Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2227 ATGGCCATGGCTATAGCTCATCATAGAGAGAGCAGTAGTGGGAGTATAACCAGGCATCTTGATAGTTCTGGGAAGTACGTTCGATACACTGCAGAGCAGGTGGAGGCTCTTGAGCGAGTCTATGCTGAGTGCCCCAAGCCAAGTTCTCTTCGACGCCAGCAGCTTGTTCGGGAGTGCCCAATTCTTTCCAACATAGAACCCAAGCAGATCAAAGTTTGGTTTCAGAATCGCAGATGTAGGGAGAAGCAAAGGAAGGAGGCTTCTCGGCTGCAAACAGTGAACAGAAAATTGAATGCTATGAACAAGCTGTTAATGGAGGAGAATGATCGACTGCAGAAGCAAGTGTCGCAATTGGTGTGTGAAAATGGGTTTATGAGGCAGCAATTGCAAACAGTGCCAGCAGCAGCAACTACTGATGCAAGCTGTGATTCTGTGGTCACCACTCCTCAACCCTCTCGACGTGATGCTAATAACCCAGCTGGACTCCTCTCCATTGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCTGTTGGGATCTTTGCCATTTCACAAAGTTGTGGTGGAGTGGCAGCAAGAGCCTGTGGTCTTGTAAGTTTGGAGCCTTCGAAGATTGCAGAGATCCTTAAAGATCGTCCATCGTGGTTTCGTGATTGTCGAAGCCTTGAGGTTTTTACCATGTTTCCAGCTGGAAATGGTGGGACAATTGAACTTGTTTACACACAGGTATATGCTCCAACTACCCTTGCTCCTGCACGTGATTTTTGGACGCTAAGATATACGATAACCTTAGAAAACGGCAGCCTTGTGGTTTGTGAGAGATCGCTCTCTGGTTCTGGTGCCGGTCCTAGTGCAGCTGCTGCTGCTCAGTTTGTGAGAGCTGAGATGCTCCCAAGTGGATATCTGATTCGACCATGTGATGGTGGTGGGTCCATTATACATATTGTTGATCACCTAAATCTTGAGGCATGGAATGTTCCTGAGGTGTTGCGACCACTTTATGAATCATCAAAAGTAGTGGCTCAGAAGATGACAATAGCAGCACTGCGGTACGTTAGGCAAATAGCCCAGGAGACAAGTGGTGAAGTGGTTTATGGTCTTGGCCGGCAACCTGCTGTTTTGCGGACCTTTAGCCAAAGATTGAGCAGGGGTTTTAATGATGCAGTGAATGGATTTAATGACAATGGATGGTCGTTGATTAATTGTGAAGGTGCTGAGGATGTGGTACTCACTGTGAATTCTACGAAAAATTTTGGCACAACATCGAACCCTGCTAACTCCTTGACATATCCTGGGGGAGTTCTTTGTGCAAAGGCATCCATGCTACTCCAAAATGTTCCTCCTGCTGTGTTAGTTCGTTTCTTGAGAGAACACCGCTCAGAGTGGGCTGATTTCAACATTGATGCATACTCTGCAGCAACCCTTAAGGCCAATTCATATGCATATCCAGGGATGAGACCCACAAGGTTTACTGGTAGCCAAATCATCATGCCACTCGGTCACACAATCGAGCACGAAGAGTTGCTTGAAGTAATTAGACTTGAAGGACATCCTATGGTACAAGAAGATGCTTTTGTTTCGAGAGACATTCATCTTCTTCAGATATGTAGTGGAATTGACGAGAATGCTGTAGGGGCCTGTTCAGAACTCATTTTTGCTCCTATTGATGAGATGTTTCCAGACGATGCTCCATTGCTGCCTTCTGGCTTTCGAATCATCCCATTGGATTCCAGAACAAGTGATGCAAAAGGTAGTCAACGGACTCTGGATCTAACATCGAGTCTTGAAGTGGGTTCTGGAACAAGCAATACTGCTGGAGATGCATCATCAAGTCAGAGTGCTAGATCGGTGTTAACCATAGCATTTCAGTTTCCTTTTGAAAGCAGCATGCAGGATAATGTTGCGAACATGGCACACCAGTACGTACGTAGCGTCATTTCCTCAGTGCAGAGAGTTGCGATGGCCATATCTCCATCTGGAGGCAGTCCAGCGCTAGGTCCAAAGCTGTCTCCTGGTTCTCCAGAAGCTCTTACTCTAGCACATTGGATATGCAAGAGCTATAGTTTACAATTGGGAACGGAGTTGATCAAATCAGATTCCTTGGAAAGTGATTCCCTTTTGAGAAATCTCTGGAATCATCAGGATGCAATATTGTGCTGTTCGCTGAAGCAGTCACTGCCTGTTTTTCTGTTTGCAAACCAAGCTGGGCTTGACATGTTGGAGACAACTCTAGTGGCCTTACAAGACATCACGTTGGATAAGATATTTGATGAGTCGGGTCGCAAAGCCTTGTGTGCTGATTTCCCAAAGTTAATGCAGCAGGGATTCGCATACTTGCCGGGAGGAATCTGTGCATCAACAATGGGACGACACGTTTCATACGAACAAGCCGTTGCATGGAAACCTTCTTCAATGGCTGCCCTCGTCCTCATCCATTGGAGCAGGAGCAGGAGGAATGAAGATGAAGATAAAGATGTTTGTTCTTCAATGTCTAATGCAATGCCTCCTCCAAAGTAA 2574 46.43 MAMAIAHHRESSSGSITRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLVRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSQLVCENGFMRQQLQTVPAAATTDASCDSVVTTPQPSRRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPSKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYTQVYAPTTLAPARDFWTLRYTITLENGSLVVCERSLSGSGAGPSAAAAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEAWNVPEVLRPLYESSKVVAQKMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDNGWSLINCEGAEDVVLTVNSTKNFGTTSNPANSLTYPGGVLCAKASMLLQNVPPAVLVRFLREHRSEWADFNIDAYSAATLKANSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHPMVQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLLPSGFRIIPLDSRTSDAKGSQRTLDLTSSLEVGSGTSNTAGDASSSQSARSVLTIAFQFPFESSMQDNVANMAHQYVRSVISSVQRVAMAISPSGGSPALGPKLSPGSPEALTLAHWICKSYSLQLGTELIKSDSLESDSLLRNLWNHQDAILCCSLKQSLPVFLFANQAGLDMLETTLVALQDITLDKIFDESGRKALCADFPKLMQQGFAYLPGGICASTMGRHVSYEQAVAWKPSSMAALVLIHWSRSRRNEDEDKDVCSSMSNAMPPPK 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39687609 39693334 + CePI673135_02g022270.1 Cec02g2227 197280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2227 857 Pfam MEKHLA domain 697 820 IPR013978 -
Cec02g2227 857 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677(InterPro)
Cec02g2227 857 Coils Coil 80 121 - -
Cec02g2227 857 CDD homeodomain 25 85 IPR001356 GO:0003677(InterPro)
Cec02g2227 857 SUPERFAMILY Homeodomain-like 22 87 IPR009057 -
Cec02g2227 857 FunFam Homeobox-leucine zipper protein REVOLUTA 25 80 - -
Cec02g2227 857 Pfam Homeodomain 25 83 IPR001356 GO:0003677(InterPro)
Cec02g2227 857 ProSiteProfiles START domain profile. 155 383 IPR002913 GO:0008289(InterPro)
Cec02g2227 857 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 19 821 IPR044830 GO:0003700(InterPro)
Cec02g2227 857 Gene3D - 201 379 IPR023393 -
Cec02g2227 857 CDD bZIP 77 116 - -
Cec02g2227 857 CDD START_ArGLABRA2_like 159 375 - -
Cec02g2227 857 SUPERFAMILY Bet v1-like 164 376 - -
Cec02g2227 857 Gene3D - 19 91 - -
Cec02g2227 857 SMART START_1 164 374 IPR002913 GO:0008289(InterPro)
Cec02g2227 857 MobiDBLite consensus disorder prediction 599 629 - -
Cec02g2227 857 SMART HOX_1 22 88 IPR001356 GO:0003677(InterPro)
Cec02g2227 857 Pfam START domain 165 373 IPR002913 GO:0008289(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1404 Cec-Chr1:28476426 Cec02g2227 Cec-Chr2:39687609 0.00E+00 dispersed
Cec02g2227 Cec-Chr2:39687609 Cec03g0788 Cec-Chr3:8987006 0.00E+00 dispersed
Cec02g2227 Cec-Chr2:39687609 Cec04g2220 Cec-Chr4:39972495 0.00E+00 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29130 PF01852 START 8.10E-46 CL0209 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2227 K09338 - csv:101215773 1598.18