Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2065 ATGCCAGCCATTACTCGAGCAAATCACTGTAAGATCGAGACTGGAACGAATTTTAACGATGTTACGGTTGCGAGGATGACTGATGGAGGTTCTGTAATGGAAACCACTCCTCCGAAGCGGAAACTGAGATCCAGTGATGTGCAGAGGCAACAAAGCCCTAAATCTGCGCCGGTGAATTGGAAATCGCCTCGTCGGCGCCTTAATTCGAGTCCAAAATGCCCTCCACAGAGCGATGGGAAAACGTTTAACGATGGCTTTTCTAACTTACATAGTTCCCCGATAAGATGCTTGTTGAAGGACCTTATTGTCAAACCAGATTGGAATCCTAAAGATACTGAACATATAAAAACAGCAAAGGAAGCATTGCATGTATCGACAGCTCCAACTACAATCATGTGCCGTGAAGATGAACAAAGTAAAATCTTCAATTTCTGCAAGGCTTGTGTGGAGCAAGAAAAAGCTGGTAGTTTGTATGTTTGCGGGTGTCCAGGAACTGGCAAATCCTTGTCCATGGAAAAAGTGAAAGAGCAGTTGGCTGCTTGGGTGAAAGAGTCAGGTCTTCAGCTTCCAGACATCTTGTCCATAAACTGCACTTCCTTAGCTAACACATCCGATATTTTCATTAAGATGATGGGTGAAGCCCAACCACAAAAGAAAAGGAATGGCTCTTTAACACCCTTGCAACATCTTCAACGCTTGTACTCCCAAAAGGCAGAGTCATCTTGCATGAAGATGATGTTGATAATAGCTGATGAATTGGATTATTTAATTACAAAGGATAAAGCAGTGCTACATGATCTGTTCATGCTCACAACTTTCCCATTTTCAAGATGTATTTTGATAGGAATTGCAAATGCTATTGACTTAGCAGATCGCTTTCTTCCAAGACTTCAGGCTTTGAATTGCAAACCTCAGGTCGTAACTTATAGGGCATATTCCAAGGAACAGATCCTCAAGATTCTTCAACAAAGGTTAATTGTGCTTCCTTTCATTGTCTTTCAGTCGCAAGCACTGGAGCTTTGTGCTAGAAAAGTTGCAGCTGTCTCTGGAGATATGAGAAAAGCTCTCTGTGTTTGCAGGAATGCCATTGAATTGTTGGAGGTGGAACTCAAAGCATCCTCTAAGGAGCTGAACCATAATGACGCATGTGATGCTTCAGCACCACCTGAGCTTGTCAAAAGACAAGAGTCTCAGATTGTGAGGTTGGACCATATGGCTGTTGCCTTATCCAAGACTTTTAAATCACCAGCAGTAGAAACCATACAATCTCTTCCTCAGCATCAACAGATAATTTTATGCTCTGTTGTGAAACTTGTTCGTGGAGGAAAGAAGGATACAACTATAGGAGAGCTAAACAAATCATACGTAGAGATATGTAAATCAACACTAATCCCACCGGTGGGGAGTTTGGAACTTACAAATATGTTCACAGTGCTAAACGACCAGGGGCTTCTCAAACTTGGGCAATCTCGAGATGATAAGATGAGGCGAGTGTTGTTGAAAGTTGATGAAGCTGATGTCATGTTCGCATTACAGATTGGTGCGGTGAACGCTTTTTCCCACCACTCCAAGGTAAACTGA 1581 42.5 MPAITRANHCKIETGTNFNDVTVARMTDGGSVMETTPPKRKLRSSDVQRQQSPKSAPVNWKSPRRRLNSSPKCPPQSDGKTFNDGFSNLHSSPIRCLLKDLIVKPDWNPKDTEHIKTAKEALHVSTAPTTIMCREDEQSKIFNFCKACVEQEKAGSLYVCGCPGTGKSLSMEKVKEQLAAWVKESGLQLPDILSINCTSLANTSDIFIKMMGEAQPQKKRNGSLTPLQHLQRLYSQKAESSCMKMMLIIADELDYLITKDKAVLHDLFMLTTFPFSRCILIGIANAIDLADRFLPRLQALNCKPQVVTYRAYSKEQILKILQQRLIVLPFIVFQSQALELCARKVAAVSGDMRKALCVCRNAIELLEVELKASSKELNHNDACDASAPPELVKRQESQIVRLDHMAVALSKTFKSPAVETIQSLPQHQQIILCSVVKLVRGGKKDTTIGELNKSYVEICKSTLIPPVGSLELTNMFTVLNDQGLLKLGQSRDDKMRRVLLKVDEADVMFALQIGAVNAFSHHSKVN 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38363585 38367621 - CePI673135_02g020650.1 Cec02g2065 197118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2065 526 CDD AAA 149 297 - -
Cec02g2065 526 MobiDBLite consensus disorder prediction 28 84 - -
Cec02g2065 526 Pfam CDC6, C terminal winged helix domain 419 510 IPR015163 -
Cec02g2065 526 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 369 IPR027417 -
Cec02g2065 526 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 38 512 IPR050311 GO:0003688(PANTHER)|GO:0005634(PANTHER)|GO:0033314(PANTHER)
Cec02g2065 526 Pfam AAA domain 153 273 IPR049945 GO:0016887(InterPro)
Cec02g2065 526 SMART AAA_5 153 303 IPR003593 GO:0016887(InterPro)
Cec02g2065 526 SUPERFAMILY Winged helix DNA-binding domain 418 512 IPR036390 -
Cec02g2065 526 Gene3D - 420 510 IPR036388 -
Cec02g2065 526 Gene3D - 111 302 IPR027417 -
Cec02g2065 526 Pfam Cdc6/ORC-like, ATPase lid domain 312 369 IPR054425 -
Cec02g2065 526 CDD Cdc6_C 425 507 IPR015163 -
Cec02g2065 526 PIRSF Cdc6 9 517 IPR016314 GO:0006270(InterPro)|GO:0051301(InterPro)
Cec02g2065 526 FunFam Cell division control protein 112 300 - -
Cec02g2065 526 Gene3D - 303 419 - -
Cec02g2065 526 SMART Cdc6_C_2 432 511 IPR015163 -
Cec02g2065 526 MobiDBLite consensus disorder prediction 48 84 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2065 Cec-Chr2:38363585 Cec08g0257 Cec-Chr8:4836643 4.80E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2065 K02213 - csv:101205741 860.136