Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1928 ATGGCAGCTTCATCAATGGCTCTCTCCTCCCCATCTCTCGCCGGCCAAGCCGTCAAATTATCCCCCACGACCTCCGACCTCCTCGGCGACGGTCGCATCACCATGAGAAAAACTGCCGGAAAGCCCAAGCCCATTTCCTCCGGAAGCCCATGGTACGGCCCAGATCGCGTCAAATACCTAGGCCCATTCTCTGGCGAGCCCCCTTCTTATTTGACTGGAGAATTCCCCGGCGATTACGGCTGGGACACCGCCGGTTTATCCGCCGACCCGGAAACTTTCGCGAAAAACCGTGAGCTGGAAGTGATCCACTCGAGATGGGCCATGCTCGGAGCTCTGGGCTGCGTCTTCCCGGAGCTGCTGTCTCGCAACGGAGTAAAATTCGGCGAAGCCGTGTGGTTCAAAGCTGGGTCTCAAATCTTTAGCGAGGGTGGGCTAGATTATTTGGGGAACCCGAGCCTGGTCCACGCTCAGAGCATTTTAGCCATTTGGGCTTGTCAAGTTGTGCTAATGGGTGCGGTTGAAGGGTATAGAATTGCGGGGGGGCCATTGGGGGAAATCACTGACCCGATTTACCCAGGTGGGAGCTTTGATCCATTGGGGCTTGCTGATGATCCAGAGGCGTTTGCGGAATTGAAAGTGAAGGAACTTAAGAATGGAAGATTGGCTATGTTTTCGATGTTTGGTTTCTTTGTACAGGCGATTGTGACTGGGAAAGGACCTTTGGAGAATTTGGCTGATCATTTGGCCGATCCTGTTAACAATAATGCTTGGGCTTATGCTACTAACTTTGTACCTGGAAAGTGA 804 53.11 MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTAGKPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37141034 37141837 - CePI673135_02g019280.1 Cec02g1928 196981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1928 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 267 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cec02g1928 267 MobiDBLite consensus disorder prediction 28 50 - -
Cec02g1928 267 SUPERFAMILY Chlorophyll a-b binding protein 50 264 - -
Cec02g1928 267 FunFam Chlorophyll a-b binding protein, chloroplastic 58 260 - -
Cec02g1928 267 Pfam Chlorophyll A-B binding protein 67 234 IPR022796 -
Cec02g1928 267 Gene3D Chlorophyll a/b binding protein domain 58 260 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0290 Cec-Chr2:2677248 Cec02g1928 Cec-Chr2:37141034 2.90E-120 dispersed
Cec02g1928 Cec-Chr2:37141034 Cec04g2143 Cec-Chr4:39272733 1.70E-144 dispersed
Cec08g0043 Cec-Chr8:798001 Cec02g1928 Cec-Chr2:37141034 6.20E-56 transposed
Cec11g1955 Cec-Chr11:33598804 Cec02g1928 Cec-Chr2:37141034 6.40E-44 transposed
Cec02g1928 Cec-Chr2:37141034 Cec04g2142 Cec-Chr4:39269986 9.90E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1928 K08912 - csv:101213845 540.806