Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1968 ATGACTATGACGGTCGCTGCAAGAGCAATCGCAGCAGCTCGATCAATGGCGCGATCGAGCAGTTTCCCTCTAAAATCTCCATCTTCTTATGTGTTCGCTGCGCAGAAATCTCACTCCCACACTCTTCTCATTCGTCAGATGAGCTCGGAGGCGCAGAGCATCGCTACTCGTCTTCACAGTTCTGGATTGTTACGAAGCCAAGGCCTCATTGGAGGGAAGTGGATTGATGCTTATGATGGGAAGACCATTGAGGTTCACAATCCAGCTAATGGTGAAGTTATAACCAATGTCCCGCTCATGGGCAAAAGGGAGACCGATGATGCTATTTCTTCAGCTTATGATGCTTTTAAGTCTTGGAGCAAGCTCACTGCAGCTGATCGGAGTAATCGCTTACGCAAATGGTATGAGCTCCTAATTGCCCACAAAGAAGAGATTGGACAACTGATAACCTTAGAGCAAGGCAAACCCTTAAAGGAAGCTGTGGGTGAGACTAACTATGGAGCCAGCTTTATTGAGTTCTATTCCGAGGAAGCAAAACGGATATATGGTGACATAATTTCACCAACTATAGCCGATCGTCGAATTTTGGTCTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTGTTACCCCTTGGAACTTTCCGTTGGCTATGATTACGCGGAAGGTTGGACCTGCTCTTGCATGTGGTTGTACGGTGGTCATAAAACCCTCTGAGCTTACCCCCTTGACAGCTTTAGCAGCAGCCAAGCTCTCACTTCAAGCTGGAATTCCCCCAGGTGTTGTGAATGTGGTTATGGGAGATGCTCCTGCTATTGGCGATGCTATACTCGCAAGTTCTCAGGTAAGAAAGATCACGTTTACTGGCTCAACAGCAGTTGGAAAAAAGTTGATGGCAGGAGCTGCTGGAACTGTTAAAAGGGTGTCCTTTGAACTTGGTGGTAATGCCCCTTGCATAGTATTTGATGACGCAGATGTGGATGTTGCAGTAAAAGGAGCTGATTATGGCTTTGAAACAATCCTGCTCAACATGATTAATGTAATTAGCACTTACCACGATGCATCAATATCTATTTGTAAGTGCATACTACCTAGGGATGTGGGTCTATTCAACCACGACTCTTTCCTGCAATTGCAGCAAAGTTCCGAAATAGTGGACAGACTTGTGTTTGTGCCAATAGAATTCTTGTTCAAGAAGGTATTAACAGATGTATACTTCAGTTCTGAAGGATGCTTCGTTTGCTCGTTTAAAAGATGGCTTACTGATATTGGAATCTACGAGAAATTTACAAATGCTTTCTCAAAAGCTGTGCAAAATCTGCAAGTTGGTGATGGGTTTGGTGAAGGTGTAGCTCAGGGTCCTTTAATTAATGAAGCCGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCTACTACAAAGGGAGCAAAAGTTCTTCTTGGTGGTAAAAGACACAGCCTTGGGATGACATTTTTTGAGCCTACAGTTATTGCTGACGTGAATAGTGACATGCTTGTATCCAGGGAGGAAGTATTTGGTCCCGTGGCACCCTTACTGCAATTCAGAACAGAGGAGGAAGCAATTGCTCTCGCTAATGACACCAATGCAGGATTAGCTGCTTACATATTCACAAATAATATTCAACGTTCATGGAGAGTGACTGAAGCTCTTGAATACGGAATGGTTGGTGTTAATGAAGGCTTAATTTCTACAGAGGTGGCTCCATTTGGTGGCGTTAAGGAGTCAGGCCTTGGAAGGGAAGGGTCGAAATATGGGATGGACGAGTATCTTGAGCTGAAATATGTTTGCTTGGGGAATATGGACCGCCATTGA 1830 44.64 MTMTVAARAIAAARSMARSSSFPLKSPSSYVFAAQKSHSHTLLIRQMSSEAQSIATRLHSSGLLRSQGLIGGKWIDAYDGKTIEVHNPANGEVITNVPLMGKRETDDAISSAYDAFKSWSKLTAADRSNRLRKWYELLIAHKEEIGQLITLEQGKPLKEAVGETNYGASFIEFYSEEAKRIYGDIISPTIADRRILVLKQPVGVVGVVTPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAKLSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKITFTGSTAVGKKLMAGAAGTVKRVSFELGGNAPCIVFDDADVDVAVKGADYGFETILLNMINVISTYHDASISICKCILPRDVGLFNHDSFLQLQQSSEIVDRLVFVPIEFLFKKVLTDVYFSSEGCFVCSFKRWLTDIGIYEKFTNAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDATTKGAKVLLGGKRHSLGMTFFEPTVIADVNSDMLVSREEVFGPVAPLLQFRTEEEAIALANDTNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKESGLGREGSKYGMDEYLELKYVCLGNMDRH 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37516053 37527032 + CePI673135_02g019680.1 Cec02g1968 197021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1968 609 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 57 349 IPR016162 GO:0016491(InterPro)
Cec02g1968 609 Pfam Aldehyde dehydrogenase family 74 332 IPR015590 GO:0016491(InterPro)
Cec02g1968 609 Pfam Aldehyde dehydrogenase family 405 601 IPR015590 GO:0016491(InterPro)
Cec02g1968 609 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 383 607 IPR016163 GO:0016620(InterPro)
Cec02g1968 609 FunFam Succinate-semialdehyde dehydrogenase I 80 337 - -
Cec02g1968 609 FunFam Succinate-semialdehyde dehydrogenase I 391 570 - -
Cec02g1968 609 FunFam Aldehyde dehydrogenase, putative 573 599 - -
Cec02g1968 609 SUPERFAMILY ALDH-like 44 334 IPR016161 GO:0016491(InterPro)
Cec02g1968 609 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 309 316 IPR029510 GO:0016491(InterPro)
Cec02g1968 609 CDD ALDH_F5_SSADH_GabD 85 603 - -
Cec02g1968 609 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 58 606 IPR050740 GO:0004777(PANTHER)|GO:0006807(PANTHER)|GO:0009450(PANTHER)
Cec02g1968 609 SUPERFAMILY ALDH-like 404 607 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1968 Cec-Chr2:37516053 Cec06g1889 Cec-Chr6:32192958 6.70E-80 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1968 K17761 - csv:101217352 555.829