Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g2182 | ATGGAACCGTTGGATAAACCAGCGCCGAAGTCCTCGCCACTCGCGCCATTTCCTCGGGACTCTCGAGGATCCTTAGAGGTTTTCAATCCCTCGGCCACTTACACGTCCCGACCTCGGGCGAACCCAACGTGGCCCAATTGGGTGGAGCCACGTAGCAGTGCGGAGTCGGACTCAGCCAAACTCGTCGCGAAACCGGCGAGTAAAACCGGCGAGGAAATAACGTCATGGATGGTTTTCAAGGACTCAAACCCTTCCCCACAACCCTCATCCCCACTCGCTCAGAAGACAATATCGGCGATTCTCAGCGACAAATCGCCAACCGGGAAAGCGAAATCGGCGGACGAAGTGGGTTCTGCCGCCCTACGCGCTGCGGAGTGGGGATTAGTACTGAAAACCGATACAGAGACTGGGAAGCCACAAGGCGTTGGAGTTCGAACTTCGGGCGGCGATGAACCGAATACGAAACAGGAAAACTCTAGAAGGACTTCGAATAACTCGGTGCGGAGTTCGGGCGACATGTCGGAAGAAGGGGGAAGAGAAAGAGGGATTCCGAGAGTGTCTGAAGATTTGAAAGACGCTCTGTCGACATTTCAACAAACATTTGTTGTGTCCGATGCTACAAAACCTGATTATCCGATTATGTATGCTAGTGCTGGATTTTTCAAGATGACTGGCTATACTTCCAAGGAGGTTATTGGAAGGAACTGTCGATTTCTACAGGGTGCGGATACAGACCCTGAAGATGTGGCTAAGATCCGAGAAGCTTTACAAGCGGGGATGAGTTACTGTGGAAGGTTGTTGAATTACAAGAAAGATGGGACCCCATTTTGGAACCTTCTTACTATTTCACCAATCAAAGATGATGATGGCAAAGTTCTAAAATTTATTGGAATGCAAGTGGAGGTGAGCAAACACACGGAGGGATTTAAAGATAAGATGGTCCGTCCCAATGGCTTGCCAGAATCCTTGATTCGATATGATGCCCGTCAAAAGGAGATGGCTACAAGTTCGGTAACGGAGCTTGTGCAGGCGGTGAAAAGGCCTCGGTCTGTAAGTGAATATAGGCCTCGGGCTCTAAGTGAATCTATGAACCGCCGGTTATTTAGAAAATCAGGCGGTGGCGGCGGCAGCGGCGGCGGTGACAACAACGACGACAGATTTGAAACCACTATGATTAGGCGAAAGTCAGAGAGTGCAGCACCTCCAACTGGTCGGAAATCGCAGGGAGGAAGTAGAAGATCGATGCAGCGTATCAATGAGCTGCCGGAGAAGAAACCCAAAAAGTCTAGCCGTCGTTCATTTATGGGGATTATGAGGAAAAGTCAATCAAATGTTGAAAGCATTGACATTGAAGATGGTTCCGTGGAGGATAATGAGACCGATGACGATGTTCGGCCAGATAGCGTCGACGACAAAGTAAGGCAGAGGGAAATGAGGAAGGGTATTGATTTAGCTACTACCCTTGAACGTATAGAGAAAAACTTTGTGATTACTGATCCTAGATTGCCTGACAATCCCATTATATTTGCATCTGATAGCTTCCTGGAGCTAACCGAGTACAGTAGAGAAGAAATCTTGGGAAGAAATTGTAGATTTCTGCAAGGTCCTGAAACCGATCGAGCAACCGTCAAGAAAATAAGAGATGCAATCGACAATCAAACAGAAGTTACAGTGCAGCTTATTAACTACACAAAAAGCGGTAAGAAGTTTTGGAACCTGTTTCATCTACAACCTATGCGTGACCAGAAGGGTGAAGTCCAGTATTTTATTGGAGTACAACTCGACGGTAGTCAACATGTGGAACCGCTAAGCAATTGCATGCCGGATAATACTGCAAAGGAAGGCGAGAAATTGATAAAAGAAACCGCAGAAAATGTTGATTTGGCAGCCAGAGAACTTCCTGATGCCAATTTGACACCAGAAGATTTATGGGCAAATCACTCTAAGATGGTTCAACCAAAACCTCACAGAAAGGATAGTCCTTCTTGGAAAGCTATCCAGAAGATTTTAGACAGCGGAGAACAGATAGGACTGAAACATTTCAAGCCAGTGAAGCCTTTGGGATCCGGTGATACTGGCAGCGTGCATTTGGTAGAATTGTGTGGGACTGATCAATATTTTGCAATGAAGGCAATGGATAAGGGTGTAATGCTCAACCGCAACAAGGTCCATAGAGCTTGCGCCGAGAGGGAAATACTTGACATGTTGGATCATCCTTTTCTTCCTGCATTATACGCTTCATTTCAGACAAAAACACATGTTTGTCTTATAACTGATTACTGCCCTGGTGGAGAACTCTTTCTGCTTTTGGATAGACAACCCACAAAGGTCATAAAGGAAGATGCTGTAAGGTTTTATGCTGCTGAAGTTATCGTCGCATTGGAATATCTCCATTGTCAAGGGATAATTTACCGGGATCTAAAGCCTGAGAATGTTCTACTCCAAAGCAACGGACACGTTGTCTTGACGGATTTTGACTTGTCATGTTTGACTTCTTGTAAACCTCAGCTTTTGCTTCCAACAACAAATGAGAAGAAAAAGCAATCAAGAGCTCAACAAGCGCCGATCTTTATGGCCGAACCAATGCGAGCATCGAACTCCTTCGTCGGAACCGAAGAGTACATAGCACCGGAAATCATTACTGGGGCTGGCCATACTAGTGCAGTGGACTGGTGGGCTTTGGGTATTCTTCTATATGAAATGCTTTATGGATACACACCCTTTAGAGGGAAGACAAGGCAAAAGACATTTGCCAACATTCTTCACAAGGATCTTAAATTTCCAAGAAGTATATCGGCTAGTCTCAGTGCAAAGCAGTTAATCTTTAGGTTATTGCATAGAGATCCCAAAAACCGATTAGGTTCTCGAGAAGGAGCTAGCGAAATCAAACGACATCCTTTCTTCCGAGGCGTCAATTGGGCACTGGTTCGTTGCATGAATCCTCCCGAGCTCGAAGCGCCTCTTTTCCAGGCGACCGATGCCGAAAAAGATGCTAATAAGGCATCAGATTTTGATCTAAAAGAACTTGAACTCAGTGTTTTCTGA | 3045 | 45.98 | MEPLDKPAPKSSPLAPFPRDSRGSLEVFNPSATYTSRPRANPTWPNWVEPRSSAESDSAKLVAKPASKTGEEITSWMVFKDSNPSPQPSSPLAQKTISAILSDKSPTGKAKSADEVGSAALRAAEWGLVLKTDTETGKPQGVGVRTSGGDEPNTKQENSRRTSNNSVRSSGDMSEEGGRERGIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQAGMSYCGRLLNYKKDGTPFWNLLTISPIKDDDGKVLKFIGMQVEVSKHTEGFKDKMVRPNGLPESLIRYDARQKEMATSSVTELVQAVKRPRSVSEYRPRALSESMNRRLFRKSGGGGGSGGGDNNDDRFETTMIRRKSESAAPPTGRKSQGGSRRSMQRINELPEKKPKKSSRRSFMGIMRKSQSNVESIDIEDGSVEDNETDDDVRPDSVDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDRATVKKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLSNCMPDNTAKEGEKLIKETAENVDLAARELPDANLTPEDLWANHSKMVQPKPHRKDSPSWKAIQKILDSGEQIGLKHFKPVKPLGSGDTGSVHLVELCGTDQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVIKEDAVRFYAAEVIVALEYLHCQGIIYRDLKPENVLLQSNGHVVLTDFDLSCLTSCKPQLLLPTTNEKKKQSRAQQAPIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPRSISASLSAKQLIFRLLHRDPKNRLGSREGASEIKRHPFFRGVNWALVRCMNPPELEAPLFQATDAEKDANKASDFDLKELELSVF | 1014 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 39231636 | 39243380 | - | CePI673135_02g021820.1 | Cec02g2182 | 197235 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g2182 | 1014 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 496 | 595 | IPR035965 | - | |
Cec02g2182 | 1014 | ProSiteProfiles | PAS repeat profile. | 186 | 257 | IPR000014 | - | |
Cec02g2182 | 1014 | Gene3D | Transferase(Phosphotransferase) domain 1 | 765 | 979 | - | - | |
Cec02g2182 | 1014 | CDD | PAS | 495 | 595 | IPR000014 | - | |
Cec02g2182 | 1014 | MobiDBLite | consensus disorder prediction | 1 | 114 | - | - | |
Cec02g2182 | 1014 | FunFam | LOV domain-containing protein | 680 | 764 | - | - | |
Cec02g2182 | 1014 | MobiDBLite | consensus disorder prediction | 76 | 105 | - | - | |
Cec02g2182 | 1014 | ProSiteProfiles | PAC domain profile. | 554 | 608 | IPR000700 | - | |
Cec02g2182 | 1014 | SMART | pas_2 | 482 | 551 | IPR000014 | - | |
Cec02g2182 | 1014 | SMART | pas_2 | 188 | 257 | IPR000014 | - | |
Cec02g2182 | 1014 | FunFam | LOV domain-containing protein | 469 | 633 | - | - | |
Cec02g2182 | 1014 | MobiDBLite | consensus disorder prediction | 401 | 415 | - | - | |
Cec02g2182 | 1014 | Gene3D | PAS domain | 468 | 633 | - | - | |
Cec02g2182 | 1014 | MobiDBLite | consensus disorder prediction | 147 | 172 | - | - | |
Cec02g2182 | 1014 | SMART | pac_2 | 557 | 599 | IPR001610 | - | |
Cec02g2182 | 1014 | SMART | pac_2 | 263 | 305 | IPR001610 | - | |
Cec02g2182 | 1014 | ProSiteProfiles | PAC domain profile. | 260 | 314 | IPR000700 | - | |
Cec02g2182 | 1014 | ProSitePatterns | Protein kinases ATP-binding region signature. | 687 | 710 | IPR017441 | GO:0005524(InterPro) | |
Cec02g2182 | 1014 | PANTHER | FLIPPASE KINASE 1-RELATED | 633 | 990 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cec02g2182 | 1014 | MobiDBLite | consensus disorder prediction | 347 | 474 | - | - | |
Cec02g2182 | 1014 | MobiDBLite | consensus disorder prediction | 350 | 364 | - | - | |
Cec02g2182 | 1014 | FunFam | Putative LOV domain-containing protein | 765 | 980 | - | - | |
Cec02g2182 | 1014 | MobiDBLite | consensus disorder prediction | 131 | 184 | - | - | |
Cec02g2182 | 1014 | Gene3D | Phosphorylase Kinase; domain 1 | 680 | 764 | - | - | |
Cec02g2182 | 1014 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 207 | 299 | IPR035965 | - | |
Cec02g2182 | 1014 | SUPERFAMILY | Protein kinase-like (PK-like) | 658 | 989 | IPR011009 | - | |
Cec02g2182 | 1014 | SMART | serkin_6 | 681 | 968 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g2182 | 1014 | ProSiteProfiles | Protein kinase domain profile. | 681 | 968 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g2182 | 1014 | CDD | STKc_phototropin_like | 679 | 987 | - | - | |
Cec02g2182 | 1014 | Gene3D | PAS domain | 200 | 356 | - | - | |
Cec02g2182 | 1014 | MobiDBLite | consensus disorder prediction | 26 | 53 | - | - | |
Cec02g2182 | 1014 | MobiDBLite | consensus disorder prediction | 450 | 464 | - | - | |
Cec02g2182 | 1014 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 802 | 814 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g2182 | 1014 | FunFam | Putative LOV domain-containing protein | 200 | 356 | - | - | |
Cec02g2182 | 1014 | Pfam | PAS domain | 207 | 303 | IPR000014 | - | |
Cec02g2182 | 1014 | Pfam | PAS domain | 503 | 595 | IPR000014 | - | |
Cec02g2182 | 1014 | NCBIfam | PAS domain S-box protein | 505 | 595 | IPR000014 | - | |
Cec02g2182 | 1014 | NCBIfam | PAS domain S-box protein | 213 | 305 | IPR000014 | - | |
Cec02g2182 | 1014 | CDD | PAS | 213 | 302 | IPR000014 | - | |
Cec02g2182 | 1014 | ProSiteProfiles | PAS repeat profile. | 484 | 553 | IPR000014 | - | |
Cec02g2182 | 1014 | MobiDBLite | consensus disorder prediction | 435 | 449 | - | - | |
Cec02g2182 | 1014 | Pfam | Protein kinase domain | 683 | 968 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0325 | Cec-Chr2:2987582 | Cec02g2182 | Cec-Chr2:39231636 | 6.80E-236 | dispersed | |
Cec02g2182 | Cec-Chr2:39231636 | Cec02g2311 | Cec-Chr2:40428850 | 4.10E-98 | dispersed | |
Cec02g2182 | Cec-Chr2:39231636 | Cec02g1120 | Cec-Chr2:24727069 | 9.5e-314 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71777 | PF00069 | Pkinase | 7.80E-63 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g2182 | K20715 | - | csv:101214662 | 1868.97 |