Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2008 ATGGCGATTACCACTTTTTATTCTCGTAACAAGATGGTTGTAGCTTTAGCAATAACTTTATTGGCGGTGTTCATTGGGAGCTCTTCAGCTCAGCTCTCTCCCAACTTCTACTACGATAGTTGCCCCAAGTTGCTCAGTACCGTTAGAGCCGGTATCCATTCCGCCGTCGCTCAAGAAGCTCGCATGGGTGCTTCGCTCCTTCGCCTTCACTTTCATGATTGTTTCGTTAACGGTTGCGATGGATCCATCCTTCTAGATGATACTCCTACATTTATAGGAGAGCAAACTGCAGCTCCTAACAATAGATCTGTTAGAGGGTTCAACGTGATTGAGAGTATAAAGAAAAACATAGAAAACATTTGTCCTGGCGTTGTCTCTTGTGTTGATATTTTGACTATTTCTGCTCGCGACTCCATTGTAGCACTTGGAGGCCCAAGTTGGAAGGTAAAATTAGGAAGAAGAGATTCTAAAACAGCCAGCTTCTCTGATGTCACTGGTGCTATTCCCCCGCCAACCTCGACCCTCAACACCCTTATCAACCGATTCAACACCAAAGGCCTCTCCCCTCGGGACTTGGTTGCCTTATCTGGGGCTCACACAATTGGGCAAGCAAGATGTTTGTTTTTCAAGAATCGTATATATAACGAGAGCAACATCGACGAGTCGTTTGCTGAGGAGAGACAAAGGAACTGCCCAACCAATGGAGGAGATGACAATCGTGCTCCTTTGGACTTTAGAACCCCAAAGCTTTTTGACAACTACTATTACAAGAACCTCTTGGAGAAGAAGGCTTTGCTCCGCTCTGATCAGGTGCTCCACAATGGTGGATCCACCGATTCCTTGGTTGAACTCTATAGTGACAATAGTGATGCATTTGAGTCTGACTTTGTGGCGGCTATGATCAAGATGGGCGACATTCAGCCGCTCACTGGATCACAGGGTGAGATTCGTAAGATTTGCAGCCGACCCAACTAA 975 46.05 MAITTFYSRNKMVVALAITLLAVFIGSSSAQLSPNFYYDSCPKLLSTVRAGIHSAVAQEARMGASLLRLHFHDCFVNGCDGSILLDDTPTFIGEQTAAPNNRSVRGFNVIESIKKNIENICPGVVSCVDILTISARDSIVALGGPSWKVKLGRRDSKTASFSDVTGAIPPPTSTLNTLINRFNTKGLSPRDLVALSGAHTIGQARCLFFKNRIYNESNIDESFAEERQRNCPTNGGDDNRAPLDFRTPKLFDNYYYKNLLEKKALLRSDQVLHNGGSTDSLVELYSDNSDAFESDFVAAMIKMGDIQPLTGSQGEIRKICSRPN 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37915240 37925856 - CePI673135_02g020080.1 Cec02g2008 197061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2008 324 FunFam Peroxidase 169 303 - -
Cec02g2008 324 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Cec02g2008 324 CDD secretory_peroxidase 31 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec02g2008 324 SUPERFAMILY Heme-dependent peroxidases 31 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cec02g2008 324 ProSiteProfiles Plant heme peroxidase family profile. 31 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 Gene3D - 35 321 - -
Cec02g2008 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 Pfam Peroxidase 48 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 FunFam Peroxidase 35 177 - -
Cec02g2008 324 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2008 324 Gene3D Peroxidase, domain 2 169 303 - -
Cec02g2008 324 PANTHER PEROXIDASE 72-RELATED 20 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2008 Cec-Chr2:37915240 Cec11g0607 Cec-Chr11:6671703 5.60E-110 dispersed
Cec02g2007 Cec-Chr2:37908438 Cec02g2008 Cec-Chr2:37915240 6.20E-133 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2008 K00430 - csv:101204245 579.326