Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2182 ATGGAACCGTTGGATAAACCAGCGCCGAAGTCCTCGCCACTCGCGCCATTTCCTCGGGACTCTCGAGGATCCTTAGAGGTTTTCAATCCCTCGGCCACTTACACGTCCCGACCTCGGGCGAACCCAACGTGGCCCAATTGGGTGGAGCCACGTAGCAGTGCGGAGTCGGACTCAGCCAAACTCGTCGCGAAACCGGCGAGTAAAACCGGCGAGGAAATAACGTCATGGATGGTTTTCAAGGACTCAAACCCTTCCCCACAACCCTCATCCCCACTCGCTCAGAAGACAATATCGGCGATTCTCAGCGACAAATCGCCAACCGGGAAAGCGAAATCGGCGGACGAAGTGGGTTCTGCCGCCCTACGCGCTGCGGAGTGGGGATTAGTACTGAAAACCGATACAGAGACTGGGAAGCCACAAGGCGTTGGAGTTCGAACTTCGGGCGGCGATGAACCGAATACGAAACAGGAAAACTCTAGAAGGACTTCGAATAACTCGGTGCGGAGTTCGGGCGACATGTCGGAAGAAGGGGGAAGAGAAAGAGGGATTCCGAGAGTGTCTGAAGATTTGAAAGACGCTCTGTCGACATTTCAACAAACATTTGTTGTGTCCGATGCTACAAAACCTGATTATCCGATTATGTATGCTAGTGCTGGATTTTTCAAGATGACTGGCTATACTTCCAAGGAGGTTATTGGAAGGAACTGTCGATTTCTACAGGGTGCGGATACAGACCCTGAAGATGTGGCTAAGATCCGAGAAGCTTTACAAGCGGGGATGAGTTACTGTGGAAGGTTGTTGAATTACAAGAAAGATGGGACCCCATTTTGGAACCTTCTTACTATTTCACCAATCAAAGATGATGATGGCAAAGTTCTAAAATTTATTGGAATGCAAGTGGAGGTGAGCAAACACACGGAGGGATTTAAAGATAAGATGGTCCGTCCCAATGGCTTGCCAGAATCCTTGATTCGATATGATGCCCGTCAAAAGGAGATGGCTACAAGTTCGGTAACGGAGCTTGTGCAGGCGGTGAAAAGGCCTCGGTCTGTAAGTGAATATAGGCCTCGGGCTCTAAGTGAATCTATGAACCGCCGGTTATTTAGAAAATCAGGCGGTGGCGGCGGCAGCGGCGGCGGTGACAACAACGACGACAGATTTGAAACCACTATGATTAGGCGAAAGTCAGAGAGTGCAGCACCTCCAACTGGTCGGAAATCGCAGGGAGGAAGTAGAAGATCGATGCAGCGTATCAATGAGCTGCCGGAGAAGAAACCCAAAAAGTCTAGCCGTCGTTCATTTATGGGGATTATGAGGAAAAGTCAATCAAATGTTGAAAGCATTGACATTGAAGATGGTTCCGTGGAGGATAATGAGACCGATGACGATGTTCGGCCAGATAGCGTCGACGACAAAGTAAGGCAGAGGGAAATGAGGAAGGGTATTGATTTAGCTACTACCCTTGAACGTATAGAGAAAAACTTTGTGATTACTGATCCTAGATTGCCTGACAATCCCATTATATTTGCATCTGATAGCTTCCTGGAGCTAACCGAGTACAGTAGAGAAGAAATCTTGGGAAGAAATTGTAGATTTCTGCAAGGTCCTGAAACCGATCGAGCAACCGTCAAGAAAATAAGAGATGCAATCGACAATCAAACAGAAGTTACAGTGCAGCTTATTAACTACACAAAAAGCGGTAAGAAGTTTTGGAACCTGTTTCATCTACAACCTATGCGTGACCAGAAGGGTGAAGTCCAGTATTTTATTGGAGTACAACTCGACGGTAGTCAACATGTGGAACCGCTAAGCAATTGCATGCCGGATAATACTGCAAAGGAAGGCGAGAAATTGATAAAAGAAACCGCAGAAAATGTTGATTTGGCAGCCAGAGAACTTCCTGATGCCAATTTGACACCAGAAGATTTATGGGCAAATCACTCTAAGATGGTTCAACCAAAACCTCACAGAAAGGATAGTCCTTCTTGGAAAGCTATCCAGAAGATTTTAGACAGCGGAGAACAGATAGGACTGAAACATTTCAAGCCAGTGAAGCCTTTGGGATCCGGTGATACTGGCAGCGTGCATTTGGTAGAATTGTGTGGGACTGATCAATATTTTGCAATGAAGGCAATGGATAAGGGTGTAATGCTCAACCGCAACAAGGTCCATAGAGCTTGCGCCGAGAGGGAAATACTTGACATGTTGGATCATCCTTTTCTTCCTGCATTATACGCTTCATTTCAGACAAAAACACATGTTTGTCTTATAACTGATTACTGCCCTGGTGGAGAACTCTTTCTGCTTTTGGATAGACAACCCACAAAGGTCATAAAGGAAGATGCTGTAAGGTTTTATGCTGCTGAAGTTATCGTCGCATTGGAATATCTCCATTGTCAAGGGATAATTTACCGGGATCTAAAGCCTGAGAATGTTCTACTCCAAAGCAACGGACACGTTGTCTTGACGGATTTTGACTTGTCATGTTTGACTTCTTGTAAACCTCAGCTTTTGCTTCCAACAACAAATGAGAAGAAAAAGCAATCAAGAGCTCAACAAGCGCCGATCTTTATGGCCGAACCAATGCGAGCATCGAACTCCTTCGTCGGAACCGAAGAGTACATAGCACCGGAAATCATTACTGGGGCTGGCCATACTAGTGCAGTGGACTGGTGGGCTTTGGGTATTCTTCTATATGAAATGCTTTATGGATACACACCCTTTAGAGGGAAGACAAGGCAAAAGACATTTGCCAACATTCTTCACAAGGATCTTAAATTTCCAAGAAGTATATCGGCTAGTCTCAGTGCAAAGCAGTTAATCTTTAGGTTATTGCATAGAGATCCCAAAAACCGATTAGGTTCTCGAGAAGGAGCTAGCGAAATCAAACGACATCCTTTCTTCCGAGGCGTCAATTGGGCACTGGTTCGTTGCATGAATCCTCCCGAGCTCGAAGCGCCTCTTTTCCAGGCGACCGATGCCGAAAAAGATGCTAATAAGGCATCAGATTTTGATCTAAAAGAACTTGAACTCAGTGTTTTCTGA 3045 45.98 MEPLDKPAPKSSPLAPFPRDSRGSLEVFNPSATYTSRPRANPTWPNWVEPRSSAESDSAKLVAKPASKTGEEITSWMVFKDSNPSPQPSSPLAQKTISAILSDKSPTGKAKSADEVGSAALRAAEWGLVLKTDTETGKPQGVGVRTSGGDEPNTKQENSRRTSNNSVRSSGDMSEEGGRERGIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQAGMSYCGRLLNYKKDGTPFWNLLTISPIKDDDGKVLKFIGMQVEVSKHTEGFKDKMVRPNGLPESLIRYDARQKEMATSSVTELVQAVKRPRSVSEYRPRALSESMNRRLFRKSGGGGGSGGGDNNDDRFETTMIRRKSESAAPPTGRKSQGGSRRSMQRINELPEKKPKKSSRRSFMGIMRKSQSNVESIDIEDGSVEDNETDDDVRPDSVDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDRATVKKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLSNCMPDNTAKEGEKLIKETAENVDLAARELPDANLTPEDLWANHSKMVQPKPHRKDSPSWKAIQKILDSGEQIGLKHFKPVKPLGSGDTGSVHLVELCGTDQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVIKEDAVRFYAAEVIVALEYLHCQGIIYRDLKPENVLLQSNGHVVLTDFDLSCLTSCKPQLLLPTTNEKKKQSRAQQAPIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPRSISASLSAKQLIFRLLHRDPKNRLGSREGASEIKRHPFFRGVNWALVRCMNPPELEAPLFQATDAEKDANKASDFDLKELELSVF 1014
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39231636 39243380 - CePI673135_02g021820.1 Cec02g2182 197235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2182 1014 SUPERFAMILY PYP-like sensor domain (PAS domain) 496 595 IPR035965 -
Cec02g2182 1014 ProSiteProfiles PAS repeat profile. 186 257 IPR000014 -
Cec02g2182 1014 Gene3D Transferase(Phosphotransferase) domain 1 765 979 - -
Cec02g2182 1014 CDD PAS 495 595 IPR000014 -
Cec02g2182 1014 MobiDBLite consensus disorder prediction 1 114 - -
Cec02g2182 1014 FunFam LOV domain-containing protein 680 764 - -
Cec02g2182 1014 MobiDBLite consensus disorder prediction 76 105 - -
Cec02g2182 1014 ProSiteProfiles PAC domain profile. 554 608 IPR000700 -
Cec02g2182 1014 SMART pas_2 482 551 IPR000014 -
Cec02g2182 1014 SMART pas_2 188 257 IPR000014 -
Cec02g2182 1014 FunFam LOV domain-containing protein 469 633 - -
Cec02g2182 1014 MobiDBLite consensus disorder prediction 401 415 - -
Cec02g2182 1014 Gene3D PAS domain 468 633 - -
Cec02g2182 1014 MobiDBLite consensus disorder prediction 147 172 - -
Cec02g2182 1014 SMART pac_2 557 599 IPR001610 -
Cec02g2182 1014 SMART pac_2 263 305 IPR001610 -
Cec02g2182 1014 ProSiteProfiles PAC domain profile. 260 314 IPR000700 -
Cec02g2182 1014 ProSitePatterns Protein kinases ATP-binding region signature. 687 710 IPR017441 GO:0005524(InterPro)
Cec02g2182 1014 PANTHER FLIPPASE KINASE 1-RELATED 633 990 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec02g2182 1014 MobiDBLite consensus disorder prediction 347 474 - -
Cec02g2182 1014 MobiDBLite consensus disorder prediction 350 364 - -
Cec02g2182 1014 FunFam Putative LOV domain-containing protein 765 980 - -
Cec02g2182 1014 MobiDBLite consensus disorder prediction 131 184 - -
Cec02g2182 1014 Gene3D Phosphorylase Kinase; domain 1 680 764 - -
Cec02g2182 1014 SUPERFAMILY PYP-like sensor domain (PAS domain) 207 299 IPR035965 -
Cec02g2182 1014 SUPERFAMILY Protein kinase-like (PK-like) 658 989 IPR011009 -
Cec02g2182 1014 SMART serkin_6 681 968 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2182 1014 ProSiteProfiles Protein kinase domain profile. 681 968 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2182 1014 CDD STKc_phototropin_like 679 987 - -
Cec02g2182 1014 Gene3D PAS domain 200 356 - -
Cec02g2182 1014 MobiDBLite consensus disorder prediction 26 53 - -
Cec02g2182 1014 MobiDBLite consensus disorder prediction 450 464 - -
Cec02g2182 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g2182 1014 FunFam Putative LOV domain-containing protein 200 356 - -
Cec02g2182 1014 Pfam PAS domain 207 303 IPR000014 -
Cec02g2182 1014 Pfam PAS domain 503 595 IPR000014 -
Cec02g2182 1014 NCBIfam PAS domain S-box protein 505 595 IPR000014 -
Cec02g2182 1014 NCBIfam PAS domain S-box protein 213 305 IPR000014 -
Cec02g2182 1014 CDD PAS 213 302 IPR000014 -
Cec02g2182 1014 ProSiteProfiles PAS repeat profile. 484 553 IPR000014 -
Cec02g2182 1014 MobiDBLite consensus disorder prediction 435 449 - -
Cec02g2182 1014 Pfam Protein kinase domain 683 968 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0325 Cec-Chr2:2987582 Cec02g2182 Cec-Chr2:39231636 6.80E-236 dispersed
Cec02g2182 Cec-Chr2:39231636 Cec02g2311 Cec-Chr2:40428850 4.10E-98 dispersed
Cec02g2182 Cec-Chr2:39231636 Cec02g1120 Cec-Chr2:24727069 9.5e-314 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71777 PF00069 Pkinase 7.80E-63 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2182 K20715 - csv:101214662 1868.97