Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1974 ATGAAGAAGAAGAGAGAGAAAGAAGAGTGGAATTTCACAAATTTGAGGGCGCAGAGAGCAGAAAGCTACAAAGACTCAAAGAGACAACCACCTCCTCATTTCCGAACCACTTCCCCTCTACTTCAATCGCCATTTCTATGTTATAATATGACCCAATCGCCGGTGCCTCCGTCGTTGGCTCCGCCGCAGCCACCACCATTATACGGCTCCGGAGTTCAGGTCCGTTGCGCCGGCTGTCGTGATGTTTTGGTAGTGGCGCCTGGCCACACCGAGTTCTTCTGCCCATCTTGTCAATTACCTCAGATGTTGCCTCCTGAGCTTTTAGTTAGGGCCCACTCCAAGCCCCTTCCTCCTCCTCCGCTACCGCCGCCACCGCCGTCGCTTCCGTCGTCGATGCCCCTTCCCCCTCCTTTGTCCATACACCATGTACCTGCTCATGGCATTGATCCTACCAAGATGCAGCTCCCCTGTGCTAATTGCAAGGCGCTTCTTAATGTTCCTCATGGTTTAACTAGGTTCGTTTGTCCTCAGTGCGCGGTTGACCTCGCTGTCGATGTCTCCAAGCTCCATCAGTTCTTTCCCTCCCGGCCGCCTCCTGAGGAAGTCAACGAGGTAGCCATTGAAGTGGAAAGAGAAGAAGATGAAGGTGGTACAGTGGGAGAGACATTTACTGAATATCACCCTCCCAAGCTATCCATAGGACCACCTCACCCGGACCCAGTTGTGGAAACATCCTCCTTATCTGCTGTCCAGCCTCCTGAACCTACTTATGATTTAAAAATCAAGGATGATTTAGAAAAGTCAAAAGCTCTTTCATGCTTACAAATTGAGACCTTGGTATATGCTTCTCAGAGACATATGCACCATCTCCCAAATGAGACCAGAGCGGGATTCTTTATTGGAGATGGAGCTGGTGTTGGTAAAGGTCGGACCATTGCAGGTTTATTGTGGGAAAATTGGCACCATGGGAGGAGGAAAGCATTGTGGATTTCGGTTGGCTCAGATTTGAAGTATGATGCTAGGAGAGACTTAGATGATGTAGGTGCAACGTGCATTAAAGTGCATGCTTTGAACAAGCTACCTTATTCAAAGCTTGACTCAAAGTCTGTGGGTATTAGAGAAGGAGTTGTCTTTTTGACATATAGCAGCCTCATAGCATCCTCCGAACGAGGCCGTTCTCGCCTGCAGCAGCTTGTTCAGTGGTGTGGAACAGGATTTGATGGTCTCATCATATTTGATGAGTGCCATAAAGCCAAAAATTTGGTACCAGAAGCTGGAAGCCAGCCAACTAGGACAGGAGAAGCCGTTCTAGAGCTGCAGGATCGACTTCCTGAAGCTCGTATAATTTACTGCTCAGCCACCGGTGCATCTGAGCCACGCAATATGGGCTATATGGTCCGACTTGGGCTTTGGGGAACTGGAACTTCCTTTATTGACTTCAGGGATTTTTTAGGTGCATTGGAGAGAGGGGGTGTTGGGGCTTTAGAACTTGTTGCCATGGACATGAAAGCAAGGGGTATGTATTTGTGTCGCACACTTAGCTACCGAGGAGCTGAATTTGAGATTGTGGAAGCTCCACTAGAAGCTGAGATGATGGAAATGTATACATTAGCAGCTGAATTTTGGGCGAAGTTGCGGGTAGAATTGATGACAGCAAGTGCGTATGTTACTAGTGACAAGCCTAGCACCAACCAACTTTGGCGATTATTTTGGGCAAGCCATCAGCGTTTCTTCAGGCATATGTGTATGTCTGCCAAGGTTCCTGCTACTGTGAGACTAGCTAAGCAAGCATTATTGGAAGATAAATGTGTTGTCATTGGCTTGCAAAGTACTGGAGAGGCACGCACTGAGGAAGCTGTGACAAAATATGGCCTTGAGCTTGATTATTTTGTTTCTGGACCTCGAGAACTATTGCTTAAATTTGTGGAAGAAAATTACCCTTTGCCTGAAAAGCCTGAAACTCTACCTGAGGAGGGAAGTGTCAAGGAACTTCAAAGGAAGAGACACTCGGCAACTCCTGGCATATCACTAAATGGGAGGGTAAGGAAAGCTGCAAAGTGGAAACCTCCAAGTGATGTCGAAAGTGATGAAGAATCTGAAACTGATTCTACTCCCGAATCTACCGAATCAGATGATGAGTTTCAGATTTGTGAGATTTGCAATACTGAAGAGGAAAGGAAAAAGTTACTTCGATGTTCCTGTTGTGAGCAACTTTTTCATCCTGCGTGTCTCGACCCTCCTCTCTTGGATACAGAAACTGCAGAATGGTCATGTCAGTCTTGCAAGGAAAAGACCGATGAGTATCTTAAAGAAAGAAAAGCTGTTATAGCTGAACTTTTGAAAAGGTATGATGCTGCTTCGGATCGTAAGTCTAATTTGTTGACAATTATTCGTTCATTGAATCTTCCAAACAATCCTTTGGATGATATTATCGATCAGCTTGGTGGCCCTGATAAGGTAGCGGAAATAACTGGAAGAAGGGGAATGCTTGTAAGGGCCCCCAACGGAAAGGGTGTTACTTACCAGCCACGAAACTCGAAGGATGTGACTATGGAGATGGTCAACATGCATGAGAAACAACTGTTTATGGATGGTAAGAAGTTTGTCGCTATCATTTCTGAAGCTGGATCAGCTGGTGTTTCACTGCAGGCCGACAGAAGAGCTGCAAATCAGAAAAGAAGAGTTCATTTTACTTTAGAACTCCCTTGGAGTGCTGATCGAGCCATTCAACAATTTGGACGGACTCATCGCTCTAATCAAGCTTCAGCACCCGAATACAGGCTGCTTTTCACAAATCTCGGTGGAGAACGCAGGTTTGCATCAATTGTTGCCAAGAGATTAGAATCACTTGGAGCCCTAACCCAAGGAGATCGAAGGGCTGGGTTGTCACTTAGTGCATATAATTATGACAGTGCTTATGGGAAAACGGCCTTGACGATGATGTACAGAGGAATAATGGAGCAGGATGCCTTGCCCGTTGAACCTCCTGGTTGCTCATCTGAGAAACCTGATTCAATCCGTGATTTTATTGAGAATGCAAAAGCTGCTCTTAATTCTGTGGGAATAATTAGGGACACCGTACTTGCGTCTGGGAAGGACTTCGGAAAGACCTCTGGTCGTATTGTTGAGTCAGACATGAATGATATTGGACGTTTTCTTAATCGGCTTTTGGGCCTCCCGCCTGAGATTCAAAATAGGATTTTTGAGTTATTTGTCAGCATATTGGATCTTCTAATTCAGAAAGCACGCATTGAAGGGAATCTTGATTCTGGAATTGTTGATATGAGAGCCAATGTTATTGAATTACGAGGAAGTCCAAAGACAGTTCATGTTGATCCTGTCTCTGGGGCATCGACTATGCTGTTTACTTTCTCTTTGGATCGTGGTATAACTTGGGAGTCTGCGAGCACCATTCTTGATGAGAAGCAAAAGGATGGGCTTGGTTCAACCAATGATGGGTTCTATGAATCCAGGAGGGACTGGTTGGGAAGATGCCACATCATATTAGCCTTTGAAAGTTCTGTTCCTGGAATGTATAAAATTGTCCGCCCAGCTGTTGGGGAGTCACTAAGGGAAATGCCTCTCTCTGAGTTACGAAACAAATATCGAAAAACATCATCTTTAGAGAAGGCTCGTAATGGGTGGGAAGATGAGTATGATATTTCCTCAAAACAGTGCATGCACGGACCGAAGTGTAAGCTTGGCAACTTTTGTACGGTTGGCAGGAGAATACAGGAAGTTAATGTTTTGGGTGGCCTTATTCTTCCTGTTTGGGGAACTATTGAAAATGCCCTTTCTAAGCAGGCCCGCCAAAGTCATCAGCGGCTTCGTGTAGTACGTATAGAAACCACAACAGAAAAACAGAGAATAGTTGGGCTGTTTGTTCCAAATGCAGCTGTTGAATCAGTGCTTCAAGGTTTAGCCTGGGTACAAGATGTAGATGCTTGA 3948 45.62 MKKKREKEEWNFTNLRAQRAESYKDSKRQPPPHFRTTSPLLQSPFLCYNMTQSPVPPSLAPPQPPPLYGSGVQVRCAGCRDVLVVAPGHTEFFCPSCQLPQMLPPELLVRAHSKPLPPPPLPPPPPSLPSSMPLPPPLSIHHVPAHGIDPTKMQLPCANCKALLNVPHGLTRFVCPQCAVDLAVDVSKLHQFFPSRPPPEEVNEVAIEVEREEDEGGTVGETFTEYHPPKLSIGPPHPDPVVETSSLSAVQPPEPTYDLKIKDDLEKSKALSCLQIETLVYASQRHMHHLPNETRAGFFIGDGAGVGKGRTIAGLLWENWHHGRRKALWISVGSDLKYDARRDLDDVGATCIKVHALNKLPYSKLDSKSVGIREGVVFLTYSSLIASSERGRSRLQQLVQWCGTGFDGLIIFDECHKAKNLVPEAGSQPTRTGEAVLELQDRLPEARIIYCSATGASEPRNMGYMVRLGLWGTGTSFIDFRDFLGALERGGVGALELVAMDMKARGMYLCRTLSYRGAEFEIVEAPLEAEMMEMYTLAAEFWAKLRVELMTASAYVTSDKPSTNQLWRLFWASHQRFFRHMCMSAKVPATVRLAKQALLEDKCVVIGLQSTGEARTEEAVTKYGLELDYFVSGPRELLLKFVEENYPLPEKPETLPEEGSVKELQRKRHSATPGISLNGRVRKAAKWKPPSDVESDEESETDSTPESTESDDEFQICEICNTEEERKKLLRCSCCEQLFHPACLDPPLLDTETAEWSCQSCKEKTDEYLKERKAVIAELLKRYDAASDRKSNLLTIIRSLNLPNNPLDDIIDQLGGPDKVAEITGRRGMLVRAPNGKGVTYQPRNSKDVTMEMVNMHEKQLFMDGKKFVAIISEAGSAGVSLQADRRAANQKRRVHFTLELPWSADRAIQQFGRTHRSNQASAPEYRLLFTNLGGERRFASIVAKRLESLGALTQGDRRAGLSLSAYNYDSAYGKTALTMMYRGIMEQDALPVEPPGCSSEKPDSIRDFIENAKAALNSVGIIRDTVLASGKDFGKTSGRIVESDMNDIGRFLNRLLGLPPEIQNRIFELFVSILDLLIQKARIEGNLDSGIVDMRANVIELRGSPKTVHVDPVSGASTMLFTFSLDRGITWESASTILDEKQKDGLGSTNDGFYESRRDWLGRCHIILAFESSVPGMYKIVRPAVGESLREMPLSELRNKYRKTSSLEKARNGWEDEYDISSKQCMHGPKCKLGNFCTVGRRIQEVNVLGGLILPVWGTIENALSKQARQSHQRLRVVRIETTTEKQRIVGLFVPNAAVESVLQGLAWVQDVDA 1315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37584048 37617410 + CePI673135_02g019740.1 Cec02g1974 197027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1974 1315 MobiDBLite consensus disorder prediction 1 31 - -
Cec02g1974 1315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 860 960 IPR027417 -
Cec02g1974 1315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 247 479 IPR027417 -
Cec02g1974 1315 ProSitePatterns Zinc finger PHD-type signature. 717 761 IPR019786 -
Cec02g1974 1315 ProSiteProfiles Zinc finger PHD-type profile. 714 764 IPR019787 -
Cec02g1974 1315 MobiDBLite consensus disorder prediction 649 669 - -
Cec02g1974 1315 Pfam PHD-finger 717 761 IPR019787 -
Cec02g1974 1315 MobiDBLite consensus disorder prediction 114 133 - -
Cec02g1974 1315 Pfam P-loop containing NTP hydrolase pore-1 236 535 IPR039187 -
Cec02g1974 1315 MobiDBLite consensus disorder prediction 649 710 - -
Cec02g1974 1315 FunFam Protein strawberry notch homolog 2 267 467 - -
Cec02g1974 1315 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 662 775 IPR013083 -
Cec02g1974 1315 PANTHER STRAWBERRY NOTCH-RELATED 79 1312 IPR026741 GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0031490(PANTHER)|GO:0042393(PANTHER)
Cec02g1974 1315 SMART PHD_3 716 762 IPR001965 -
Cec02g1974 1315 MobiDBLite consensus disorder prediction 695 710 - -
Cec02g1974 1315 Gene3D - 266 466 IPR027417 -
Cec02g1974 1315 SUPERFAMILY FYVE/PHD zinc finger 705 767 IPR011011 -
Cec02g1974 1315 MobiDBLite consensus disorder prediction 1 40 - -
Cec02g1974 1315 Pfam C-terminal domain on Strawberry notch homologue 805 1094 IPR026937 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29106 PF13872 AAA_34 7.10E-133 CL0023 Cec TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1974 K26273 - csv:101218295 2337.38