Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2134 ATGGCTCACTCTTCTCTTCCAATCTTCTTAGATCCTCCAAATTGGCATCAACCGAATCAGCCAGCAGCTGCAGCAACAAATGATGTTCATCAAGACCCACGTCAGCTTCCGGCAGCATTTCTACAACCGCCGCCGCCGCCAACGGCAGGTCATGGAGGAGGCGGAATCCGGCCGGGTTCTATGGCGTATAGAGCCCGGCTGGCGATGATTCCCCAGCCGGAGGCAGCACTAAAATGCCCTCGTTGTGATTCTACAAACACCAAATTTTGCTATTTCAACAATTACAGCCTTTCTCAGCCGCGCCACTTCTGTAAAGCCTGCCGCCGGTACTGGACCCGCGGCGGCGCTCTTAGAAACGTCCCGGTCGGTGGTGGCTTTCGCAAGAACAAGAAGAAGAAGAAATCTAACCCGTCTAAGTCCCCCACTGCCTCTCAATCTCAAATGGGTAATTCAAGATCAATAATGTCAAGAAGCTGCAACAACATGGAGAGCAGTAGTACAATGAGGGATTTCTCATCACATTCTTCTTTGCCTTCATTAAATATCCTTCCATCTCTTCAACAACATTTTTCTCGTAATTTTGGAAACAACTTCCCCGGAATTCACATCCATAATTCCGCAGTCGCCAGAGAATACGACGTTGAATGGCAACAACAACAACAACCATTCATCGTGGCCGGACTAGAATCTCCGACGACTGCGACAACAACCGCCGCAGCATACACACAAATTGAAGTCAACAACGGAAACAACAACAACTTTGTTGCTAACTCATTACAACAAGCAGCTGGTTTAGTACACTACAATAATAATTGTCATCAACAACTGCAAAATCTGACACCCTTTTCGAGAATTCCTATGAAAAATGAAGAACAAAACCAAGAACAAGGAATATTATTATCAAATTTCTTACGACCAAATGATCACAACAGCCAGTTTTGGGGAAGTAATCATCAAAATTCATGGACGGATCATTTGTCAGCTCTCAGTTCTTCTTCAAGCAGCCATCTTTTGTAA 1017 45.43 MAHSSLPIFLDPPNWHQPNQPAAAATNDVHQDPRQLPAAFLQPPPPPTAGHGGGGIRPGSMAYRARLAMIPQPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGFRKNKKKKKSNPSKSPTASQSQMGNSRSIMSRSCNNMESSSTMRDFSSHSSLPSLNILPSLQQHFSRNFGNNFPGIHIHNSAVAREYDVEWQQQQQPFIVAGLESPTTATTTAAAYTQIEVNNGNNNNFVANSLQQAAGLVHYNNNCHQQLQNLTPFSRIPMKNEEQNQEQGILLSNFLRPNDHNSQFWGSNHQNSWTDHLSALSSSSSSHLL 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38881337 38883080 - CePI673135_02g021340.1 Cec02g2134 197187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2134 338 MobiDBLite consensus disorder prediction 36 59 - -
Cec02g2134 338 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec02g2134 338 MobiDBLite consensus disorder prediction 11 30 - -
Cec02g2134 338 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 71 260 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g2134 338 MobiDBLite consensus disorder prediction 121 172 - -
Cec02g2134 338 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec02g2134 338 MobiDBLite consensus disorder prediction 138 172 - -
Cec02g2134 338 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2134 Cec-Chr2:38881337 Cec02g2196 Cec-Chr2:39408860 3.00E-29 dispersed
Cec10g2109 Cec-Chr10:35744102 Cec02g2134 Cec-Chr2:38881337 1.00E-37 wgd
Cec02g2134 Cec-Chr2:38881337 Cec03g0158 Cec-Chr3:1557615 1.00E-37 wgd
Cec02g2134 Cec-Chr2:38881337 Cec04g0967 Cec-Chr4:29333086 2.50E-36 wgd
Cec02g2134 Cec-Chr2:38881337 Cec07g0366 Cec-Chr7:3608955 3.60E-43 wgd
Cec02g2134 Cec-Chr2:38881337 Cec09g2096 Cec-Chr9:37920979 1.90E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29119 PF02701 zf-Dof 4.80E-33 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2134 - - - 0.0