Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2184 ATGAGGTTGAGTGAGTACGTGAATTGTGAGATGGAGGAAGGAAGTTACTTACGGCTGCGTTTGGATCTTGGATTTGGATTTGAAAGGATATGCGAGCGGGAAGTGCTTAATCGACTTCCATTGAACGGCGAGCGTGTGTGCTGCACGCGCGAGACCGCGTTCTCGGCGTCAAACGCGTACCAGAACGGAAGCGGAAAAATGGGTTGCTTTAGCCATATCAAAAAGCAGAGGAAAAGATTATTGGGGAGCAATGTACAAAGCATTCAACAAGCTTCTTCAGCAAAAGTAAAAGCGGATCTGAAAGTAAAAACAAGGGAAGAAGTAAAAGAGATGGTTTATGAAAATGAGCAGCTGGCGTCAAATATAAACAAAGAGGTTTCGAGTGAAGCAAAAACAAAGGAAGAGATAGAAACATTTACATTTCAGGAACTTGCAGCCGCAACAAGAAATTTCAAGTCGGATTGCTTTCTGGGTGAAGGAGGATTTGGTAAGGTTTACAAGGGCCATTTGGGAAGAATCCACAAGCTTGTAGCTATAAAGCAACTTGATCGGAATGGGATTCAAGGGGCAAGAGAATTCGTGGTGGAAGTGGTGACATTAAGTTTGGCGAATCATCCAAATCTTGTAAAATTGATTGGGTATTGTGCTGAGGGTGATCAAAGACTCTTGGTTTACGAGTTCATGCCATTAGGCTCATTGGACAAACATTTGCACGATGTTCCACTAGGGAAAAAAGTGCTTGATTGGAATACAAGAATGAAGATAGCAGTGGGAGCAGCAAAAGGATTGGAATATTTACACAACAAAATGAGGCCAGCAGTTATATATAGAGACTTAAAATGCTCCAATATTTTGTTGGGTGAAGGTTATTGGCCAAAGCTTTCAGATTTTGGTCTAGCCAAAGTGGGTCCTAGTGGAGATAACACTCATGTCTCAACTAGAGTTATGGGAACTTATGGATATTGTGCACCAGATTATGCAATGACTGGCCAATTGACATTCAAATGTGATATCTATAGCTTTGGAGTTGTTCTATTGGAACTCATCACTGGAAGAAAAGCCATTGACTATACAAGACCTTCAAAGGAGCTGAGTTTGGTAGCATGGGCAAGACCATTGTTCCGAGACCGAAAGAGGTTCTTGGTAATGGCGGACCCAAGGCTGGACGGTCAATTTCCCATTAGAGGATTGTATCAAGCTCTTGCCATTGCAGCAATGTGTCTACAAGAACAACCTACAATGAGGCCACTTATATCTGAAATCGTCACTGCTTTAAATTTCCTTGCTTCTCAAAATTTTACTCAAAGAAGAAGGGATTAA 1320 41.82 MRLSEYVNCEMEEGSYLRLRLDLGFGFERICEREVLNRLPLNGERVCCTRETAFSASNAYQNGSGKMGCFSHIKKQRKRLLGSNVQSIQQASSAKVKADLKVKTREEVKEMVYENEQLASNINKEVSSEAKTKEEIETFTFQELAAATRNFKSDCFLGEGGFGKVYKGHLGRIHKLVAIKQLDRNGIQGAREFVVEVVTLSLANHPNLVKLIGYCAEGDQRLLVYEFMPLGSLDKHLHDVPLGKKVLDWNTRMKIAVGAAKGLEYLHNKMRPAVIYRDLKCSNILLGEGYWPKLSDFGLAKVGPSGDNTHVSTRVMGTYGYCAPDYAMTGQLTFKCDIYSFGVVLLELITGRKAIDYTRPSKELSLVAWARPLFRDRKRFLVMADPRLDGQFPIRGLYQALAIAAMCLQEQPTMRPLISEIVTALNFLASQNFTQRRRD 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39255015 39262670 - CePI673135_02g021840.1 Cec02g2184 197237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2184 439 Gene3D Transferase(Phosphotransferase) domain 1 228 438 - -
Cec02g2184 439 FunFam Serine/threonine-protein kinase PBS1 228 439 - -
Cec02g2184 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g2184 439 SMART serkin_6 151 428 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2184 439 FunFam probable serine/threonine-protein kinase RLCKVII 123 227 - -
Cec02g2184 439 ProSitePatterns Protein kinases ATP-binding region signature. 157 180 IPR017441 GO:0005524(InterPro)
Cec02g2184 439 PANTHER OS07G0668900 PROTEIN 106 435 - -
Cec02g2184 439 Gene3D Phosphorylase Kinase; domain 1 119 227 - -
Cec02g2184 439 SUPERFAMILY Protein kinase-like (PK-like) 136 432 IPR011009 -
Cec02g2184 439 CDD STKc_IRAK 157 426 - -
Cec02g2184 439 ProSiteProfiles Protein kinase domain profile. 151 428 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2184 439 Pfam Protein kinase domain 156 422 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2184 Cec-Chr2:39255015 Cec03g0211 Cec-Chr3:2232119 2.00E-150 dispersed
Cec10g2072 Cec-Chr10:35445360 Cec02g2184 Cec-Chr2:39255015 1.30E-132 wgd
Cec02g2184 Cec-Chr2:39255015 Cec03g0143 Cec-Chr3:1417739 4.70E-83 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71778 PF00069 Pkinase 7.30E-42 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2184 - - - 0.0