Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2312 ATGGAGTCATCTCCCGACGACATCGCCGACGACCTACAAAGCCTCAGCTTCAACTCTACCAACACCAACCGCAGCACAAGCTCCGGCTCCGAGACCACTCTCACCGCCTCCTCCTCCTCCTTTAACATCCCTTCCATTCTCAGCAAGCCCCACGCGCCTTCCTCCGACCCTTGCTGGTCCGCTGTTAACCGGATCCGATCCGAATCTTCGTCTCGTCAACTCGTCTTCTCCGACCTTAAGTTCTTCCACCGTCTTGGCTCTGGCGACATTGGCTCCGTCTACCTCTCCGGCCTCAAGTCCGCTGGAACCGACGGATGTTTGTTTGCAGCGAAGGTAATGGATAAGAAGGAACTAGCGAGTAGGAGTAAAGAAGGCAGAGCAAGGACTGAGAGAGAGATTTTGGAGTCTTTGGACCATCCGTTTCTACCGACGCTCTATGCTAGTATCGACTCGCCGAAGTGGCTCTGTCTCTTAACGGAGTTCTGTCCCGGCGGCGACCTCCACGTTCTCCGGCAACGGCAACCTAACAAACGCTTCGATGAACTCGCCGTGAGATTCTATGCATCGGAGATAGTGGTTGCTATCGAGTACCTTCACATGATGGGGATTGTTTACCGTGATCTGAAGCCGGAAAATGTACTGGTACGATCGGACGGCCATATCATGCTCACTGATTTTGATCTCTCCTTAAAGTGTGAGGATTCGACGGCGACCCCACAGGTTATCAATGCTAAATATCTGACAAGCGGCACCGCCCCGCTAAAGGACTACCAAATTGATGCCCCTCCTTTCACATCATCCTCCTGCATTCTTCCAAACTGTATAGTCCCGGCCGTGTCATGTTTCAACCCAAAACGCAAGCGCAAGAAGAAGTCTGGTCACCGTAACGGACCCGAGTTTGTCGCTGAACCGGTTGACGTCCGGTCAATGTCATTTGTTGGCACCCACGAGTACTTGGCCCCGGAGATCGTCTCTGGTGAGGGCCATGGAAGCGCGGTGGACTGGTGGACTCTGGGGGTATTTGTGTTTGAGTTGTTTTATGGAGTGACACCCTTTAGAGGCATGGACAATGAGCTCACCTTGGCCAACATAGTGGCTAGAGCTCTTGAGTTCCCTAAAGAACCAGCGGTGCCAACGGCAGCGAAGGACCTCATCTCTCAGTTATTGATCAAAGACCCGGCGAGACGGTTGGGATCGACGACAGGGTCGTCGGCAATCAAGCACCATTCATTTTTTCAAGGAGTAAATTGGGCATTATTGAGATGTACGTCGCCACCATTTATTCCTCCACCTTTTAGTAGAGAAAAAATTGCATCGGATGAAAGCTGCACAGAGGCTCCTGTGGAAAGCCGCCTCTTTCCTGTGCTTCCCATGGTACACTGTCATCCGTTCCCTGCCTTGGTGTCATCAGAGATGTACGGAAGGCATACAGCTGATCAAGTTGAGGGCTTGCCACGGCAAAGTAGCTGGCAATGGCTGATAGAAACACAACTGATTTTGAGCAGTTTTTTTCCGCCTCTCATTTTCATGTCTAGAAGCAAGCAAGAGTTGGCTATTTTGCTAAAAGCCTTCTCCACCCAAATTCTTAGCCAACTTCACAAACAGCAGACGTATCATCAAATTGAAATGAAGAGCAAAAAACAAGCTTGGACAGATCTGCATGCAGACTGA 1671 50.93 MESSPDDIADDLQSLSFNSTNTNRSTSSGSETTLTASSSSFNIPSILSKPHAPSSDPCWSAVNRIRSESSSRQLVFSDLKFFHRLGSGDIGSVYLSGLKSAGTDGCLFAAKVMDKKELASRSKEGRARTEREILESLDHPFLPTLYASIDSPKWLCLLTEFCPGGDLHVLRQRQPNKRFDELAVRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQVINAKYLTSGTAPLKDYQIDAPPFTSSSCILPNCIVPAVSCFNPKRKRKKKSGHRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPTAAKDLISQLLIKDPARRLGSTTGSSAIKHHSFFQGVNWALLRCTSPPFIPPPFSREKIASDESCTEAPVESRLFPVLPMVHCHPFPALVSSEMYGRHTADQVEGLPRQSSWQWLIETQLILSSFFPPLIFMSRSKQELAILLKAFSTQILSQLHKQQTYHQIEMKSKKQAWTDLHAD 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40445581 40450969 + CePI673135_02g023120.1 Cec02g2312 197365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2312 556 FunFam serine/threonine-protein kinase D6PK-like 307 430 - -
Cec02g2312 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g2312 556 MobiDBLite consensus disorder prediction 1 34 - -
Cec02g2312 556 Pfam Protein kinase domain 82 246 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2312 556 Pfam Protein kinase domain 309 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2312 556 FunFam serine/threonine-protein kinase D6PKL2 78 165 - -
Cec02g2312 556 SMART serkin_6 79 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2312 556 PANTHER FLIPPASE KINASE 1-RELATED 24 434 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec02g2312 556 FunFam serine/threonine-protein kinase D6PK-like 166 233 - -
Cec02g2312 556 Gene3D Transferase(Phosphotransferase) domain 1 166 237 - -
Cec02g2312 556 SUPERFAMILY Protein kinase-like (PK-like) 57 442 IPR011009 -
Cec02g2312 556 Gene3D Transferase(Phosphotransferase) domain 1 308 430 - -
Cec02g2312 556 ProSiteProfiles Protein kinase domain profile. 79 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2312 556 MobiDBLite consensus disorder prediction 9 34 - -
Cec02g2312 556 Gene3D Phosphorylase Kinase; domain 1 77 165 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2312 Cec-Chr2:40445581 Cec11g0977 Cec-Chr11:16173631 7.40E-118 dispersed
Cec02g2311 Cec-Chr2:40428850 Cec02g2312 Cec-Chr2:40445581 1.80E-115 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71784 PF00069 Pkinase 1.70E-34 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2312 K08286 - csv:101207262 867.07