Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g1933 | ATGGACTTCAAGCATAACATTCGTAATATGTCTGTTATTGCTCATGTCGATCATGGGAAGTCCACTCTCACGGATTCTCTTGTGGCTGCTGCTGGTATCATTGCTCAAGAAGTTGCGGGTGATGTTCGGATGACAGATACCCGTCAAGATGAGGCAGAACGGGGTATTACCATCAAATCGACTGGCATCTCCCTCTATTATGAGATGTCTGATGAATCATTGAAAAATTATAAGGGAGAGAGGCAGGGAAATGAGTACCTTATCAATCTTATTGATTCGCCTGGGCATGTTGACTTCTCATCTGAGGTTACAGCTGCTCTACGAATTACTGATGGTGCGCTTGTGGTGGTGGATTGTGTTGAAGGAGTTTGTGTCCAAACAGAGACAGTGCTTCGTCAGGCGTTGGGAGAGAGGATTCGTCCTGTGTTGACAGTTAACAAGATGGACAGATGCTTCCTTGAGCTTCAAGTAGATGGGGAAGAGGCTTATCAGACCTTCTCGAGAGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAGGATCCACTTCTTGGTGATGTCCAAGTGTATCCTGAGAAGGGAACAGTTGCTTTCTCTGCTGGTTTGCACGGTTGGGCTTTCACCCTGACTAACTTTGCAAAGATGTATGCCTCTAAATTTGGAGTAGACGAGGCTAAGATGATGGAGAGGCTTTGGGGTGAGAACTTCTTTGACCCTGCCACCAAGAAATGGACCACCAAGAACACTGGATCTGCAACGTGCAAGCGTGGATATGTTCAGTTCTGCTATGAACCTATCAAGCAGATCATTGCAACTTGTATGAATGACCAGAAGGACAAGCTATGGCCTATGTTGCAGAAACTTGGAGTTGTCATGAAGTCTGAAGAGAAGGATCTGATGGGAAAAGCATTGATGAAGCGAGTCATGCAAACGTGGCTCCCAGCAAGCAATGCTCTTTTGGAAATGATGATCTTTCATCTCCCTTCCCCTGCCACGGCCCAAAAGTATCGTGTGGAGAATTTGTATGAGGGTCCACTAGATGATGTGTTTGCAAGTGCCATCAGAAGTTGTGACCCTGAGGGACCTCTTATGCTTTATGTATCAAAGATGATTCCTGCATCGGACAAGGGCAGGTTCTTTGCCTTCGGTCGTGTCTTCTCTGGGAGGGTTTCAACTGGTTTGAAAGTTAGAATCATGGGTCCCAACTATGTTCCTGGTGAGAAGAAAGACTTGTATGTTAAGAGCGTCCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACTGTGGAGGATGTGCCTTGTGGTAACACTGTTGCCATGGTTGGATTGGATCAATTCATCACAAAGAATGCTACTCTGACAAACGAGAAGGAAGTTGATGCTCATCCAATTCGAGCCATGAAATTTTCTGTATCTCCCGTTGTGCGTGTGGCTGTTCAGTGCAAGGTGGCATCTGATCTTCCCAAGCTCGTGGAAGGGCTTAAACGTCTGGCGAAGTCAGATCCTATGGTTGTGTGTACCATGGAGGAATCTGGTGAGCACATTGTTGCTGGTGCCGGAGAACTACATCTTGAGATCTGTCTGAAGGATTTGCAAGAGGATTTCATGGGTGGAGCTGAGATCATAAAATCTGACCCTGTTGTCTCTTTCCGTGAAACCGTCCTTGAGAGGTCATGCCGCACAGTGATGAGTAAATCCCCCAACAAACACAATCGTCTATACATGGAAGCACGACCCATGGAGGAAGGACTGGCAGAGGCTATCGATGATGGCCGCATTGGACCACGAGACGATCCTAAAGTTCGTTCTAAAATTTTGTCGGAGGAATTCGGTTGGGACAAAGATCTTGCCAAGAAGATTTGGTGCTTTGGTCCTGAGACTACTGGCCCCAACATGGTGGTTGATATGTGTAAGGGAGTTCAATATCTGAATGAAATCAAGGATTCTGTTGTTGCCGGTTTCCAATGGGCCTCTAAAGAAGGTGCATTGGCCGAAGAAAACATGAGAGGCATCTGTTTTGAAGTGTGCGATGTGGTTCTTCATGCTGATGCCATCCACAGAGGAGGAGGTCAAGTCATTCCCACAGCTAGGAGGGTAATTTACGCTTCTCAGTTGACAGCCAAACCCAGACTTCTTGAGCCAGTGTACTTGGTGGAAATTCAAGCTCCAGAGCAAGCTCTTGGAGGTATCTACAGTGTTCTTAACCAGAAGCGTGGACACGTATTTGAGGAAATGCAGAGGCCCGGTACCCCTCTTTACAACATCAAGGCATATCTCCCCGTCATCGAGTCGTTCGGATTCTCGAGCACTCTGAGAGCTGCAACGTCTGGACAGGCATTCCCACAGTGTGTGTTTGACCATTGGGACATGATGTCTTCAGATCCATTAGAAAGTGGGTCTCAAGCTGCGCAGTTGGTTGCTGATATCAGGAAGAGGAAGGGATTGAAGGAGCAGATGACTCCATTGTCTGAGTTCGAAGACAAGCTATAA | 2496 | 46.63 | MDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKNYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMERLWGENFFDPATKKWTTKNTGSATCKRGYVQFCYEPIKQIIATCMNDQKDKLWPMLQKLGVVMKSEEKDLMGKALMKRVMQTWLPASNALLEMMIFHLPSPATAQKYRVENLYEGPLDDVFASAIRSCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLESGSQAAQLVADIRKRKGLKEQMTPLSEFEDKL | 831 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 37194833 | 37197618 | - | CePI673135_02g019330.1 | Cec02g1933 | 196986 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g1933 | 831 | FunFam | Translation elongation factor 2 | 557 | 710 | - | - | |
Cec02g1933 | 831 | SUPERFAMILY | Translation proteins | 330 | 464 | IPR009000 | - | |
Cec02g1933 | 831 | Pfam | Elongation factor G C-terminus | 712 | 799 | IPR000640 | - | |
Cec02g1933 | 831 | SUPERFAMILY | EF-G C-terminal domain-like | 472 | 548 | IPR035647 | - | |
Cec02g1933 | 831 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 1 | 830 | - | GO:0003746(PANTHER)|GO:0003924(PANTHER)|GO:0005829(PANTHER)|GO:0006414(PANTHER)|GO:0043022(PANTHER)|GO:1990904(PANTHER) | |
Cec02g1933 | 831 | FunFam | Translation elongation factor 2 | 474 | 551 | - | - | |
Cec02g1933 | 831 | Gene3D | - | 1 | 225 | IPR027417 | - | |
Cec02g1933 | 831 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 474 | 551 | - | - | |
Cec02g1933 | 831 | CDD | EF2_II | 363 | 458 | - | - | |
Cec02g1933 | 831 | CDD | eEF2_snRNP_like_C | 715 | 793 | - | - | |
Cec02g1933 | 831 | Gene3D | - | 711 | 831 | - | - | |
Cec02g1933 | 831 | Pfam | Elongation factor Tu domain 2 | 382 | 450 | IPR004161 | GO:0005525(InterPro) | |
Cec02g1933 | 831 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 550 | 714 | IPR020568 | - | |
Cec02g1933 | 831 | CDD | EF2 | 8 | 218 | - | - | |
Cec02g1933 | 831 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 46 | 61 | IPR031157 | - | |
Cec02g1933 | 831 | NCBIfam | small GTP-binding protein domain | 8 | 164 | IPR005225 | GO:0005525(InterPro) | |
Cec02g1933 | 831 | FunFam | Translation elongation factor 2 | 1 | 225 | - | - | |
Cec02g1933 | 831 | SMART | EFG_IV_2 | 594 | 710 | IPR005517 | GO:0005525(InterPro) | |
Cec02g1933 | 831 | CDD | EF2_snRNP_III | 475 | 547 | - | - | |
Cec02g1933 | 831 | Pfam | Elongation factor Tu GTP binding domain | 6 | 209 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec02g1933 | 831 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 5 | 332 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec02g1933 | 831 | FunFam | Translation elongation factor 2 | 711 | 831 | - | - | |
Cec02g1933 | 831 | FunFam | Elongation factor 2 | 210 | 314 | - | - | |
Cec02g1933 | 831 | FunFam | Translation elongation factor 2 | 331 | 472 | - | - | |
Cec02g1933 | 831 | Gene3D | - | 558 | 710 | IPR014721 | - | |
Cec02g1933 | 831 | PRINTS | GTP-binding elongation factor signature | 141 | 150 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec02g1933 | 831 | PRINTS | GTP-binding elongation factor signature | 53 | 61 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec02g1933 | 831 | PRINTS | GTP-binding elongation factor signature | 9 | 22 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec02g1933 | 831 | PRINTS | GTP-binding elongation factor signature | 89 | 99 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec02g1933 | 831 | PRINTS | GTP-binding elongation factor signature | 105 | 116 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cec02g1933 | 831 | SUPERFAMILY | EF-G C-terminal domain-like | 715 | 826 | IPR035647 | - | |
Cec02g1933 | 831 | CDD | aeEF2_snRNP_like_IV | 547 | 719 | - | - | |
Cec02g1933 | 831 | SMART | EFG_C_a | 712 | 801 | IPR000640 | - | |
Cec02g1933 | 831 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 329 | IPR027417 | - | |
Cec02g1933 | 831 | Gene3D | Translation factors | 331 | 472 | - | - | |
Cec02g1933 | 831 | Pfam | Elongation factor G, domain IV | 598 | 710 | IPR005517 | GO:0005525(InterPro) | |
Cec02g1933 | 831 | Pfam | Elongation Factor G, domain III | 475 | 537 | IPR041095 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1797 | Cec-Chr2:35838041 | Cec02g1933 | Cec-Chr2:37194833 | 2.40E-167 | dispersed | |
Cec02g1917 | Cec-Chr2:36988332 | Cec02g1933 | Cec-Chr2:37194833 | 1.40E-143 | dispersed | |
Cec02g1933 | Cec-Chr2:37194833 | Cec09g1055 | Cec-Chr9:10255804 | 1.50E-114 | dispersed | |
Cec02g1933 | Cec-Chr2:37194833 | Cec02g1918 | Cec-Chr2:37007107 | 0.00E+00 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g1933 | K03234 | - | csv:101208886 | 1629.77 |