Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2238 ATGAAACCCAACACTTGCAATACCAATGGCCACGTCTCCGCCGTGGATGGTCTCTGCTTGAACGATCCATTGTACTGGGGCACCGCCGCCGAGGGGCTCAAGGGAAGCCACCTCGAAGAGGTGAAGAAAATGGTGGGGGAGTACCGGCGAGGGGTGGTGCGGCTCGGGGGAGAGAGCTTGACGATTGGGCAGGTGGCGGCGGTGGCGTTGCACGACGGCGGAGTCAAGGTGGAACTGAATGAGGCGGCGAGAGAGGGAGTGAAGGCGAGTAGTGATTGGGTAATGGACAGTATGAACAAAGGGACGGATAGTTATGGAGTCACCACTGGATTTGGTGCGACCTCCCATAGGAGAACCAATCAAGGAGCTGCTTTGCAGAAGGAGCTTATTCGGTTCTTGAACGCTGGAATATTTGGAAATGGAACAGAGTCTAATCACACGCTGCCTCACACCGCCACAAGAGCAGCCATGTTGGTTAGAATCAACACTCTTCTCCAAGGTTACTCCGGCATTAGATTTGAGATTTTGGAGTCAATTACGAAGCTTCTTAATCACAATGTCACACCTTGCCTTCCCTTACGAGGCACCATTACGGCTTCTGGTGATTTGGTTCCCTTTTCCTATATTGCTAGCTTTTTGACTGGTCGTCCCAATGCCAAGGCTGTCGGCCCAACTGGCAATCTCCTCGATGCTGGAGCAGCTTTTAAACTCGCTGGCATTGATGGTGGATTCTTCGAACTACAACCTAAAGAGGGTCTTGCACTTGTCAATGGGACGGGTGTTGGATCTGGTTTGGCATCTATTGTTTTGTTTGAAGCCAATATATTGGCTCTTTTGTCTGAGGTCATTTCAGCAATTTTTGCTGAAGTAATGCAAGGAAAACCTGAGTTTACTGATCACTTGACTCATAAATTGAAACATCATCCGGGTCAAATTGAGGCAGCAGCCATAATGGAGCATCTTTTGGATGGAAGTGCTTTCATAAAAGATGCTAAGAAGTTACATGAGTTGGATCCTCTTCAAAAGCCGAAACAAGACCGTTATGCTCTTCGGACTTCACCTCAATGGCTAGGCCCTCAAATTGAAGTGATTCGGCATTCGACGAAATCAATTGAGAGAGAGATCAACTCGGTGAATGACAATCCATTGATTGATGTTTCGAGGAATAAAGCTCTACATGGAGGGAATTTTCAAGGAACTCCAATTGGGGTGTCCATGGATAATACTAGATTGGCGCTTGCCTCCATTGGAAAGCTTTTGTTTGCTCAATTCTCTGAACTTGTGAATGATTTCTATAACAATGGATTGCCTTCAAACCTCTCAGGAGGAAGTAATCCAAGCTTGGATTATGGATTTAAAGGGGCTGAAATTGCCATGGCTTCTTATTGTTCAGAACTACAATACCTGGCGAACCCGGTCACCAATCACGTTCAAAGCGCTGAGCAACACAACCAAGATGTGAACTCATTGGGTTTAATCTCTTCCCGAAAAACAGCCGAGGCAATAGATATCTTGAAGCTGATGAGCACAACTTTCCTAGTTGCTCTCTGCCAAGCCATAGATTTGAGACACATAGAGGAGAATCTGAGGAGCACTGTGAAGAACACAGTGAGTCAAGTGGCCAAGAAGGTTTTAACTATTGGAGTTAATGGGGAGCTTCATCCTTCAAGATTCTGTGAGAAAGATTTGCTGAAAGTCATTGATAGAGAATATGTTTTTGCTTACATTGACGATCCTTGCAGCATGACATATCCTTTAATGCAGAAGCTAAGGCAAGTTCTTGTGGAACATGCATTGAACAACAATGACGATTTGAAGAATTCAAACTCCTCAATCTTTCTAAAGATTGGAGCTTTTGAAGAGGAACTAAAAACCCTTTTGCCCAAAGAAGTAGAAAATGGAAGACAAGCCATTGCAAAAGGCAAACCAACAATTCCCAACAAGATCAAGGATTGCAGATCATACCCACTTTACAGATTTGTTAGAGAAGAATTGGGAACTGCTATCTTGACAGGTGAAAAAGTGAAATCTCCTGGTGAAGAATTTGACAAAGTTTTTAGTGCACTTTGTGAGGGGAAAATCATTGATCCTTTGCTTGAATGTCTTGAGAGTTGGAATGGGACTCCTCTTCCTATAAATTAA 2142 44.63 MKPNTCNTNGHVSAVDGLCLNDPLYWGTAAEGLKGSHLEEVKKMVGEYRRGVVRLGGESLTIGQVAAVALHDGGVKVELNEAAREGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTNQGAALQKELIRFLNAGIFGNGTESNHTLPHTATRAAMLVRINTLLQGYSGIRFEILESITKLLNHNVTPCLPLRGTITASGDLVPFSYIASFLTGRPNAKAVGPTGNLLDAGAAFKLAGIDGGFFELQPKEGLALVNGTGVGSGLASIVLFEANILALLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHLLDGSAFIKDAKKLHELDPLQKPKQDRYALRTSPQWLGPQIEVIRHSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSGGSNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSTTFLVALCQAIDLRHIEENLRSTVKNTVSQVAKKVLTIGVNGELHPSRFCEKDLLKVIDREYVFAYIDDPCSMTYPLMQKLRQVLVEHALNNNDDLKNSNSSIFLKIGAFEEELKTLLPKEVENGRQAIAKGKPTIPNKIKDCRSYPLYRFVREELGTAILTGEKVKSPGEEFDKVFSALCEGKIIDPLLECLESWNGTPLPIN 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39830901 39835111 + CePI673135_02g022380.1 Cec02g2238 197291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2238 713 CDD PAL-HAL 58 523 IPR001106 -
Cec02g2238 713 NCBIfam phenylalanine ammonia-lyase 22 703 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Cec02g2238 713 Gene3D - 526 647 IPR023144 -
Cec02g2238 713 FunFam Phenylalanine ammonia-lyase 14 259 - -
Cec02g2238 713 FunFam Phenylalanine ammonia-lyase 260 558 - -
Cec02g2238 713 FunFam Phenylalanine ammonia-lyase 526 647 - -
Cec02g2238 713 PANTHER HISTIDINE AMMONIA-LYASE 18 712 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Cec02g2238 713 SUPERFAMILY L-aspartase-like 22 712 IPR008948 GO:0003824(InterPro)
Cec02g2238 713 Gene3D - 14 259 IPR024083 -
Cec02g2238 713 Gene3D Fumarase/aspartase (Central domain) 261 707 - -
Cec02g2238 713 Pfam Aromatic amino acid lyase 60 536 IPR001106 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2238 Cec-Chr2:39830901 Cec04g1052 Cec-Chr4:30091772 0.00E+00 dispersed
Cec02g2238 Cec-Chr2:39830901 Cec04g1051 Cec-Chr4:30082408 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2238 K10775 - csv:101218156 1353.96