Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1964 ATGGCAGATAATCCTAGAACAGATTCCTTCAGAACAGAGCTTTTGTCCCCTGAGAGCGTGGCTGCGGGAACAGATGGAATGGTAACGAAGGTGCCCTCGTGGCGACTCAATATGGACGAGTTCCGCTTGCCTACTGCAAACACGAGGTCTCATCATGGCATTGTTTATTACTGGAAGTCATGGAACAGGCAGAGAAAGGTTGCTAAGTATTATGAAAGGCAGGAAAGTCTTCTCAAAGGATTCAATGAAGTTGACTCCTACAATGAACTGGGTATCGTGCCTGGAACTTTAACTGAGGATGAAAAGAAGCAAGAGGCGATCAGTGAGAGACGGGCAATATATGCATCCAACATAGCCAACATGTTGATCTTCATCGCTAAAGTTTATGCTTCAGTTGAAAGCAGATCACTAGCAGTTATAGCTTCAACACTAGATTCCCTGTTGGATCTTTTATCGGGGTTCATATTATGGTTTACAGCTAATGCTATGAGAAAGCCAAATCAGTACCGTTATCCTATCGGCAAGAATCGAATGCAACCAGTGGGAATTGTTGTGTTTGCATCAGTCATGGCAACTCTTGGAATACAAATATTGCTTGAATCAGCTAGAGAACTTATTTCAAAGGTTCAACCAGATAGAGATCCAGATAAAGTAAAATGGATGGTTGGAATAATGGCATCCGTGACAGTAGTGAAATTTTGCCTTACAATATACTGTCGTAGATTCACAAATGAAATCATCAGAGCCTATGCCCAAGACCATTTCTTTGATGTAATTACCAATTCAATTGGTCTTGCGACTGCCCTTTTGGCCATCAAATTCTACTGGTGGCTTGATCCCCTTGGGGCTATCCTAATAGCATTGTACACTATTAGCAACTGGTCGAAGACCGTAATGGAAAATGTATGGTCGCTAATAGGGAGGACAGCCCCACCAGACTACTTGGCCAAGCTAACATATCTAGTATGGAATCATCACGAGGAAATCAAACATATTGATACAGTGAGAGCGTATACCTTCGGATGCAACTATTTTGTGGAGGTGGACATAGTGTTGCCTGGGGAAACTTCTCTAAGTCAAGCACATGACATTGGAGAAACACTTCAAGATAAACTTGAACAGCTTGATGAGGTTGATCGAGCTTTCGTTCATGTGGACTTTGAGTTCACTCATAAGCCAGAGCACAAGCCTAAAGCTTCATAG 1203 42.48 MADNPRTDSFRTELLSPESVAAGTDGMVTKVPSWRLNMDEFRLPTANTRSHHGIVYYWKSWNRQRKVAKYYERQESLLKGFNEVDSYNELGIVPGTLTEDEKKQEAISERRAIYASNIANMLIFIAKVYASVESRSLAVIASTLDSLLDLLSGFILWFTANAMRKPNQYRYPIGKNRMQPVGIVVFASVMATLGIQILLESARELISKVQPDRDPDKVKWMVGIMASVTVVKFCLTIYCRRFTNEIIRAYAQDHFFDVITNSIGLATALLAIKFYWWLDPLGAILIALYTISNWSKTVMENVWSLIGRTAPPDYLAKLTYLVWNHHEEIKHIDTVRAYTFGCNYFVEVDIVLPGETSLSQAHDIGETLQDKLEQLDEVDRAFVHVDFEFTHKPEHKPKAS 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37492571 37494438 + CePI673135_02g019640.1 Cec02g1964 197017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1964 400 Gene3D Cation efflux protein transmembrane domain 109 305 IPR027469 -
Cec02g1964 400 FunFam Metal tolerance protein 11 308 388 - -
Cec02g1964 400 FunFam Metal tolerance protein 11 112 305 - -
Cec02g1964 400 Pfam Cation efflux family 115 305 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec02g1964 400 Pfam Dimerisation domain of Zinc Transporter 315 386 IPR027470 -
Cec02g1964 400 NCBIfam cation diffusion facilitator family transporter 110 386 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec02g1964 400 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 32 396 IPR050291 GO:0008324(PANTHER)|GO:0016020(PANTHER)
Cec02g1964 400 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 310 386 IPR036837 -
Cec02g1964 400 Gene3D Cation efflux protein, cytoplasmic domain 312 387 IPR036837 -
Cec02g1964 400 SUPERFAMILY Cation efflux protein transmembrane domain-like 109 307 IPR027469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1420 Cec-Chr2:31428619 Cec02g1964 Cec-Chr2:37492571 1.60E-119 dispersed
Cec02g1964 Cec-Chr2:37492571 Cec03g1456 Cec-Chr3:32484465 4.00E-97 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1964 - - - 0.0