Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1927 ATGAATGTCCCCATTTTGCTTTGCAGCAAAAAGCCGGTTCGACCCGGCTTAAAGGCTTTGAATTTGGAGTTTTGGGGACTTGGGATTCAATTGGATTGGGAATTCAATTTTTGGACAACATTTTGGCATATCCCCCCAATGCTTTTTGGGTCTCCATTGGTTAAACACGATTCGCTTTATTTCCCTTTCTGGGTTCCTGGAGGAAGGGGCAAATCTGGGTCTATCTTCGATTACTACATGAGCTTTGTTCTCTTTTGTATGACAAAGTGGACAAGAGTTGATGACCTAAAATTATGTTCAATGAAAAGAACTCAAGAATTGATGATGCTTGTAAAGATCTCAGTGAGACATGGGGTCCTTAGTCCTTATCTCATACCTGAATTTCCAGATGGGCATGCGTTGAAATTTGTTAAGAGCTTGAACTTGAAGTTTTCTTTGGCTTGGAGCTTTAGTAAACAGTTGATCAGATATGGCATCTGGGAGATAGATCAGGTTGGGATTCAAATTCCCAATGACCACCCTGAAAATAGACTTCTTTCGGTTGATGTCAAAAGAAATGAAGAAAATTCAGAAGTTATGGCTGTGACAAAATCAAGTGAACATGATAACCATAGCCAATGCAGTTCCACTTACCAACATGAAAAAGCCGGCAATCCACAATCAGGGGAAGAAGGAAGCTCTGGAAATGCTAGGAAGCAGGCTTCGAGGTCGTATGGAGGATATGGAGGAATTGTGCCACCGTCTCCTCTTGTTGGCTTGCCAGAAATCTCACATCTTGGGTGGGGCCACTGGTTCACTCTCAGGGATCTAGAGCTTGCAACTAATCGCTTTTCTACCGAAAATATTCTTGGGGAAGGGGGATATGGGGTTGTGTATAAAGGCAGACTCATCAATGGCACTGAGGTTGCAGTGAAAAAACTACTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCTATTGGTCACGTTCGGCATAAGAATCTTGTCCGACTGCTGGGTTATTGCATAGAGGGAGTTCATAGGATGCTAGTATATGAATATGTGAACAATGGCAATCTAGAACAGTGGCTACATGGAGCCATGTGCCAGCATGGCACGCTTACTTGGGAGGCTCGCATGAAGGTGCTTCTTGGCACTGCTAAGGCGCTTGCGTATTTACACGAAGCAATTGAGCCAAAAGTTGTTCACAGAGATATAAAATCAAGCAACATTTTGATTGATGACGAGTTCAATGCCAAAGTTTCTGATTTCGGATTGGCCAAACTCTTGGGCTCTGGAGAGAGTCACATCACGACTAGAGTTATGGGAACATTTGGGTATGTGGCACCAGAATATGCAAATACGGGCTTGTTGAATGAAAAGAGTGACATTTATAGCTTCGGTGTTCTCCTGCTAGAAGCAATTACAGGGAGGGACCCTGTGGATTACGCACGTCCTTCTAATGAGGTTAATCTGGTTGAGTGGCTAAAGATGATGGTAGCAACAAGGAGAGCAGAGGAAGTTGTGGACATGAACCTTGAGATCAAGCCAACTACTCGTGCTTTGAAACGTGCCCTTCTTGTTGCACTTAGGTGTATTGATCCTGAATCAATCAAGAGACCCAAGATGAGTCAAGTTGTAAGAATGCTTGAAGCTGACGAATTTCCACTCCACGAGGATAGAAGGAACCGAAAAAGCCGATCGATAAGCTTGGAGATCGAGTCAATGAAAGAAATATCAGGTCCAGAGCAGACGGGTGGGCCGTCCGAGAGCCATAAATCAGAGACAAGCCATGAATAG 1794 43.81 MNVPILLCSKKPVRPGLKALNLEFWGLGIQLDWEFNFWTTFWHIPPMLFGSPLVKHDSLYFPFWVPGGRGKSGSIFDYYMSFVLFCMTKWTRVDDLKLCSMKRTQELMMLVKISVRHGVLSPYLIPEFPDGHALKFVKSLNLKFSLAWSFSKQLIRYGIWEIDQVGIQIPNDHPENRLLSVDVKRNEENSEVMAVTKSSEHDNHSQCSSTYQHEKAGNPQSGEEGSSGNARKQASRSYGGYGGIVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSTENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKRPKMSQVVRMLEADEFPLHEDRRNRKSRSISLEIESMKEISGPEQTGGPSESHKSETSHE 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37128872 37133538 - CePI673135_02g019270.1 Cec02g1927 196980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1927 597 Gene3D Phosphorylase Kinase; domain 1 259 352 - -
Cec02g1927 597 Pfam Protein kinase domain 278 546 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1927 597 Coils Coil 297 317 - -
Cec02g1927 597 PANTHER OS01G0323000 PROTEIN 175 571 IPR052232 -
Cec02g1927 597 ProSiteProfiles Protein kinase domain profile. 277 541 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1927 597 ProSitePatterns Protein kinases ATP-binding region signature. 283 306 IPR017441 GO:0005524(InterPro)
Cec02g1927 597 SUPERFAMILY Protein kinase-like (PK-like) 261 553 IPR011009 -
Cec02g1927 597 FunFam Putative receptor-like protein kinase 259 352 - -
Cec02g1927 597 MobiDBLite consensus disorder prediction 199 234 - -
Cec02g1927 597 SMART serkin_6 277 531 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1927 597 MobiDBLite consensus disorder prediction 556 597 - -
Cec02g1927 597 CDD STKc_IRAK 283 549 - -
Cec02g1927 597 Gene3D Transferase(Phosphotransferase) domain 1 353 566 - -
Cec02g1927 597 MobiDBLite consensus disorder prediction 190 235 - -
Cec02g1927 597 MobiDBLite consensus disorder prediction 556 570 - -
Cec02g1927 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g1927 597 FunFam Putative receptor-like serine/threonine-protein kinase 353 563 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1927 Cec-Chr2:37128872 Cec06g0424 Cec-Chr6:4794683 5.30E-146 dispersed
Cec03g0647 Cec-Chr3:7038963 Cec02g1927 Cec-Chr2:37128872 1.80E-33 transposed
Cec02g1927 Cec-Chr2:37128872 Cec03g0575 Cec-Chr3:6093233 2.00E-61 wgd
Cec02g1927 Cec-Chr2:37128872 Cec09g2350 Cec-Chr9:40323737 1.10E-191 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71763 PF00069 Pkinase 2.50E-48 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1927 - - - 0.0