Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1977 ATGTTAGGTTACAGGAAGCCAATGTCGCCTATTTCACATTTTTGTTTCTTCTTCCTCTTCTTCTTCCTCTCTGTTAACAACGCATTGGGCGGCCATGACCAAGAAACTGTAAAACTCGATCTACTTCACCGTCACCATCCACAAGTCGCCGAGAAGCTTCACGGCAATATGAAAGTTGAAGATCTCAACGATCGGATCAAGGATATTCACGATCACGACCTCAAACGATATCAAACCATCTCCACATCGTTGAACCGGAAGCAAATTGAGGAGAAATTGAAGGCGGAAGCGGAGGTTGAGACAGCGAAGGATCCGATACTTCCACCGACGTCGCCTACGCCGATAGGGCTGAAAATGATATCAGGTTCAGATTATGGAAGTAGTGAGTATTTTGTTCAATTGAAAGTGGGAACACCACCTCAGACGTTCATGTTGATCGTGGATACCGGAAGCGATCTAACGTGGATAAAATGTAGATATCGGAGGTGTATCGGAAATTGTAGCAGCAAGGCGAATCATAAGAGCCGAAACGAACGGAAAACGAGATTTAGAAATGCGTTTTTGGCGAATTATTCGTCGTCTTTCAAGACCATTCATTGCAGCTCCACGACGTGTACCAGTGACCTCGCGGATCTGTTCTCAATTGGGGAATGCAAAACCCCAAGTAGCCCTTGTATCTATGATTACAGCTACGCAGGAGGAGCAAGTGCAAAGGGAATATTCGCAATCGAGACCCTAACCGTAGACCTAACAAACGGAAAAGAAAAACAACTCCACAATTCTATAATCGGCTGCACCGAATCAGTCCAAGGAAGGATATTCGGCGGAGCCGACGGCGTCATTGGCTTAGGCACTAGCCCCTACTCTTTTACCTACAAAGCCGCCGAAAACGCCAACGGCGGCGGCTTCTCCTACTGCCTTGTCGACCATCTCAGCCACCACACAGCCACCAGCTACTTCATCCTCGGCGCCCCTTCCCCCTCCGCTTCCGCTGCTGCCTCCTCCGTCGTCCCTTCCGGCAACATGACCTTCACCAAACTCTTCGTCGGCGAACCTTACAACAGCTTCTACGGCGTCGATCTCATCGGAATCTCCGCCGACGGCGTCATGCTCAACATTCCTCCCCGCGTTTGGGACATCAATTCCGGCGGCGGTACCATCCTCGACTCCGGAACTAGCCTCACCATGCTGGCGGCGCCGGCGTTCGATATGGTCATGGAAGCTCTGACTCCTAAGCTGAAGCATTTCGAGCAAATTGAAGTCGAACCCTTCGAATTTTGCTTCAATAATAGCCAGTACACCCATGAAATGGCCCCGAAGATCCGATTCCATTTCGGCGACGGCACGATGTTCCAGCCGCCGGTGAAAAGCTACGTTGTGTCGGCGGGTGAATATATTAGCTGTATTGGGTTCGTTTCCATGCCTTTTCCGGCCTACAACATCATCGGGAATATTCTTCAGCAAAATCACCTTTGGCAATTTGATTTCTTTAGGAGAAAAGTCGGTTTTGCCCCCTCTGAATGCGTCTAA 1530 49.54 MLGYRKPMSPISHFCFFFLFFFLSVNNALGGHDQETVKLDLLHRHHPQVAEKLHGNMKVEDLNDRIKDIHDHDLKRYQTISTSLNRKQIEEKLKAEAEVETAKDPILPPTSPTPIGLKMISGSDYGSSEYFVQLKVGTPPQTFMLIVDTGSDLTWIKCRYRRCIGNCSSKANHKSRNERKTRFRNAFLANYSSSFKTIHCSSTTCTSDLADLFSIGECKTPSSPCIYDYSYAGGASAKGIFAIETLTVDLTNGKEKQLHNSIIGCTESVQGRIFGGADGVIGLGTSPYSFTYKAAENANGGGFSYCLVDHLSHHTATSYFILGAPSPSASAAASSVVPSGNMTFTKLFVGEPYNSFYGVDLIGISADGVMLNIPPRVWDINSGGGTILDSGTSLTMLAAPAFDMVMEALTPKLKHFEQIEVEPFEFCFNNSQYTHEMAPKIRFHFGDGTMFQPPVKSYVVSAGEYISCIGFVSMPFPAYNIIGNILQQNHLWQFDFFRRKVGFAPSECV 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37640046 37641771 - CePI673135_02g019770.1 Cec02g1977 197030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1977 509 SUPERFAMILY Acid proteases 122 508 IPR021109 -
Cec02g1977 509 FunFam Aspartyl protease family protein 339 509 - -
Cec02g1977 509 CDD pepsin_A_like_plant 129 508 IPR034161 -
Cec02g1977 509 PANTHER OS07G0603500 PROTEIN-RELATED 25 505 IPR051708 -
Cec02g1977 509 Pfam Xylanase inhibitor N-terminal 130 323 IPR032861 -
Cec02g1977 509 PRINTS Pepsin (A1) aspartic protease family signature 136 156 IPR001461 GO:0004190(InterPro)|GO:0006508(InterPro)
Cec02g1977 509 PRINTS Pepsin (A1) aspartic protease family signature 480 495 IPR001461 GO:0004190(InterPro)|GO:0006508(InterPro)
Cec02g1977 509 PRINTS Pepsin (A1) aspartic protease family signature 386 397 IPR001461 GO:0004190(InterPro)|GO:0006508(InterPro)
Cec02g1977 509 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 145 156 IPR001969 GO:0004190(InterPro)|GO:0006508(InterPro)
Cec02g1977 509 Gene3D Acid Proteases 115 323 IPR021109 -
Cec02g1977 509 ProSiteProfiles Peptidase family A1 domain profile. 130 504 IPR033121 -
Cec02g1977 509 Gene3D Acid Proteases 330 509 IPR021109 -
Cec02g1977 509 Pfam Xylanase inhibitor C-terminal 357 504 IPR032799 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1977 Cec-Chr2:37640046 Cec11g1703 Cec-Chr11:31251670 1.60E-47 dispersed
Cec02g1977 Cec-Chr2:37640046 Cec01g0573 Cec-Chr1:5972735 1.10E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1977 - - - 0.0