Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2051 ATGATGTGCAATGGTTGCAATAGGAAATCTGCAAGGCCTAACTTCGTGATGGACGACAGATTTAGACGAGGGGGATTGGGATTTTGTATCTCTGTTTTGCTTGAATTTTCAGCTACAGATGATCTGATTGGATTTAGGAGTGCCGTTGAGGAAGATGGTTATAATATTGATGAGGCAAGCTTGTGGTATGGGAGGATTTTCGGTTCAAAAAAGATGGGGTATGAAGAAAGGACTCCTCTTATGGTTGCAGCCATGTTTGGGAGTATGAATGTTCTGTGTTATATCCTTCACAGTGGTCGTGTTGATGTTAATCGAGCTTGTGGTTCAGATGGCGCAACGACTCTCCATTGTGCTGTTGCTGGTGGTTCTGCTGTTGCGGATCAGGTTGTCAAACTCTTGATTGATGCTTCCGCTGATGTGAGTGCTGTTGATGCAAACGGTAACCGGCCTGGTGATTTGATTGCTCCTGATTTTACTTCAGCCTCCTATTCAAGGAAAAAAGTGTTACAACAATTACTAAATGGTCGTGAAGAAGCCCTTGGTTCATCCGAGTCAATATTTTACGAGAGAGAAACACAGGAGCCGTTGGAGCTATCACCCCCTCGGGCTTCAAGAGATGGGACAGAGAAGAAAGAGTATCCGGTTGATCTCTCACTTCCAGACATCAAGAACGGAATCTATAGCACAGATGAGTTTAGAATGTATACTTTTAAGATCAAACCTTGTACAAGAGCTTACTCTCATGATTGGACAGAGTGTCCATTTGTTCACCCTGGGGAAAATGCAAGGAGGCGGGATCCTAGGAAATACCATTACAGCTGCGTCCCATGTCCAGAATTCAGAAAAGGAACATGTAGGCAGGGGGATGCCTGTGAATATGCTCATGGAATTTTTGAATGTTGGCTCCATCCTGCTCAATATCGTACCCGTCTTTGCAAAGATGAAACTGGATGCACCCGAAAAGTCTGTTTCTTTGCTCACAAGCCGGAAGAACTCCGCCCCTTATATGCTTCAACTGGTTCTGCTGTACTGTCTCCAAGATCAATCTGTGGTTCTTCACTCGACATTGCGTCGATCAGCCCACTTACCCTTGGTTCTCCTACAGCTCTGATACCTCCTTCATCAACTCCACCTTTAACCCCTTCTGGAGTTTCCTCTCCAATGGGTGGAACCATGTGGCAGACTCAATGTAATATGGCGCCCCCGACCTTGCAGCTTCCAGGTAGCAGGCTAAAGGCTTCTTTGAGCGCAAGAGACATAGATATAGATGTTGAGTTACTCGGTCTCGAAAGTCAGCGCCGTAGACAACAACAGCTAATGGATGAGATGTCCTGTCTACCTTCCCCAACCAGATGGCACAATGGCTTGCCAACCCCTCCATCTTTTCCATCCCCGAGGAGTAGAAATGGAGAACTTAATGGACTTGGAGGCATGAACCCTAATAACCTCGAGGACCTTTTCGGGTCTGTAGATCCTGCGATTTTGCCTCAATTACAAGTACTTTCACTGGATTCTGTGGGATCTCAGGTACAATCCCCTTCTGGGATTCAGATGCGCCAAAGCTTGAATCAGTCTTTCCTCTCGAGCTATGCTAACAGCATTGGATCTCCTCCTGCAAGATCATCTCAACCATCTGTGTCTACTGCAGCTAGCGTTCTGAGTTCTAGGGCTGCTGCTTTCGCCAAGCGTAGCCAGAGCTTTATCGAGCGTAGCGTAGTGAACCGTCATTCTGGACTTTCACCCCCAGCTACATCCACAACTGCCATGCCTTTGAGCCTGTCTGATTGGGGTTCACCGGATGGAAAACTAGACTGGGGAATTCGTGGAGAAGAACTCAACAAGTTAAGGAAGTCTGCATCATTTGGGTTCCGAAACAGTTGCACCAGCACTCTTGCCACGTCCACAATGCACGCTGCCACTCTCGAGCCAGACGTGTCGTGGGTTCCGTCCCTGGTGAAGGATGGTCCATCCGAAAATGCTGTGCAGCTGAGTATGAACGAGCAGCAGCAACAGCAGCTTTGTCATCTCGACAATGGCGATTCAAAGCGAAGGTACATGGAACAGGATCAGTTAGTTGCTTGA 2082 47.31 MMCNGCNRKSARPNFVMDDRFRRGGLGFCISVLLEFSATDDLIGFRSAVEEDGYNIDEASLWYGRIFGSKKMGYEERTPLMVAAMFGSMNVLCYILHSGRVDVNRACGSDGATTLHCAVAGGSAVADQVVKLLIDASADVSAVDANGNRPGDLIAPDFTSASYSRKKVLQQLLNGREEALGSSESIFYERETQEPLELSPPRASRDGTEKKEYPVDLSLPDIKNGIYSTDEFRMYTFKIKPCTRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGTCRQGDACEYAHGIFECWLHPAQYRTRLCKDETGCTRKVCFFAHKPEELRPLYASTGSAVLSPRSICGSSLDIASISPLTLGSPTALIPPSSTPPLTPSGVSSPMGGTMWQTQCNMAPPTLQLPGSRLKASLSARDIDIDVELLGLESQRRRQQQLMDEMSCLPSPTRWHNGLPTPPSFPSPRSRNGELNGLGGMNPNNLEDLFGSVDPAILPQLQVLSLDSVGSQVQSPSGIQMRQSLNQSFLSSYANSIGSPPARSSQPSVSTAASVLSSRAAAFAKRSQSFIERSVVNRHSGLSPPATSTTAMPLSLSDWGSPDGKLDWGIRGEELNKLRKSASFGFRNSCTSTLATSTMHAATLEPDVSWVPSLVKDGPSENAVQLSMNEQQQQQLCHLDNGDSKRRYMEQDQLVA 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38237698 38239779 - CePI673135_02g020510.1 Cec02g2051 197104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2051 693 ProSiteProfiles Ankyrin repeat profile. 110 145 IPR002110 GO:0005515(InterPro)
Cec02g2051 693 FunFam Zinc finger CCCH domain-containing protein 66 229 297 - -
Cec02g2051 693 ProSiteProfiles Ankyrin repeat region circular profile. 110 144 - -
Cec02g2051 693 Gene3D - 272 334 - -
Cec02g2051 693 Pfam Ankyrin repeats (3 copies) 75 143 IPR002110 GO:0005515(InterPro)
Cec02g2051 693 SMART ANK_2a 110 142 IPR002110 GO:0005515(InterPro)
Cec02g2051 693 SMART ANK_2a 75 105 IPR002110 GO:0005515(InterPro)
Cec02g2051 693 SUPERFAMILY Ankyrin repeat 72 150 IPR036770 -
Cec02g2051 693 Gene3D - 53 176 IPR036770 -
Cec02g2051 693 SMART c3hfinal6 271 297 IPR000571 GO:0046872(InterPro)
Cec02g2051 693 SMART c3hfinal6 306 329 IPR000571 GO:0046872(InterPro)
Cec02g2051 693 ProSiteProfiles Zinc finger C3H1-type profile. 276 298 IPR000571 GO:0046872(InterPro)
Cec02g2051 693 PANTHER UNKEMPT FAMILY MEMBER 72 654 IPR045234 -
Cec02g2051 693 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 275 296 IPR000571 GO:0046872(InterPro)
Cec02g2051 693 MobiDBLite consensus disorder prediction 191 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2051 Cec-Chr2:38237698 Cec03g1649 Cec-Chr3:34662962 9.70E-51 dispersed
Cec10g1241 Cec-Chr10:26560162 Cec02g2051 Cec-Chr2:38237698 1.60E-130 transposed
Cec10g1729 Cec-Chr10:31956179 Cec02g2051 Cec-Chr2:38237698 1.10E-132 transposed
Cec02g2051 Cec-Chr2:38237698 Cec07g0486 Cec-Chr7:5458420 2.50E-208 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29114 PF00023 Ank 0.0064 CL0465 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2051 - - - 0.0