Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2311 ATGACTACATTAGCCAGTACTTCTGAGATTGTTGAATCAACAGAAGAATTTGATTCTGAGAAAGCTGGGACGAGTTACGCGCTAGATGTAGGAAAAAGGTTTTCTATAGAGGATGACATTAATCGTCTGTTTCAAGCAATTGATATCAGAACCTTACGTAAGAGGTCAAGTCAGCAACGTGAAGTTGATAAAGATGCTCTGCGGAAAAGTGCGATGAAAAGACCAGTTAGAGTAGGTTCATCTCACATGGCAGGGATTGGAATTTCTGAACCTGCAAGTTTAAAGCAGGCGTTGAGGGGCTTATGCATATCCCAGGCTGCAGAAATGGCTGCTTCAAAGAGGTTAACAAGGTCTGTAGGTTCACCCAGAATCTCTGAAGCAGGAACTATCAAAAGATTGTATAGGGCGGTGGTGGTTGAGGCCAGTGGATCTGGTGTGCCTGTAAATGAAAGCAAAGCAAATTTGGTAGAAATTTCCATCGTTTCAGAAAGAATTATGTCAACTTTTCAAAATAAGATGCCTGAATTGTCGCATAAAACTGAGGCTGATATACCAAACCAAGGAGCTGAGTCTTCTTCTTCCAAGGATACTGGGGTATCAGAAAAGGCGGGTGTGGATAGATTGATGTCAAAGGATCTTGTTGTTAATACGGCTACTGAGGTGACAAGTATAAAGCCACCTGGTGAGGTGGGAAAACTTAAATCTCCTTCCCTTACTCCTTCTGGTGAGAAGGATCCGGCTGTGAACGGTATGGCTATTTCCCCAACTGAAGATTTGACAAAAAATTCAGTGCCAGAGAAGGAGAGAGGTACAATGGATTGTTTATCTTCTCTATCAAGCTCTGGATCTGTTGTCAGGCCGAACAAATCAGCTTTCAATAATACACGCTTCATCAAACCTATTTTCAGGACCAAGAATTTTGTCAAGAAGAAAGCAAAACTTGAACCAAATTCCTCCCCTAGTATGTCCGATGTCTGCACAGTAACGTTTGACACTGATTTGGCTACCATAGCAGAAAAGTCTGAGAACCAGATGCCAGATAACGCACAGCTTCATGAGATTAAAGAAGAAGATAAATGTTCTTCTGTCTCTAGTAACATAACTTTAGGTGTTGAAGTAAGTGGAAATGTAGGAAACACAGAATCTAGTAGACCTGGTACGTCTCTCAGCTGCTGTAACAGGAACAGACCAACTATTATGCTATCTGATGAGAGATCCAGATCAAGAGAGAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTGTTGGTGAATGTAGCAGTAGCCCAAGCATTAGTGGGGAAAGCATTCTCAGTGGATCAAGTCGCAGTGGTGTTCGGCCTCACATGTCAAAAGACTTGAAATGGGAGGCTATCCACCACCTCAAGGATCAACATAAATGCCTAGGTCTGAGAAACTTCAAGCTGCTAAAGAGACTTGGTCTCGGGGACATTGGGACTGTCTATCTCTCTGAGCTTTGCAATTCAAGCTGTCTTTTTGCTATGAAAGTGATGGACAAGGAGTTCTTGGCAAGTAGGAAAAAAATAATTCGGGCACAAACTGAGAGAGAGATACTACAAATGCTTGACCATCCATTTCTCCCTACATTATATGCCCATTTCGAGACGGATAAGCACTCATGCCTGGTCATGGACTACTGTCCCGGTGGAGATCTCCACGTACTGCGACAGAAGCAACCATGCAAGAGTTTCTCTGAGCGTGCAGTCAGGTTCTATGTCGCTGAAGTTCTTCTTGCACTGGAGTACTTGCACATGCTAGGAGTTGTTTATCGCGACCTGAAACCCGAAAACGTCCTGGTCCGAGAAGATGGGCACATCATGCTCACGGATTTTGATTTGTCCCTTAGATGTGCTGTTAACCCAACGCTGCTTCAATCATCATCTCCAGTTGTGGAACCCACTAAGAGGACGTTGAATCCCTGTGATGAATCTAGTTGCATTGACCCTTTCTGCCTCCATCCATCCTGGCAGGTCTCATGCTTCACTCCCAAAGTTCTATCTTCTCCATACAAATCCCGGAGAACGAAAACAGATCATCAGGCTAGTCTATTACCACAGCTTATAGTCGAACCAACTGGTGCACGGTCCAATTCGTTTGTAGGAACCCATGAATACCTCGCTCCTGAGATTGTCAAGGGCGACGGCCATGGGAGCGCTGTTGATTGGTGGACTTATGGGATTTTCCTGTTTGAGCTACTATATGGTAAGACTCCCTTCAAAGGTTCAGGAAATGAGGACACATTAGCGAACATAGTATCCCAAACTCTCAAGTTCCCCGATTGCCCCATAGTTAGTTTTCATGCAAGAGACCTGATCAGATGTCTGCTGACAAAGGAGCCCGAGAACCGATTAGGCTCGACAAAAGGAGCTATCGAGATTAAGCAGCATCCGTTTTTCGAAGGCCTCAATTGGGCTCTAATACGTTGTGCAACACCACCCGAGCTTCCCAAGTTTTTCGATGGTGGAACTAGTGCAATGCCAGTGGATTCTGGGGAGAATACAAAGCGTAGAGATCTCGAAAATATGGAAGCGGATGCAGCAATGTTTGACCTGTTTTAG 2577 44.32 MTTLASTSEIVESTEEFDSEKAGTSYALDVGKRFSIEDDINRLFQAIDIRTLRKRSSQQREVDKDALRKSAMKRPVRVGSSHMAGIGISEPASLKQALRGLCISQAAEMAASKRLTRSVGSPRISEAGTIKRLYRAVVVEASGSGVPVNESKANLVEISIVSERIMSTFQNKMPELSHKTEADIPNQGAESSSSKDTGVSEKAGVDRLMSKDLVVNTATEVTSIKPPGEVGKLKSPSLTPSGEKDPAVNGMAISPTEDLTKNSVPEKERGTMDCLSSLSSSGSVVRPNKSAFNNTRFIKPIFRTKNFVKKKAKLEPNSSPSMSDVCTVTFDTDLATIAEKSENQMPDNAQLHEIKEEDKCSSVSSNITLGVEVSGNVGNTESSRPGTSLSCCNRNRPTIMLSDERSRSREKGMFSQSSKSSVGECSSSPSISGESILSGSSRSGVRPHMSKDLKWEAIHHLKDQHKCLGLRNFKLLKRLGLGDIGTVYLSELCNSSCLFAMKVMDKEFLASRKKIIRAQTEREILQMLDHPFLPTLYAHFETDKHSCLVMDYCPGGDLHVLRQKQPCKSFSERAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLTDFDLSLRCAVNPTLLQSSSPVVEPTKRTLNPCDESSCIDPFCLHPSWQVSCFTPKVLSSPYKSRRTKTDHQASLLPQLIVEPTGARSNSFVGTHEYLAPEIVKGDGHGSAVDWWTYGIFLFELLYGKTPFKGSGNEDTLANIVSQTLKFPDCPIVSFHARDLIRCLLTKEPENRLGSTKGAIEIKQHPFFEGLNWALIRCATPPELPKFFDGGTSAMPVDSGENTKRRDLENMEADAAMFDLF 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40428850 40431889 - CePI673135_02g023110.1 Cec02g2311 197364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2311 858 PANTHER FLIPPASE KINASE 1-RELATED 338 829 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec02g2311 858 MobiDBLite consensus disorder prediction 413 445 - -
Cec02g2311 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g2311 858 ProSiteProfiles Protein kinase domain profile. 473 805 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2311 858 MobiDBLite consensus disorder prediction 179 204 - -
Cec02g2311 858 Pfam Protein kinase domain 474 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2311 858 Pfam Protein kinase domain 702 805 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2311 858 MobiDBLite consensus disorder prediction 404 446 - -
Cec02g2311 858 CDD STKc_phototropin_like 473 823 - -
Cec02g2311 858 FunFam Serine/threonine-protein kinase D6PK-like 471 556 - -
Cec02g2311 858 Gene3D Transferase(Phosphotransferase) domain 1 700 822 - -
Cec02g2311 858 Gene3D Transferase(Phosphotransferase) domain 1 553 621 - -
Cec02g2311 858 SUPERFAMILY Protein kinase-like (PK-like) 448 824 IPR011009 -
Cec02g2311 858 FunFam serine/threonine-protein kinase D6PK-like 557 624 - -
Cec02g2311 858 MobiDBLite consensus disorder prediction 226 268 - -
Cec02g2311 858 FunFam serine/threonine-protein kinase D6PK-like 700 823 - -
Cec02g2311 858 Gene3D Phosphorylase Kinase; domain 1 471 552 - -
Cec02g2311 858 SMART serkin_6 473 805 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2311 858 MobiDBLite consensus disorder prediction 1 22 - -
Cec02g2311 858 MobiDBLite consensus disorder prediction 184 199 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2182 Cec-Chr2:39231636 Cec02g2311 Cec-Chr2:40428850 4.10E-98 dispersed
Cec02g2311 Cec-Chr2:40428850 Cec05g0014 Cec-Chr5:154017 7.30E-149 dispersed
Cec02g2311 Cec-Chr2:40428850 Cec02g2312 Cec-Chr2:40445581 1.80E-115 tandem
Cec03g0774 Cec-Chr3:8659096 Cec02g2311 Cec-Chr2:40428850 2.10E-102 transposed
Cec02g2311 Cec-Chr2:40428850 Cec04g1135 Cec-Chr4:30966628 1.80E-195 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71783 PF00069 Pkinase 1.50E-36 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2311 - - - 0.0