Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2127 ATGGCAGAAGGGGAGGATATTCAGCCACTTGTCTGCGACAATGGAACAGGAATGGTCAAGGCTGGCTTTGCTGGAGATGATGCTCCAAGGGCCGTGTTTCCTAGTATAGTAGGTCGACCAAGGCATACCGGTGTGATGGTTGGAATGGGGCAAAAGGATGCGTATGTTGGGGATGAAGCTCAGTCGAAACGTGGTATATTAACACTGAAATATCCCATTGAACATGGTATAGTGAGCAATTGGGATGATATGGAGAAAATTTGGCATCATACCTTTTACAATGAACTCCGAGTGGCTCCTGAAGAGCACCCCGTCCTTCTCACTGAAGCACCTCTGAACCCTAAGGCAAACCGTGAAAAAATGACCCAAATCATGTTCGAAACCTTCAACACTCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCCCTCTATGCTAGTGGACGCACAACTGGTATTGTCTTAGATTCTGGAGACGGTGTTAGTCACACTGTCCCAATTTACGAGGGGTATGCTCTTCCCCACGCCATACTCCGTCTTGACCTTGCTGGCCGTGACCTCACTGATGCCCTTATGAAAATCTTGACTGAACGTGGGTATTCCTTCACCACCACAGCTGAGCGTGAAATTGTGAGGGACATGAAGGAAAAACTAGCATATATTGCCCTTGACTTTGAGCAAGAACTTGAAACTTCCAAGACTGGTTCATCTGTTGAGAAGAGTTACGAACTGCCTGATGGGCAGGTAATCACAATTGGTGCAGAACGTTTTCGATGTCCTGAAGTTCTTTTCCAGCCTTCAATGATTGGAATGGAAGCTGCAGGCATTCATGAAACAACATATAACTCCATCATGAAATGTGATGTTGATATCAGGAAGGATCTGTATGGAAATATTGTTCTTAGTGGTGGATCAACCATGTTCCCTGGTATTGCTGACAGAATGAGCAAAGAAATAACTGCATTAGCCCCTAGCAGCATGAAAATAAAGGTGGTAGCCCCACCCGAAAGAAAGTACAGTGTCTGGATTGGTGGCTCCATTTTGGCCTCCCTCAGCACGTTTCAGCAGATGTGGATCGCAAAGGCAGAGTATGATGAGTCTGGTCCATCCATTGTGCACAGGAAATGCTTCTGA 1134 46.12 MAEGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDFEQELETSKTGSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38824229 38826090 - CePI673135_02g021270.1 Cec02g2127 197180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2127 377 FunFam Actin, alpha skeletal muscle 3 178 - -
Cec02g2127 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Cec02g2127 377 PRINTS Actin signature 51 62 IPR004000 -
Cec02g2127 377 PRINTS Actin signature 238 254 IPR004000 -
Cec02g2127 377 PRINTS Actin signature 63 85 IPR004000 -
Cec02g2127 377 PRINTS Actin signature 142 161 IPR004000 -
Cec02g2127 377 PRINTS Actin signature 28 37 IPR004000 -
Cec02g2127 377 PRINTS Actin signature 117 130 IPR004000 -
Cec02g2127 377 FunFam Putative actin-related protein 5 341 369 - -
Cec02g2127 377 Gene3D - 140 340 - -
Cec02g2127 377 Pfam Actin 5 377 IPR004000 -
Cec02g2127 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Cec02g2127 377 FunFam Major actin 259 340 - -
Cec02g2127 377 Gene3D - 10 371 - -
Cec02g2127 377 SMART actin_3 7 377 IPR004000 -
Cec02g2127 377 PANTHER ACTIN 8 369 IPR004000 GO:0005737(PANTHER)
Cec02g2127 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
Cec02g2127 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Cec02g2127 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Cec02g2127 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Cec02g2127 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
Cec02g2127 377 FunFam Actin, muscle 182 273 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2127 Cec-Chr2:38824229 Cec07g0364 Cec-Chr7:3589718 8.90E-216 dispersed
Cec05g2846 Cec-Chr5:38693597 Cec02g2127 Cec-Chr2:38824229 2.70E-59 transposed
Cec06g1696 Cec-Chr6:30522860 Cec02g2127 Cec-Chr2:38824229 3.60E-75 transposed
Cec09g0406 Cec-Chr9:3489866 Cec02g2127 Cec-Chr2:38824229 4.40E-55 transposed
Cec09g1439 Cec-Chr9:21203217 Cec02g2127 Cec-Chr2:38824229 5.00E-211 transposed
Cec10g1770 Cec-Chr10:32419855 Cec02g2127 Cec-Chr2:38824229 3.40E-217 transposed
Cec11g0747 Cec-Chr11:8506068 Cec02g2127 Cec-Chr2:38824229 2.30E-94 transposed
Cec02g2127 Cec-Chr2:38824229 Cec04g0957 Cec-Chr4:29257562 7.50E-207 wgd
Cec02g2127 Cec-Chr2:38824229 Cec09g2081 Cec-Chr9:37827119 2.20E-214 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2127 K10355 - mdm:103424317 752.281