Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1924 ATGGATGATCTTGGAGCTTCCATTTCATCGGTCGATTCCGAGAGGTGTAGATTTCTAGGTGTCATTGGAATTCTTTGTGTAAAAATAGAAGTGGGGGGTCGATTTGCTTTAGGTTTATTGGGTTTTGGTTTGATGGAGGATTGGGGAAGGTTCATGGAAAAGTGGGCTTCTGCACTTGTGATCCGAATGCAGCAAGATCAAGCCAAAAAGAATTCAACCGAAGTGGAGTTCTTTTCTGATTATGGCGATGCGAGTAGATACAAAATTCAGGAAGTAATCGGGAAAGGAAGCTATGGGGTTGTCTGTTCTGCAATTGACACCCGCACCGGCGACAAGGTTGCAATAAAGAAGATACATAATATTTTTGAGCATATATCTGACGCGGTTAGAATTCTTCGTGAGATAAAGCTGCTTAGACTTCTTCGCCATCCTGATATTGTTGAAATTAAACACATTATGCTACCACCTTCAAGGAGGGATTTCAAAGACATCTACGTTGTTTTCGAGCTCATGGAATCAGATCTCCACCAAGTTATTAAAGCAAATGATGATCTGACTCGAGAACATTATCAGTTTTTCCTTTACCAACTTCTTCGTGCATTAAAATATATCCATACAGCGAATGTCTACCATCGTGATTTAAAACCAAAGAATATATTAGCAAATGCAAATTGTAAACTTAAAATTTGTGATTTTGGATTAGCAAGAGTTGCCTTCAGTGACACACCAACAACAATTTTCTGGACGGATTATGTTGCTACTAGATGGTACCGAGCTCCAGAGCTGTGTGGTTCATTTTTCTCGAAGTATACACCTGCAATTGATATATGGAGTATTGGCTGCATATTTGCTGAAGTATTAATGGGGAAGCCACTTTTTCCTGGTAAAAACGTTGTCCACCAGCTCGATTTGATGACAGATCTCCTTGGAACTCCTTCATTAGATACAATCTCCAGGGTACGTAATGACAAGGCTAGAAGATATTTAACTACTATGAGGAAAAAGCAGCCGGTACCATTTTCTCAAAAGTTCCCAAATGCAGATCCATTAGCGCTGAGGCTACTAGAAAGACTGCTTGCTTTTGATCCAAAAGATAGACCAACTGCTGAAGAGGCACTGGCTGATCCATACTTCAAGGGATTGGCAAAAATTGAGAGGGAACCTTCCTGCCAGCCAATCACAAAGATGGAATTTGAATTTGAGAGACGGAGGGTCACAAAAGAAGACATTCAAGAGCTAATCTTCCGGGAGATACTAGAATATCATCCTCAGCTACTAAAAGACTACATGAATGGGACGGAGAGAACGAATTTTCTATATCCAAGTGCTGTTGACCAATTTAGAAAGCAGTTTGCGCATCTGGAGGAAAATGGTGGTAAAAGTGCGCCAGTTATTCCTCTTGACAGAAAGCATGTGTCCCTTCCAAGGTCAACAGTTGTACACTCGAACCCAGTCTATTCTAAGGACCAAGTAAATAATGTAACTCTCCAAGATGGGAAGATCTCCGAAGAGGCATACGGCAAGACTTCCCGAGATAGTGAAGGACGGCTAACAAATATATCAAGGGCCATGCAGGCACCACAAAAAATCCCATTTGCAGCTAAGCCTGGAAGAGTGGTTGGACCGGTTATAGCAGATGAGAATGGGAGGCTGGTGAAGGAACCATACGATCCAAGAACGTTGATCAGAGGTGCCATTCTTCCTCCTGCATATCACTACCACCAAAAACCCGTTGCTGGAAATCAAGAAAGATCTGCAGCAGAAACTAAACTTGATATTTCTTTAAGGGCCGCTAAGCAAGCATCCCAGTGTGGCATGGCTTCCAAATTAGGATCAGATATTGCCATCAGCATCGACTCGAATCCCTTTTACATGACACGTGCCGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCGATGCAAACTTTCTTCAGGCCAAGGCCGCCCAATACGGTGGTCTTAGTGCAGCAACAGCCACCGCCACATCGGTTGCTCACAGAAAGGTGGTTGCGGGAATATTAATGGAGAACGAGATTAATATTGTAAATGACGGGGCATCGGGGGACGATCAGACCGCAGAGGATTTTTATGATGTTGACCAGCGGGAGAACGATGCAAAGGTCGCGGAGCTGAACCATAGAATTGAGGTTTTGGAGCGTGAAAAGAAAAAATTGGTTGATGAAAATGAAGAAATCAAAGATAAGATTAAAAGGTTGTCAGCGGAGATTGAAGGGTTGAAGAGTGAAGAGGGGAGGCTGATAGAACAACTGAAAGAAATGGAGAAACAAGTTGAACGTTCTGAAGAGGGAAATAAGGTGGTAGAGTCGGTTGCGGCGAGGGCACTGGAGCTTGAGACTGAAGTCTCGAGGCTACAGCATGATTTGATATCTGCAATGAATGGAGCTGATGAGGCAAATGCCGAAGTTGCGGAGTTGAGGAAAAATTTGGAGGAAAAGGGAGTGAAGGTTGCAGCTCTGGAGGAAGAGTTGGAAGCCCTGAAGAAAGCAAAGGCAGAGAGTGAAAAGAAAGTCAGAGAATTGGAGAGGAAAGTTGGGGTTTTGGAGGTCAAGGAGATAGAGGAGAAGAGTAAAAAAGTTAGGGTAGAGGAGGAAATGAGAGACAAAATTGAGGAGAAAGAGAGGGAAATCACCAGTTTCAAAAAGACTATTGAGAATTTGGAATTGGTGGTAACAAAGAACGGCCTGGAATTAGATAAGTGGATCAAGGAGAAACTTAAGGTGGAAGAGTTGTTGAAGGAGTCAGAGGAGAAAACAAAAATGTTTGACTCGAAAATGGTTCAGTTGCAGAAGGAAGTAGAGGAAGCACACAAAGTCATTAGTGGATTAAAGGAGAAAGCGGTGAATGCGTTGAATGGAACTGCAGAGGAACTCAAGTCGGCTTTCGAAGGTGCAGAGAAGGAGTTGAATTTGAACTGGCCTATAATTGCAGGTTCAACAGGAGTTGTTGCTGCCGTCGCTGCACTGGCCTTTGTTTTATCAGCACTCATAAGTTCATGGGTGAAACTCGCAGCTAACTCTTCCTCAAAACAATGGCAGCTAGAGGTGCAGTTGTACGCCGGCATTTGCTAG 3096 43.25 MDDLGASISSVDSERCRFLGVIGILCVKIEVGGRFALGLLGFGLMEDWGRFMEKWASALVIRMQQDQAKKNSTEVEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTRTGDKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPVIPLDRKHVSLPRSTVVHSNPVYSKDQVNNVTLQDGKISEEAYGKTSRDSEGRLTNISRAMQAPQKIPFAAKPGRVVGPVIADENGRLVKEPYDPRTLIRGAILPPAYHYHQKPVAGNQERSAAETKLDISLRAAKQASQCGMASKLGSDIAISIDSNPFYMTRAGVNKVELKDQISIDANFLQAKAAQYGGLSAATATATSVAHRKVVAGILMENEINIVNDGASGDDQTAEDFYDVDQRENDAKVAELNHRIEVLEREKKKLVDENEEIKDKIKRLSAEIEGLKSEEGRLIEQLKEMEKQVERSEEGNKVVESVAARALELETEVSRLQHDLISAMNGADEANAEVAELRKNLEEKGVKVAALEEELEALKKAKAESEKKVRELERKVGVLEVKEIEEKSKKVRVEEEMRDKIEEKEREITSFKKTIENLELVVTKNGLELDKWIKEKLKVEELLKESEEKTKMFDSKMVQLQKEVEEAHKVISGLKEKAVNALNGTAEELKSAFEGAEKELNLNWPIIAGSTGVVAAVAALAFVLSALISSWVKLAANSSSKQWQLEVQLYAGIC 1031
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37076918 37085806 - CePI673135_02g019240.1 Cec02g1924 196977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1924 1031 FunFam Mitogen-activated protein kinase 173 401 - -
Cec02g1924 1031 Gene3D - 699 873 - -
Cec02g1924 1031 Coils Coil 703 859 - -
Cec02g1924 1031 Coils Coil 861 898 - -
Cec02g1924 1031 FunFam Mitogen-activated protein kinase 77 180 - -
Cec02g1924 1031 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 84 419 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cec02g1924 1031 ProSitePatterns MAP kinase signature. 122 225 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1924 1031 Coils Coil 956 976 - -
Cec02g1924 1031 ProSitePatterns Protein kinases ATP-binding region signature. 93 117 IPR017441 GO:0005524(InterPro)
Cec02g1924 1031 Pfam Protein kinase domain 87 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1924 1031 Gene3D Transferase(Phosphotransferase) domain 1 173 401 - -
Cec02g1924 1031 CDD STKc_TDY_MAPK 86 423 - -
Cec02g1924 1031 ProSiteProfiles Protein kinase domain profile. 87 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1924 1031 SUPERFAMILY Protein kinase-like (PK-like) 83 382 IPR011009 -
Cec02g1924 1031 SMART serkin_6 87 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1924 1031 PRINTS Tropomyosin signature 709 726 IPR000533 -
Cec02g1924 1031 PRINTS Tropomyosin signature 829 857 IPR000533 -
Cec02g1924 1031 PRINTS Tropomyosin signature 860 883 IPR000533 -
Cec02g1924 1031 PRINTS Tropomyosin signature 919 944 IPR000533 -
Cec02g1924 1031 Coils Coil 906 954 - -
Cec02g1924 1031 Gene3D Phosphorylase Kinase; domain 1 102 424 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1924 Cec-Chr2:37076918 Cec07g1131 Cec-Chr7:26556051 2.10E-206 dispersed
Cec06g0576 Cec-Chr6:6367183 Cec02g1924 Cec-Chr2:37076918 1.70E-213 transposed
Cec02g1924 Cec-Chr2:37076918 Cec09g2339 Cec-Chr9:40244236 7.50E-249 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71762 PF00069 Pkinase 4.40E-66 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1924 - - - 0.0