Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1933 ATGGACTTCAAGCATAACATTCGTAATATGTCTGTTATTGCTCATGTCGATCATGGGAAGTCCACTCTCACGGATTCTCTTGTGGCTGCTGCTGGTATCATTGCTCAAGAAGTTGCGGGTGATGTTCGGATGACAGATACCCGTCAAGATGAGGCAGAACGGGGTATTACCATCAAATCGACTGGCATCTCCCTCTATTATGAGATGTCTGATGAATCATTGAAAAATTATAAGGGAGAGAGGCAGGGAAATGAGTACCTTATCAATCTTATTGATTCGCCTGGGCATGTTGACTTCTCATCTGAGGTTACAGCTGCTCTACGAATTACTGATGGTGCGCTTGTGGTGGTGGATTGTGTTGAAGGAGTTTGTGTCCAAACAGAGACAGTGCTTCGTCAGGCGTTGGGAGAGAGGATTCGTCCTGTGTTGACAGTTAACAAGATGGACAGATGCTTCCTTGAGCTTCAAGTAGATGGGGAAGAGGCTTATCAGACCTTCTCGAGAGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAGGATCCACTTCTTGGTGATGTCCAAGTGTATCCTGAGAAGGGAACAGTTGCTTTCTCTGCTGGTTTGCACGGTTGGGCTTTCACCCTGACTAACTTTGCAAAGATGTATGCCTCTAAATTTGGAGTAGACGAGGCTAAGATGATGGAGAGGCTTTGGGGTGAGAACTTCTTTGACCCTGCCACCAAGAAATGGACCACCAAGAACACTGGATCTGCAACGTGCAAGCGTGGATATGTTCAGTTCTGCTATGAACCTATCAAGCAGATCATTGCAACTTGTATGAATGACCAGAAGGACAAGCTATGGCCTATGTTGCAGAAACTTGGAGTTGTCATGAAGTCTGAAGAGAAGGATCTGATGGGAAAAGCATTGATGAAGCGAGTCATGCAAACGTGGCTCCCAGCAAGCAATGCTCTTTTGGAAATGATGATCTTTCATCTCCCTTCCCCTGCCACGGCCCAAAAGTATCGTGTGGAGAATTTGTATGAGGGTCCACTAGATGATGTGTTTGCAAGTGCCATCAGAAGTTGTGACCCTGAGGGACCTCTTATGCTTTATGTATCAAAGATGATTCCTGCATCGGACAAGGGCAGGTTCTTTGCCTTCGGTCGTGTCTTCTCTGGGAGGGTTTCAACTGGTTTGAAAGTTAGAATCATGGGTCCCAACTATGTTCCTGGTGAGAAGAAAGACTTGTATGTTAAGAGCGTCCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACTGTGGAGGATGTGCCTTGTGGTAACACTGTTGCCATGGTTGGATTGGATCAATTCATCACAAAGAATGCTACTCTGACAAACGAGAAGGAAGTTGATGCTCATCCAATTCGAGCCATGAAATTTTCTGTATCTCCCGTTGTGCGTGTGGCTGTTCAGTGCAAGGTGGCATCTGATCTTCCCAAGCTCGTGGAAGGGCTTAAACGTCTGGCGAAGTCAGATCCTATGGTTGTGTGTACCATGGAGGAATCTGGTGAGCACATTGTTGCTGGTGCCGGAGAACTACATCTTGAGATCTGTCTGAAGGATTTGCAAGAGGATTTCATGGGTGGAGCTGAGATCATAAAATCTGACCCTGTTGTCTCTTTCCGTGAAACCGTCCTTGAGAGGTCATGCCGCACAGTGATGAGTAAATCCCCCAACAAACACAATCGTCTATACATGGAAGCACGACCCATGGAGGAAGGACTGGCAGAGGCTATCGATGATGGCCGCATTGGACCACGAGACGATCCTAAAGTTCGTTCTAAAATTTTGTCGGAGGAATTCGGTTGGGACAAAGATCTTGCCAAGAAGATTTGGTGCTTTGGTCCTGAGACTACTGGCCCCAACATGGTGGTTGATATGTGTAAGGGAGTTCAATATCTGAATGAAATCAAGGATTCTGTTGTTGCCGGTTTCCAATGGGCCTCTAAAGAAGGTGCATTGGCCGAAGAAAACATGAGAGGCATCTGTTTTGAAGTGTGCGATGTGGTTCTTCATGCTGATGCCATCCACAGAGGAGGAGGTCAAGTCATTCCCACAGCTAGGAGGGTAATTTACGCTTCTCAGTTGACAGCCAAACCCAGACTTCTTGAGCCAGTGTACTTGGTGGAAATTCAAGCTCCAGAGCAAGCTCTTGGAGGTATCTACAGTGTTCTTAACCAGAAGCGTGGACACGTATTTGAGGAAATGCAGAGGCCCGGTACCCCTCTTTACAACATCAAGGCATATCTCCCCGTCATCGAGTCGTTCGGATTCTCGAGCACTCTGAGAGCTGCAACGTCTGGACAGGCATTCCCACAGTGTGTGTTTGACCATTGGGACATGATGTCTTCAGATCCATTAGAAAGTGGGTCTCAAGCTGCGCAGTTGGTTGCTGATATCAGGAAGAGGAAGGGATTGAAGGAGCAGATGACTCCATTGTCTGAGTTCGAAGACAAGCTATAA 2496 46.63 MDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKNYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMERLWGENFFDPATKKWTTKNTGSATCKRGYVQFCYEPIKQIIATCMNDQKDKLWPMLQKLGVVMKSEEKDLMGKALMKRVMQTWLPASNALLEMMIFHLPSPATAQKYRVENLYEGPLDDVFASAIRSCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLESGSQAAQLVADIRKRKGLKEQMTPLSEFEDKL 831
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37194833 37197618 - CePI673135_02g019330.1 Cec02g1933 196986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1933 831 FunFam Translation elongation factor 2 557 710 - -
Cec02g1933 831 SUPERFAMILY Translation proteins 330 464 IPR009000 -
Cec02g1933 831 Pfam Elongation factor G C-terminus 712 799 IPR000640 -
Cec02g1933 831 SUPERFAMILY EF-G C-terminal domain-like 472 548 IPR035647 -
Cec02g1933 831 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 830 - GO:0003746(PANTHER)|GO:0003924(PANTHER)|GO:0005829(PANTHER)|GO:0006414(PANTHER)|GO:0043022(PANTHER)|GO:1990904(PANTHER)
Cec02g1933 831 FunFam Translation elongation factor 2 474 551 - -
Cec02g1933 831 Gene3D - 1 225 IPR027417 -
Cec02g1933 831 Gene3D Elongation Factor G (Translational Gtpase), domain 3 474 551 - -
Cec02g1933 831 CDD EF2_II 363 458 - -
Cec02g1933 831 CDD eEF2_snRNP_like_C 715 793 - -
Cec02g1933 831 Gene3D - 711 831 - -
Cec02g1933 831 Pfam Elongation factor Tu domain 2 382 450 IPR004161 GO:0005525(InterPro)
Cec02g1933 831 SUPERFAMILY Ribosomal protein S5 domain 2-like 550 714 IPR020568 -
Cec02g1933 831 CDD EF2 8 218 - -
Cec02g1933 831 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 IPR031157 -
Cec02g1933 831 NCBIfam small GTP-binding protein domain 8 164 IPR005225 GO:0005525(InterPro)
Cec02g1933 831 FunFam Translation elongation factor 2 1 225 - -
Cec02g1933 831 SMART EFG_IV_2 594 710 IPR005517 GO:0005525(InterPro)
Cec02g1933 831 CDD EF2_snRNP_III 475 547 - -
Cec02g1933 831 Pfam Elongation factor Tu GTP binding domain 6 209 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1933 831 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 332 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1933 831 FunFam Translation elongation factor 2 711 831 - -
Cec02g1933 831 FunFam Elongation factor 2 210 314 - -
Cec02g1933 831 FunFam Translation elongation factor 2 331 472 - -
Cec02g1933 831 Gene3D - 558 710 IPR014721 -
Cec02g1933 831 PRINTS GTP-binding elongation factor signature 141 150 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1933 831 PRINTS GTP-binding elongation factor signature 53 61 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1933 831 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1933 831 PRINTS GTP-binding elongation factor signature 89 99 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1933 831 PRINTS GTP-binding elongation factor signature 105 116 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cec02g1933 831 SUPERFAMILY EF-G C-terminal domain-like 715 826 IPR035647 -
Cec02g1933 831 CDD aeEF2_snRNP_like_IV 547 719 - -
Cec02g1933 831 SMART EFG_C_a 712 801 IPR000640 -
Cec02g1933 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 329 IPR027417 -
Cec02g1933 831 Gene3D Translation factors 331 472 - -
Cec02g1933 831 Pfam Elongation factor G, domain IV 598 710 IPR005517 GO:0005525(InterPro)
Cec02g1933 831 Pfam Elongation Factor G, domain III 475 537 IPR041095 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1797 Cec-Chr2:35838041 Cec02g1933 Cec-Chr2:37194833 2.40E-167 dispersed
Cec02g1917 Cec-Chr2:36988332 Cec02g1933 Cec-Chr2:37194833 1.40E-143 dispersed
Cec02g1933 Cec-Chr2:37194833 Cec09g1055 Cec-Chr9:10255804 1.50E-114 dispersed
Cec02g1933 Cec-Chr2:37194833 Cec02g1918 Cec-Chr2:37007107 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1933 K03234 - csv:101208886 1629.77