Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2224 ATGGGGAAAGACGTTGAAGTTGCAGAGCAAGGCGAATTCCAAAGCAAAGACTACCAAGACCCACCTCCCGCCCCTCTCATCGACCCTGAAGAACTAACCAAATGGTCTCTTTACAGAGCCGCCATCGCCGAGTTCATCGCCACTCTCCTCTTCCTCTACGTCACCGTTTTGACCGTCATCGGTTACTCCCACCAAAGCGACCCTTCCGTTTCCACCGACCCCTGTAACGGCGTTGGCATCCTCGGCATCGCTTGGGCCTTCGGCGGTATGATTTTCATCCTCGTTTACTGCACCGCCGGTATCTCCGGTGGCCACATTAACCCCGCCGTCACTTTCGGCCTCTTCTTAGCTCGCAAAGTCTCTCTGGTTCGTGCTCTGTTGTACATCATTGCTCAGTGCGCCGGTGCTATTTGCGGCTGTGGCTTGGTTAGAGCCTTCCAATCTGCTTATTATGTTAGATACAACGGCGGTGCTAATATGCTCAGTAATGGGTATAACAAAGGAACTGGATTAGGCGCTGAAATCATCGGTACTTTTGTTCTTGTTTACACTGTTTTCTCTGCTACTGATCCCAAGAGAAACGCCAGAGATTCTCATGTTCCTGTTTTGGCTCCACTCCCAATTGGGTTTGCTGTGTTCATGGTTCATTTGGCTACAATCCCCATCACTGGAACTGGAATTAACCCTGCAAGAAGTTTTGGAGCTGCTGTCATCTTCAACAAAGAGAAAGCCTGGGATGACCAATGGATTTTCTGGGTTGGACCATTTATTGGAGCTGCAATTGCTGCAATTTACCATCAGTATGTGCTCAGAGCTGGAGCTATTAAAGCTCTTGGATCTTTCAGGAGCAACGCTTGA 858 49.42 MGKDVEVAEQGEFQSKDYQDPPPAPLIDPEELTKWSLYRAAIAEFIATLLFLYVTVLTVIGYSHQSDPSVSTDPCNGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCAGAICGCGLVRAFQSAYYVRYNGGANMLSNGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKEKAWDDQWIFWVGPFIGAAIAAIYHQYVLRAGAIKALGSFRSNA 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39638513 39639566 - CePI673135_02g022240.1 Cec02g2224 197277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2224 285 FunFam Probable aquaporin PIP1-2 24 285 - -
Cec02g2224 285 Pfam Major intrinsic protein 31 266 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec02g2224 285 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec02g2224 285 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec02g2224 285 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec02g2224 285 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec02g2224 285 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec02g2224 285 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec02g2224 285 NCBIfam MIP family channel protein 43 265 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec02g2224 285 CDD MIP 39 269 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec02g2224 285 Gene3D Glycerol uptake facilitator protein. 24 285 IPR023271 -
Cec02g2224 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 2 283 IPR034294 GO:0005886(PANTHER)|GO:0015250(PANTHER)
Cec02g2224 285 SUPERFAMILY Aquaporin-like 30 271 IPR023271 -
Cec02g2224 285 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Cec02g2224 285 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1263 Cec-Chr2:29263697 Cec02g2224 Cec-Chr2:39638513 2.20E-105 dispersed
Cec02g2224 Cec-Chr2:39638513 Cec04g1040 Cec-Chr4:29954846 5.80E-135 dispersed
Cec01g0253 Cec-Chr1:2518083 Cec02g2224 Cec-Chr2:39638513 6.90E-112 transposed
Cec10g2040 Cec-Chr10:35154497 Cec02g2224 Cec-Chr2:39638513 1.40E-120 wgd
Cec02g2224 Cec-Chr2:39638513 Cec04g1036 Cec-Chr4:29927490 7.70E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2224 K09872 - csv:101215300 547.74