMPENEVAKAYIANERPPFTAPPKRYALGIQELIQECWDENPHKRPTFRQIIRRLEDINTRLMQTRSLKPYLQVKGLIQAADLLPRKANDIYRREISFIFIVDIIMMPQKDLINLQIRIMKALCTRWHDLATINNDVKPKPAQSQTLGGAKGNASLIPHIRRRHHFQPPLIPPLPHSVSLRVLLFCGGSRDSLFLCSPFIVSLVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKSYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTSKNTGSPTCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLQKLGVVMKSEEKDLMSKALMKRVMQTWLPASNALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYASAIRSCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQAAQLVADIRKRKGLKEQMTPLSEFEDKL 1405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37007107 37021526 + CePI673135_02g019180.1 Cec02g1918 196971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1918 1405 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515(InterPro)
Cec02g1918 1405 SMART ANK_2a 71 100 IPR002110 GO:0005515(InterPro)
Cec02g1918 1405 SMART ANK_2a 39 67 IPR002110 GO:0005515(InterPro)
Cec02g1918 1405 SMART ANK_2a 104 133 IPR002110 GO:0005515(InterPro)
Cec02g1918 1405 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 620 635 IPR031157 -
Cec02g1918 1405 PRINTS GTP-binding elongation factor signature 627 635 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1918 1405 PRINTS GTP-binding elongation factor signature 663 673 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1918 1405 PRINTS GTP-binding elongation factor signature 715 724 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1918 1405 PRINTS GTP-binding elongation factor signature 583 596 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1918 1405 PRINTS GTP-binding elongation factor signature 679 690 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1918 1405 SUPERFAMILY EF-G C-terminal domain-like 1046 1122 IPR035647 -
Cec02g1918 1405 FunFam Translation elongation factor 2 1285 1405 - -
Cec02g1918 1405 CDD STKc_MAP3K-like 162 415 - -
Cec02g1918 1405 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 579 906 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1918 1405 CDD aeEF2_snRNP_like_IV 1121 1293 - -
Cec02g1918 1405 Gene3D Elongation Factor G (Translational Gtpase), domain 3 1048 1125 - -
Cec02g1918 1405 Gene3D - 1132 1284 IPR014721 -
Cec02g1918 1405 NCBIfam small GTP-binding protein domain 582 737 IPR005225 GO:0005525(InterPro)
Cec02g1918 1405 Pfam Elongation factor Tu GTP binding domain 580 783 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1918 1405 Gene3D - 565 799 IPR027417 -
Cec02g1918 1405 Gene3D Transferase(Phosphotransferase) domain 1 232 441 - -
Cec02g1918 1405 Gene3D - 34 142 IPR036770 -
Cec02g1918 1405 CDD EF2_II 937 1032 - -
Cec02g1918 1405 SMART EFG_IV_2 1168 1284 IPR005517 GO:0005525(InterPro)
Cec02g1918 1405 FunFam Integrin-linked protein kinase family 24 147 - -
Cec02g1918 1405 CDD EF2 582 792 - -
Cec02g1918 1405 Pfam Ankyrin repeats (3 copies) 43 130 IPR002110 GO:0005515(InterPro)
Cec02g1918 1405 FunFam Translation elongation factor 2 565 799 - -
Cec02g1918 1405 Pfam Elongation factor G C-terminus 1286 1372 IPR000640 -
Cec02g1918 1405 Pfam Protein tyrosine and serine/threonine kinase 161 415 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g1918 1405 FunFam Translation elongation factor 2 1131 1284 - -
Cec02g1918 1405 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 565 1404 - GO:0003746(PANTHER)|GO:0003924(PANTHER)|GO:0005829(PANTHER)|GO:0006414(PANTHER)|GO:0043022(PANTHER)|GO:1990904(PANTHER)
Cec02g1918 1405 CDD eEF2_snRNP_like_C 1289 1367 - -
Cec02g1918 1405 Pfam Elongation factor Tu domain 2 956 1024 IPR004161 GO:0005525(InterPro)
Cec02g1918 1405 SUPERFAMILY Ribosomal protein S5 domain 2-like 1124 1288 IPR020568 -
Cec02g1918 1405 FunFam serine/threonine-protein kinase STY46-like 149 232 - -
Cec02g1918 1405 ProSiteProfiles Protein kinase domain profile. 98 432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1918 1405 Pfam Elongation factor G, domain IV 1172 1284 IPR005517 GO:0005525(InterPro)
Cec02g1918 1405 Gene3D Translation factors 905 1046 - -
Cec02g1918 1405 Gene3D Phosphorylase Kinase; domain 1 148 231 - -
Cec02g1918 1405 CDD EF2_snRNP_III 1049 1121 - -
Cec02g1918 1405 ProSiteProfiles Ankyrin repeat region circular profile. 71 102 - -
Cec02g1918 1405 SUPERFAMILY Protein kinase-like (PK-like) 163 425 IPR011009 -
Cec02g1918 1405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 566 903 IPR027417 -
Cec02g1918 1405 SMART EFG_C_a 1286 1375 IPR000640 -
Cec02g1918 1405 SUPERFAMILY EF-G C-terminal domain-like 1289 1400 IPR035647 -
Cec02g1918 1405 FunFam Os01g0748600 protein 142 434 - -
Cec02g1918 1405 SUPERFAMILY Translation proteins 904 1038 IPR009000 -
Cec02g1918 1405 Pfam Elongation Factor G, domain III 1049 1111 IPR041095 -
Cec02g1918 1405 SUPERFAMILY Ankyrin repeat 38 131 IPR036770 -
Cec02g1918 1405 FunFam Translation elongation factor 2 905 1046 - -
Cec02g1918 1405 FunFam Translation elongation factor 2 1048 1125 - -
Cec02g1918 1405 Gene3D - 1285 1405 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1918 Cec-Chr2:37007107 Cec05g2630 Cec-Chr5:37064021 3.20E-69 dispersed
Cec02g1917 Cec-Chr2:36988332 Cec02g1918 Cec-Chr2:37007107 1.40E-154 tandem
Cec01g0377 Cec-Chr1:3906419 Cec02g1918 Cec-Chr2:37007107 4.60E-41 transposed
Cec02g0234 Cec-Chr2:2236769 Cec02g1918 Cec-Chr2:37007107 8.30E-20 transposed
Cec02g1797 Cec-Chr2:35838041 Cec02g1918 Cec-Chr2:37007107 1.40E-167 transposed
Cec02g1933 Cec-Chr2:37194833 Cec02g1918 Cec-Chr2:37007107 0.00E+00 transposed
Cec04g0422 Cec-Chr4:16210512 Cec02g1918 Cec-Chr2:37007107 3.70E-20 transposed
Cec06g0259 Cec-Chr6:2847311 Cec02g1918 Cec-Chr2:37007107 1.70E-32 transposed
Cec09g1055 Cec-Chr9:10255804 Cec02g1918 Cec-Chr2:37007107 2.60E-116 transposed
Cec09g1458 Cec-Chr9:22219160 Cec02g1918 Cec-Chr2:37007107 2.80E-86 transposed
Cec09g1948 Cec-Chr9:36496406 Cec02g1918 Cec-Chr2:37007107 5.50E-21 transposed
Cec10g1685 Cec-Chr10:31363265 Cec02g1918 Cec-Chr2:37007107 4.20E-22 transposed
Cec02g1918 Cec-Chr2:37007107 Cec03g0681 Cec-Chr3:7320698 1.60E-140 wgd
Cec02g1918 Cec-Chr2:37007107 Cec03g0596 Cec-Chr3:6357934 1.90E-37 wgd
Cec02g1918 Cec-Chr2:37007107 Cec04g2113 Cec-Chr4:39034756 1.60E-129 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71761 PF00009 GTP_EFTU 6.40E-66 CL0023 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1918 K03234 - csv:101208886 1651.34