Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2325 ATGGAAAAGCTCAAACAAAGATTATTTGTTGAAGTTATAATACAAATTCAGAACAACAACAACAACAACAATGGTTTAAAGAAGGTTTTTTTTTTTTTTTTAATGGGGAGCCAAAGAGTTGAAGAAACTGGTCCTTCATCCCACTATCATCATCACCTTCCATATAATTCACTTCTTTATGGAATCAACAACAATAATCTTTCCTCCACTTTGATCAATCACGATGGACAATCTTTTGATTTTGGAGAATTGGAACAAGCAATTGTGCTACAAGGACTCGGACCCAAGAACAAACTCGATCATCACGAACCTAAACAAAGCTTTTTCTCAGGCAAGCCTGCAGCAACTCTGGAAATGTTCCCTTCTTGGCCAATCAAACACCAACAAACTTCAAGAGGAATTAGTTTGAGAAGAAGAGAAGAGAGCAGTGATGAGTCAGGAGCAGCTGTGAACACTCATACAATAAACAAATCTAATAATCAAGGAGGGCATTTGGAATTGGAAATAGAAAAAGAAGAATCTGAGATGAGTAAAAAGGGTTGTTGTTCATCTTCTTCTTCAGGTCAAGATCAGAGCTTTATTCAAAAGCATCTACAGCAGATTCAACCTGAAATGATACTCAGTGATATTTCAACAACTGCACTTTCATCTCAACATCAATCCCTTCAACAAAAGAGAAAAGGATGTGGTTCCATTTCAACATCACAGAAACAACTTGACGCTAAGACATTGAGACGTTTAGCTCAGAACAGAGAGGCTGCGAGGAAGAGTCGACTAAGGAAAAAGGCTTACGTACAGCAACTCGAGAGCAGTAGAATCAAGCTTACGCAGCTTGAGCAGGACCTTCAACGGGCACGATCTCAGGGTTTGTTTTTAGGTGCCGGCGGTACTGGCGGCGGCATTGTCAGCCCCGCTAGTGCAATTTTCGATATGGAATATGTAAGGTGGTTGGAAGAGGACCATCGACATACAATGGAGCTGCGTGGGGGACTAGAGGCACATCTGCCTGACGTGGATTTGAGAGTGAGAGTAGATGCATGCATTTGCCATTACAATGAAATTTTTCGACTCAAAGGAGAGGTTGCTAAGTCCGACATCTTCCATCTCATCACCGGAATCTGGATGTCTCCGGCGGAGCGTTGTTTCCTCTGGATCGGTGGATTTCGACCCTCCGATCTCATCAAGATGTTAATGTCACAATTGGATCCAATAACAGAACAACAAGTGATGGAGATTTACAAGCTACAACATTCGTCACAACAAGCTGAAGATGCTTTATCTCAAGGACTTGATCAGCTCCATCGGTCTTTGACCGACATCGTCGCCGGCGGTCCGGTCATCGACGGCATCAACCACATGGTTTTGGCCATGGACAAGCTCTCTAGTCTCCAAGGCTTTCTCCATCAGGCAGATATTTTGAGACAACAAACGCTTCATCAACTACGTAGGATACTCACGGTTCGACAAGCGGCAAAATGTTTTCTAATCATTGGTGAATATTACAGTAGATTACGAGCTCTAAGCTCCCTATGGTCCTCTCGTCCAAAGGAGGGTGAAGATAATTCAAGCCAAACAAGTTTGCATCAACAAGTCCATATGGTTCAACCCTCGCACCTTCACTTCTCAAGCTTCTAA 1635 42.63 MEKLKQRLFVEVIIQIQNNNNNNNGLKKVFFFFLMGSQRVEETGPSSHYHHHLPYNSLLYGINNNNLSSTLINHDGQSFDFGELEQAIVLQGLGPKNKLDHHEPKQSFFSGKPAATLEMFPSWPIKHQQTSRGISLRRREESSDESGAAVNTHTINKSNNQGGHLELEIEKEESEMSKKGCCSSSSSGQDQSFIQKHLQQIQPEMILSDISTTALSSQHQSLQQKRKGCGSISTSQKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLQRARSQGLFLGAGGTGGGIVSPASAIFDMEYVRWLEEDHRHTMELRGGLEAHLPDVDLRVRVDACICHYNEIFRLKGEVAKSDIFHLITGIWMSPAERCFLWIGGFRPSDLIKMLMSQLDPITEQQVMEIYKLQHSSQQAEDALSQGLDQLHRSLTDIVAGGPVIDGINHMVLAMDKLSSLQGFLHQADILRQQTLHQLRRILTVRQAAKCFLIIGEYYSRLRALSSLWSSRPKEGEDNSSQTSLHQQVHMVQPSHLHFSSF 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40569015 40577018 + CePI673135_02g023250.1 Cec02g2325 197378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2325 544 Gene3D - 241 290 - -
Cec02g2325 544 MobiDBLite consensus disorder prediction 515 544 - -
Cec02g2325 544 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 240 284 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g2325 544 Coils Coil 261 288 - -
Cec02g2325 544 Pfam bZIP transcription factor 241 283 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g2325 544 ProSiteProfiles DOG1 domain profile. 306 514 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Cec02g2325 544 MobiDBLite consensus disorder prediction 128 163 - -
Cec02g2325 544 SUPERFAMILY Leucine zipper domain 242 285 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g2325 544 PANTHER TRANSCRIPTION FACTOR TGA9 187 517 - -
Cec02g2325 544 SMART brlzneu 238 315 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g2325 544 FunFam BZIP family transcription factor 241 290 - -
Cec02g2325 544 Pfam Seed dormancy control 325 399 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Cec02g2325 544 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 245 260 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g2325 544 MobiDBLite consensus disorder prediction 147 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1300 Cec-Chr1:23832100 Cec02g2325 Cec-Chr2:40569015 3.00E-144 dispersed
Cec02g2325 Cec-Chr2:40569015 Cec10g1751 Cec-Chr10:32194494 2.00E-91 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29138 PF14144 DOG1 3.60E-27 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2325 K14431 - csv:101223216 673.7