Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2236 ATGCGCTTCAACCAAACTCCCTTTGTCAAGAAATCGTGTCGTCTTCTTCATCACTTCTCGCTTTGTTTCTCTAACAGCTTCTACTTGGTGGGTACTGGGTATTATGGTTACCACAGGACAAGTAACATTCTCGAGCCGCGCAATCTGAGACACACTATTATTTTACTGGTCCCTTTCGGATTCGCAAATGGGTCACTTTCAGAGTGGTGGTCGATGGGCTCTGTTCTGTTCTGTTTTCAGCCTGATTCCAATTCTGAATATATCCGAACCTTTAGCGGTCTCTGTCCACCACAATTCCCTTTTTGTCATTCGGCGTTCTCAATCCACTGTTTTGATTATCTGGATAAAATGAAGCACCAAGTGGCAACCACCTTCATTTCTTTAATGATTTTTATCTTGATGCAACAAGTCATTTGTGCTGATACTTCTACCCCTGGCAACTGGACGTGTAAATGTTTTTCTCCATACCAAGAAAATCAGAGATTAACACTTGGGGTAAATTGTTCTACATCGTGTTCATGTTCACAAGATGTTGGGGGAATCGGACTGTGGACATGCATCTGTTCAACTGATGGCTTACCAAAAGTTGTAGCCGAACACCGCGATTCTAACTGTTTTACGTCATGCAACTGCTCTTATGGACTGCTTCCGGAGTCACCATCTTCTAAAAGGCACATTTCAAGCAACGTGGTTGTGATTATTCTCTCACTATGTGTAATAATCATAACATTAGCCTTCTTCATCTTAGTGGTTTGCTATCTTTGTCAAAGGGGCAAGTACCGTGTTCGAACTCCAATATTTTCATTAGATAAGCAAATGAGCTACAACAGTTTGACCAACCTAATTAGTCACAAGAGTTCTTCAACACTGGATAGTAAGGTTATGATGGATTCCCCTGTGAATAACATCAAAGGATGCTTTTTCATGAATCAATGCTTGTTGAGGACTAAATCTTGGAGTATGTGTGGGATCATCATCCAATTCTCATATTCAGAGTTGGAAAATGCAACAAATAAGTTTTCAAGCTCCCATCTTGTGGGACGTGGGGGAAGTAGCTTTGTTTATCGTGGTGAATTGAAGGACGGTAGAACAGTGGCTGTAAAGCGGCTCAATATTCAAGGAGGACCGGATGTGGACTACTTATTCTTAACAGAAATACAATTGTTATCAAGACTTCATCATTGCCACGTGGTTCCTCTACTTGGTTATTGCACAGAATCAAGGGGGAAACATACTGAAAGGCTTTTGGTATATGAATACATGCCAAAGGGTAATCTAAGAGACTGTTTGGATGAAGCTTCAGAGGAGAAAATGGATTGGGGTACTCGTGTTACAATTGCTTTGGGAGCTGCAAGAGGCTTGGAGTATCTTCATGAAGCAGCTGCTCCCAGAATTTTGCATAGAGATGTCAAGTCAACAAATATTCTTTTGGATAAAGATTGGAGAGCAAAAATAACAGACCTTGGTATGGCTACAAGGTTAAGAGGTGATGATCTTCCTAGCTGTTCCAGTTCTCCTGCTAGAATGCAGGGGACTTTTGGGTACTTTGCACCGGAGTATGCAATTGTTGGAAGAGCCTCTTTGAAGTCTGATGTCTTTAGTTTTGGAGTTGTTCTTCTTGAGCTTATAACGGGTCAGCATCCCATCCATAAATCAGCAAGCAAAGGGGAGGAAAGCCTTGCAATATGGGCTGCTCCCCGGTTGCAAAATAGTAGGCTAGTCATAACAGAGTTGCCCGACCCAAATTTAGATGGAATGTTCCCGGAGGAAGAGATGCAAATAATGGCTTATTTAGCAAAGGAGTGCTTGCTGTTGGATCCTGATGCTAGACCTACCATGACTGAAGTTGTTCAAGTTCTTTCAAATATAACTCCAGATAAATCAAGAAGGAATAACATTTCTGCAAATGTTTTTCAGGAGAGGCTGTCAGCCTGTAGTGTGGAGAGTGAACCAGACATGGTAAATGACAACATGAATCCTATAGGGAAACAAGTCCATACAGAGGTGATTCCCATCGATGATGTGATGGCAAGGCAAGCTTCATCCCGCAAATGGCTCGATCGCTATTCACTACCATTGGATATTGATCGTTCACTTTGTGCTGGCAACTATGACAACCAAGATATTGTTTCTATTGAGCACATGGAAAGACTTGTACCCTTGGCTTTAAAGGGCCGCAATCTCCAAGTCCAAGCCCCAGATGATGAAACAGTAGACTTGACTGAGCCTCGGTTCGAGTCATTCTGCATCGTGAATGTCAGATCATCTTCATAG 2274 42.17 MRFNQTPFVKKSCRLLHHFSLCFSNSFYLVGTGYYGYHRTSNILEPRNLRHTIILLVPFGFANGSLSEWWSMGSVLFCFQPDSNSEYIRTFSGLCPPQFPFCHSAFSIHCFDYLDKMKHQVATTFISLMIFILMQQVICADTSTPGNWTCKCFSPYQENQRLTLGVNCSTSCSCSQDVGGIGLWTCICSTDGLPKVVAEHRDSNCFTSCNCSYGLLPESPSSKRHISSNVVVIILSLCVIIITLAFFILVVCYLCQRGKYRVRTPIFSLDKQMSYNSLTNLISHKSSSTLDSKVMMDSPVNNIKGCFFMNQCLLRTKSWSMCGIIIQFSYSELENATNKFSSSHLVGRGGSSFVYRGELKDGRTVAVKRLNIQGGPDVDYLFLTEIQLLSRLHHCHVVPLLGYCTESRGKHTERLLVYEYMPKGNLRDCLDEASEEKMDWGTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKDWRAKITDLGMATRLRGDDLPSCSSSPARMQGTFGYFAPEYAIVGRASLKSDVFSFGVVLLELITGQHPIHKSASKGEESLAIWAAPRLQNSRLVITELPDPNLDGMFPEEEMQIMAYLAKECLLLDPDARPTMTEVVQVLSNITPDKSRRNNISANVFQERLSACSVESEPDMVNDNMNPIGKQVHTEVIPIDDVMARQASSRKWLDRYSLPLDIDRSLCAGNYDNQDIVSIEHMERLVPLALKGRNLQVQAPDDETVDLTEPRFESFCIVNVRSSS 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39793312 39800614 - CePI673135_02g022360.1 Cec02g2236 197289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2236 757 SUPERFAMILY Protein kinase-like (PK-like) 320 620 IPR011009 -
Cec02g2236 757 PANTHER OS01G0750732 PROTEIN 207 635 IPR050885 -
Cec02g2236 757 SMART serkin_6 340 620 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2236 757 Gene3D Phosphorylase Kinase; domain 1 315 420 - -
Cec02g2236 757 Gene3D Transferase(Phosphotransferase) domain 1 421 646 - -
Cec02g2236 757 CDD STKc_IRAK 346 623 - -
Cec02g2236 757 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524(InterPro)
Cec02g2236 757 ProSiteProfiles Protein kinase domain profile. 340 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2236 757 Pfam Protein kinase domain 342 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2236 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g2236 757 FunFam receptor-like serine/threonine-protein kinase NCRK 315 420 - -
Cec02g2236 757 FunFam receptor-like serine/threonine-protein kinase NCRK 421 632 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2236 Cec-Chr2:39793312 Cec03g1616 Cec-Chr3:34311457 4.00E-66 dispersed
Cec02g2236 Cec-Chr2:39793312 Cec02g2242 Cec-Chr2:39860982 3.50E-19 proximal
Cec02g2236 Cec-Chr2:39793312 Cec03g0211 Cec-Chr3:2232119 2.40E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71780 PF00069 Pkinase 3.00E-43 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2236 - - - 0.0