Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1950 ATGCCTATGGCTACTGCACCCTTGAACAAAATTGAGCGAGCCCATCAGATGTACCGTGAAGGGCTTTATGTCGAAGCCCTGAGATTTTACACTGAAGCTCTTGCCATGGCCAAAACCAAGTCCCAGAGGATTGCGCTTCATAGTAACAGAGCTGCTTGCCATTTGAAACTTCATGATTTCAAGAAGGCAGCGGAAGAATGTACATGGGTTCTTGAACTTGATCACAAGCACACTGGAGCTCTAATGCTTCGTGCCCAGACTCTTGTCACACTCAAAGAATACCATTCTGCTCTCTTTGATGTTAACAGACTTATAGAATTGAACCCATCATCAGAAGTTTATCAGAATCTTCACACTCGACTCAAGACGCAATTGTCGCTTGCTCCAATACCTGAATCAGAAGTAGAGCTTGAAGAAGAGGAGGAAGAAGAGGAGGAAGAAGAAGAATGCGCTGTCGAGTTCAGTGCATATGCTGCCAAAGAGAAGTGCAATGAGGGAAAAGAAAATGTTGTCGCTCCGAGTATTGCACAGGTACAGAAACCTGAGCATAATTGCAATTTGATTGAAAAGAACATTATCCAGACTACTCAGGGCAACTGTGGATTATCTGAAGAAGAAAGGGGCAATCAGAAAGTTGAGGTGAAAATGAATACTAAAAGTGAAGTTGTTGCTCCTCAAGCACAAAGCAAGAAGGGCACAACTGACCTAGGTCCCAATGGCTGGCAAACAATCCCAAAACCAAAAGGTCACTCAGCTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGATGATGACGATGAAGAAGAAGACTCAGGACCTCAATTCCGTTTTCGTGTTAGAACTGTTGGTGTTAAACCTGTGAAATGA 885 43.39 MPMATAPLNKIERAHQMYREGLYVEALRFYTEALAMAKTKSQRIALHSNRAACHLKLHDFKKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLHTRLKTQLSLAPIPESEVELEEEEEEEEEEEECAVEFSAYAAKEKCNEGKENVVAPSIAQVQKPEHNCNLIEKNIIQTTQGNCGLSEEERGNQKVEVKMNTKSEVVAPQAQSKKGTTDLGPNGWQTIPKPKGHSALDYARWDRVEDDSSEDDDDDEEEDSGPQFRFRVRTVGVKPVK 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37337862 37339327 - CePI673135_02g019500.1 Cec02g1950 197003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1950 294 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 3 294 - -
Cec02g1950 294 SMART tpr_5 44 77 IPR019734 GO:0005515(InterPro)
Cec02g1950 294 SMART tpr_5 78 111 IPR019734 GO:0005515(InterPro)
Cec02g1950 294 SMART tpr_5 7 40 IPR019734 GO:0005515(InterPro)
Cec02g1950 294 MobiDBLite consensus disorder prediction 219 294 - -
Cec02g1950 294 SUPERFAMILY TPR-like 11 121 IPR011990 GO:0005515(InterPro)
Cec02g1950 294 MobiDBLite consensus disorder prediction 221 240 - -
Cec02g1950 294 Coils Coil 130 150 - -
Cec02g1950 294 Gene3D Tetratricopeptide repeat domain 6 127 IPR011990 GO:0005515(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1950 - - - 0.0