Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2028 ATGGCTACCGAGGCGACCGAAGCCACGACCAAGTTCCAGAGTCCGGATTTTCGTCCGGTACCGTCGCCTCCAAATTTCCATCCCGAGATTATGGTCTCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCAGGGTCTGTTGAGCATATGGGTATGTTTCCGGTTGATACTGTCAAGACCCATATGCAAGCACTTGGTTCATGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTAGGTCAATTTTGAAATCAGAGGGACCGGCTGGGTTTTATCGTGGTATTGGTGCTATGGGTCTTGGAGCTGGACCTGCACATGCTGTATATTTTACTGTCTACGAGAATTGTAAGATGTTTTTCTCCGGTGGGGATCCTAATAATTCTATTGCTCACGCTGCTTCTGGCGTCTGTGCAACGGTGGCGAGTGACGCTGTGTTTACACCGATGGATATGGTTAAACAGAGGCTGCAGCTGAGTAATAATTCCTACAAGGGAGTTTTGGATTGTATCAAAAGGGTCCTTAGAGAGGAGGGTGTTAAAGCATTTTACGCATCATATAGAACTACAGTGTTGATGAATGCTCCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAGAGTGTAAATGATGAACAGTGGATTGTTCATGCGACGGCAGGAGCTGCTGCTGGAGCCTCAGCTGCACTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGTCAGGGTGTATGTGGATGCGATAGATTCAAAAGCGGGTCAATCAGGGACGTAATTCGGACAATACTCAAGAAGGATGGATATAGAGGGCTTATGAGAGGGTGGGTTCCAAGGATGCTCTTTCATGCTCCGGCTGCAGCTATATGCTGGTCGACATATGAAGCGTTAAAGTCTTTCTTCCACGAGCTCAATGGCAGTGGCAGCGACAACTTGACATGA 996 47.09 MATEATEATTKFQSPDFRPVPSPPNFHPEIMVSAHDGLRFWQFMIAGSIAGSVEHMGMFPVDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKMFFSGGDPNNSIAHAASGVCATVASDAVFTPMDMVKQRLQLSNNSYKGVLDCIKRVLREEGVKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPESVNDEQWIVHATAGAAAGASAALVTTPLDVVKTQLQCQGVCGCDRFKSGSIRDVIRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEALKSFFHELNGSGSDNLT 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38055638 38058980 - CePI673135_02g020280.1 Cec02g2028 197081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2028 331 Gene3D Mitochondrial carrier domain 133 330 IPR023395 -
Cec02g2028 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Cec02g2028 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
Cec02g2028 331 Pfam Mitochondrial carrier protein 228 321 IPR018108 -
Cec02g2028 331 Pfam Mitochondrial carrier protein 38 127 IPR018108 -
Cec02g2028 331 Pfam Mitochondrial carrier protein 132 219 IPR018108 -
Cec02g2028 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
Cec02g2028 331 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085(InterPro)
Cec02g2028 331 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085(InterPro)
Cec02g2028 331 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085(InterPro)
Cec02g2028 331 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085(InterPro)
Cec02g2028 331 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085(InterPro)
Cec02g2028 331 PANTHER MITOFERRIN-1-RELATED 33 321 - GO:0015093(PANTHER)|GO:0031966(PANTHER)|GO:0048250(PANTHER)
Cec02g2028 331 SUPERFAMILY Mitochondrial carrier 36 314 IPR023395 -
Cec02g2028 331 FunFam Mitochondrial RNA-splicing protein MRS3 167 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2028 Cec-Chr2:38055638 Cec04g0807 Cec-Chr4:27750092 5.00E-122 dispersed
Cec02g2028 Cec-Chr2:38055638 Cec08g0764 Cec-Chr8:19346605 2.20E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2028 K15113 - csv:101215924 633.639