Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1943 ATGAACAAAAGAGAAGATCGATCGAGTATGTCGCAGAGCAGTGGGCCTGATTTCAATTTATCGGATGAAATTTTGGCGGTGATTCCAACGGATCCATATGATCAGCTCGATCTTGCGCGTAAAATCACCTCCATGGCGATTGCTTCTCGTGTGTCGAATCTTGAAGCTGACATGATAAGGATGAAGCACAAGCTTAAAGAGAAGGAAAAAACCATTTATGACCTACAGGAGAAGTTGTCTCACCTCGAGCACGCGAACCAGGAAGCTGAATCTAGGTTGAAGATTGCGCTTGATGATAATATGAGGCTTTCCAGGGAACGGGATTCACTATCAATGACTTCAAAGAAACTTGGACGTGATTTGGCAAAGCTGGAGACATTTAAAAGACAACTTATGCTATCATTGAGTGATGAATCCTCTCAAACTGAAACTGTTGATATTGGGACCTGTGATCAAGCAGTTCCGAAAACATATACTGACAAGGATGAGGTAACTAATGGACACACCACACGCTCGTTCGGTGGTTCTACAGAAACGAGAAGCACAATAGATGAAGGAAAACATATTGGACAGAGATTTTCATCGCCGTATATCACCCCAAGGCTCACTCCATCTGCAACTCCAAAAATTATTTCAACGAGTGTATCCCCCAGAGGGTATTCCACCGTTGCTTCTCCACAAATAACGTCTGGTTCAACTTCTCCAACAAAACCCTCATATGATGGACGGATTGCACTATCTCCATGGTACCCATCAAGCCAGCAGTCTTCAGCAGCAAGTTCTCCTCCTCGTTCTCGTCAACTGGCTGGTCGCCCTGCTCGAGTGGATGGCAAGGAATTTTTCCGCTTAGCCAGGAGTCGTCTGCAATACGAGCAGTTTAGTGCCTTCCTTTCGAACATAAAGGAACTCAATGCTCAAAAGCAGACTAGAGAGGAAACTTTAAGAAAAGCAGAAGAGATATTTGGGACAGATAACAAAGATCTTTTTCTGTCATTTCAAGGATTGCTTAACCGCAATGTTCATTAG 1026 43.76 MNKREDRSSMSQSSGPDFNLSDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMIRMKHKLKEKEKTIYDLQEKLSHLEHANQEAESRLKIALDDNMRLSRERDSLSMTSKKLGRDLAKLETFKRQLMLSLSDESSQTETVDIGTCDQAVPKTYTDKDEVTNGHTTRSFGGSTETRSTIDEGKHIGQRFSSPYITPRLTPSATPKIISTSVSPRGYSTVASPQITSGSTSPTKPSYDGRIALSPWYPSSQQSSAASSPPRSRQLAGRPARVDGKEFFRLARSRLQYEQFSAFLSNIKELNAQKQTREETLRKAEEIFGTDNKDLFLSFQGLLNRNVH 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37313951 37317477 - CePI673135_02g019430.1 Cec02g1943 196996

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1943 341 MobiDBLite consensus disorder prediction 160 273 - -
Cec02g1943 341 MobiDBLite consensus disorder prediction 248 264 - -
Cec02g1943 341 Coils Coil 51 106 - -
Cec02g1943 341 PANTHER OS03G0659800 PROTEIN 10 341 - -
Cec02g1943 341 Coils Coil 300 320 - -
Cec02g1943 341 MobiDBLite consensus disorder prediction 196 240 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1943 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1943 Cec-Chr2:37313951 Cec05g0671 Cec-Chr5:5421996 1.50E-44 dispersed
Cec02g1943 Cec-Chr2:37313951 Cec06g0564 Cec-Chr6:6247412 2.30E-45 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g1084 . . . . . . . . . . . . . . . . Cpe16g00719 . . . . . . . Cla02g01816 Cam02g1922 Cec02g1943 Cco02g1987 Clacu02g1904 Cmu02g1851 Cre02g2165 . . . . . . . Cme11g01598 . . . . . . . Bma12g00594 . . . . . . . . Cpe05g01035 Bhi10g00960 Tan05g0605 . . Hepe08g0632 . . . . . . . . . . Csa06g01166 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010490 1 2 0 1 1 1 0 1 1 0 0 1 1 1 1 2 1 1 1 1 1 1 1 1 1 0 1 3 4 1 32