Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2125 ATGGGTAATGGGATTGGGAAGCTCGGCGTTTGCTTCACCGGAATCAACGACGGTAGGCGGCGGCCGGATATTTCCGTTCTGTTAACAAATCCACTAGATGAAGGTCTGGGGCACTCGTTTTGCTATGTCCGGCCGGATCCCTTAAGACTTTCGTCATCAAAAGTTCATTCCGAAGAAACCACCACTTTCCGATCAATCTCCGGCGCCTCTGTAAGTGCAAATACATCAACGCCTCTTTCTACTGCTCTTGTTGATCTGTATTCATACAATAGCATTGATCGAGCGGCGGCGTTTGAGAGTTCAACTTCTTTCGCTTCAATCCCTTTGCAACCGATCCCTAGAAACATGATAAATTCTGGTCCGATTTCGGGGAATTTCAATGGAATCCCCTGTTCTGGGCCTTTGGAAAGAGGGTTTTTATCGGGTCCAATCGAGCGAGGGTTTATGTCGGGTCCACTGGATCGGGGGATTTTTTCGGGTCCTCTTGAAAATTCTACATCCACTGAATTTCAGAGGAGTTTTTCCCATGGTGGTGGGTTTAATTCCAGATCTAGATCAAGAAAAAGCCGGTTAATTCGAATTCTGAGAACTGCAATTTCCAAGTCGATTCATCGAGGGCAAAATTCCATTGTGGCTCCGATTAAACCGGTTAAAGAACCCGATTGGATCGTCTTGCCCGAGAAGCATAACGAGAATTTGACTGTGAGTAGTTTGAATTTCAGTAGTGAAGGGAGTTTGGAGGATGATGATTCAATGGAAAGCCAAAATCTGCAGTGGGCTCAAGGAAAAGCAGGGGAAGATCGAGTTCATGTTGTGGTTTCTGAAGAACATGGATGGGTTTTCGTTGGGATTTATGATGGATTTAACGGTCCTGATGCTCCTGATTATCTCTTGTCCAATTTATATTCCTCTGTTCATAAAGAACTTAAAGGTTTGTTATGGGACGAAAAGCTCGATTTCGCGGGTGTTGCTGCTCCGGCAACTTCCCCTGTTCGTTCTGAGAATCCATGTTTAGAAACAAGAGATTTGGAGAGGAATCGAGTGAGTGATGCTTGTTCTCAATGTGTAGAACAAGAGAATCATCCTTGTGTTAGTGGAGATGGGAATTCTGGATTGAATTCTAGGAAAAGAAAAGGTAAGAATTTAAGAGGAAAGTTTAGAGGAGCTGCGGAGAAGTGGGAGGATAATCAACGGCGGTGGAAGTGTGAATGGGACCGAGAAAGATTAGAACTCGATCGGAGGTTAAAGGAGCAGTTGAATCGATCGGGATCGAACGGTTCGAGGTCGATTAATCATTCAGATGTTCTCAAAGCCCTATCCCAAGCATTGAAGAAAACAGAGGAGGCCTATTTGGATATTGCAGACAAGATGCTTGATGAAAATCCTGAACTGGCTTTGATGGGTTCTTGTGTGCTTGTGATGCTTATGAAAGGAGATGATGTTTATGTGATGAATGTTGGTGACAGCCGAGCTGTTTTAGCGCAGAAGGCGGAGCCTGATTATTGGCTCGGGAAGATTCGACAAGACTTGGAGAGGATTAATGAAGAGCCAGTTCATGACATTGAAGCATTAGATTGTGATAGAGCATTCACTTCTACTAACCTTACTGCTTTTCAGCTTTCTATGGATCATAGTACAAGTGTTGATGAGGAAGTTCAGAGAATAAGAAATGAACACCCTGATGATGCTAATGCTGTGATGAACGACCGTGTTAAAGGCTCGTTGAAAGTTACTCGGGCGTTCGGTGCTGGTTTCCTTAAACAGCCTAAATGGAACAATGCATTGTTAGAGATGTTCAGAATCGACTATGTCGGGAGATCGCCATACATCAATTGTTTACCATCTCTCTACCACCATAGATTGGGACCAAAAGACAGGTTTTTGATACTATCATCTGATGGCCTCTACCAATACTTCACAAACGAAGAAGCTGTTTCTGAAGTCGAACTTTTCATCGCATTGCAACCTGAAGGAGACCCGGCTCAACATCTGGTTGAATTACTTCTGTTTCGGGCTGCAAAGAGAGCCGGTATGGATTTCCATGAGTTACTTGAAATACCGCAGGGCGACCGGAGGAAGTATCACGACGATGTATCAATCATTGTAATTTCATTAGAAGGAAGGATATGGAGATCTTGTGTATAA 2145 43.92 MGNGIGKLGVCFTGINDGRRRPDISVLLTNPLDEGLGHSFCYVRPDPLRLSSSKVHSEETTTFRSISGASVSANTSTPLSTALVDLYSYNSIDRAAAFESSTSFASIPLQPIPRNMINSGPISGNFNGIPCSGPLERGFLSGPIERGFMSGPLDRGIFSGPLENSTSTEFQRSFSHGGGFNSRSRSRKSRLIRILRTAISKSIHRGQNSIVAPIKPVKEPDWIVLPEKHNENLTVSSLNFSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSSVHKELKGLLWDEKLDFAGVAAPATSPVRSENPCLETRDLERNRVSDACSQCVEQENHPCVSGDGNSGLNSRKRKGKNLRGKFRGAAEKWEDNQRRWKCEWDRERLELDRRLKEQLNRSGSNGSRSINHSDVLKALSQALKKTEEAYLDIADKMLDENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEEPVHDIEALDCDRAFTSTNLTAFQLSMDHSTSVDEEVQRIRNEHPDDANAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGRSPYINCLPSLYHHRLGPKDRFLILSSDGLYQYFTNEEAVSEVELFIALQPEGDPAQHLVELLLFRAAKRAGMDFHELLEIPQGDRRKYHDDVSIIVISLEGRIWRSCV 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38810974 38813682 + CePI673135_02g021250.1 Cec02g2125 197178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2125 714 Coils Coil 436 456 - -
Cec02g2125 714 Pfam Protein phosphatase 2C 438 498 IPR001932 -
Cec02g2125 714 Pfam Protein phosphatase 2C 532 655 IPR001932 -
Cec02g2125 714 ProSiteProfiles PPM-type phosphatase domain profile. 249 705 IPR001932 -
Cec02g2125 714 Gene3D - 227 710 IPR036457 -
Cec02g2125 714 FunFam probable protein phosphatase 2C 4 224 710 - -
Cec02g2125 714 SUPERFAMILY PP2C-like 263 706 IPR036457 -
Cec02g2125 714 CDD PP2Cc 431 705 IPR001932 -
Cec02g2125 714 PANTHER PROTEIN PHOSPHATASE 2C 240 705 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cec02g2125 714 SMART PP2C_4 250 703 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2125 Cec-Chr2:38810974 Cec05g0719 Cec-Chr5:5934039 1.90E-62 dispersed
Cec10g0188 Cec-Chr10:1847266 Cec02g2125 Cec-Chr2:38810974 2.20E-134 transposed
Cec02g2125 Cec-Chr2:38810974 Cec04g0954 Cec-Chr4:29233427 2.30E-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2125 - - - 0.0