Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1998 ATGCAAGATCCAGCGCCATCAAACCCTATCCACACTCCCAATTCCAATCAAATTCCTCCACTAAATGTTGCAGCACCGCCGCCGAAGACTCACAAACCGCCGCCGGTGGCGAATGCGACGGCCTCCTCTTCATCAATGTTTGCCAATGCGAATACTGGCAATACCTCATTTATGCCTAGAGTAGGCTCTCATCATCGGAGAGCTCATTCAGAAGTTAGTTTCCGGTTGCCGGAGGATATGATGGATATATCCGCGTCGGATCCGTTCAATGGCGGTTCGTCCACCGCAAGTCTGGAGGAGATCGGATCGGAAGATGATCTGTTTTCGACCTACATTGATGTGAAGAAGCTTGGAGGTAATGGAGGAGGGAATTTTGTAGATCATAATGGTAATGGCGGAAGTGAAGGTGCTGGTGGTAGTGAAGGGGAGAAGACTTCGAAGCCAAGGCATCGGCATAGTGTTTCGGTGGATGGAACGACGTCGTCGTCGAGTATGTTTGGGGAAATTATGGAAGCGAAGAAAGCTATGCCTCCTGATAAGTTGGCTGAGCTTTGGTCCAGTGATCCCAAACGCGCTAAAAGGATATTGGCAAATCGACAGTCTGCTGCTCGCTCAAAAGAGAGGAAGGCAAGATATATACAAGAATTGGAGCGCAAAGTGCAAACCCTTCAAACAGAAGCAACTACTCTATCAGCCCAATTGACTTTGTTCCAGCGAGACACAACGGGTCTCAGTACTGAAAATACAGAGCTTAAACTTCGGTTACAGGCTATGGAGCAACAAGCCCAATTGCGTGATGCTTTGAACGAAGCATTAAAGAAGGAAGTTGAGAGGCTTAAAATCGCTACCGGGGAAATGATGAGCCCGTCTGAGTCTTTTAACTTAGGAATGCATCACATGGCGTACGCCCCGTCATCTTTCATTCAACTTTCACAGCAACAACCAGGATCTGCTGGCCTTCAAAATATGCAAATGCCACCATATAGCCATTCTCCATCGAATATAACTACTCACCCTCTGCTTCCATCAGAGTCTCATTCACTCTCTGAGGTTCTGCAGACCGACTCTCTTGGCCGATTGCAGGGTCTCGACATCAGTAGTAAAGGATCGTCGCTTGTGAAATCCGAGGGTCCTTCACTCTCTGCTAGTGAAAGCAGTACAACCTTTTGA 1170 47.86 MQDPAPSNPIHTPNSNQIPPLNVAAPPPKTHKPPPVANATASSSSMFANANTGNTSFMPRVGSHHRRAHSEVSFRLPEDMMDISASDPFNGGSSTASLEEIGSEDDLFSTYIDVKKLGGNGGGNFVDHNGNGGSEGAGGSEGEKTSKPRHRHSVSVDGTTSSSSMFGEIMEAKKAMPPDKLAELWSSDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKIATGEMMSPSESFNLGMHHMAYAPSSFIQLSQQQPGSAGLQNMQMPPYSHSPSNITTHPLLPSESHSLSEVLQTDSLGRLQGLDISSKGSSLVKSEGPSLSASESSTTF 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37831623 37834879 + CePI673135_02g019980.1 Cec02g1998 197051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1998 389 MobiDBLite consensus disorder prediction 1 63 - -
Cec02g1998 389 SUPERFAMILY Leucine zipper domain 190 241 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1998 389 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 188 251 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1998 389 Coils Coil 206 233 - -
Cec02g1998 389 MobiDBLite consensus disorder prediction 365 389 - -
Cec02g1998 389 SMART brlzneu 186 250 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1998 389 MobiDBLite consensus disorder prediction 123 165 - -
Cec02g1998 389 MobiDBLite consensus disorder prediction 1 19 - -
Cec02g1998 389 CDD bZIP_plant_RF2 191 240 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1998 389 MobiDBLite consensus disorder prediction 36 59 - -
Cec02g1998 389 Coils Coil 254 285 - -
Cec02g1998 389 FunFam probable transcription factor PosF21 189 242 - -
Cec02g1998 389 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 37 342 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec02g1998 389 Gene3D - 189 242 - -
Cec02g1998 389 MobiDBLite consensus disorder prediction 20 34 - -
Cec02g1998 389 Pfam bZIP transcription factor 190 238 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1998 389 MobiDBLite consensus disorder prediction 312 349 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1998 Cec-Chr2:37831623 Cec07g0571 Cec-Chr7:7129831 6.60E-73 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29108 PF00170 bZIP_1 1.30E-08 CL0018 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1998 - - - 0.0