Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2332 ATGGCGGAAGAACATAGATGCCAAGCGCCGAAACTTTGCGTTAATAACTGTGGATTCTTCGGGAGTCCGGCGACTCAAGATCTCTGTTCAAAATGTTACCGAGATCTGCAGTTAAAGGAACAACAATCCTCCTCCGCTAAACTCGCCTTAAACCAAACCCTAACATCCGCCGCGTCATCGTCCTTCGCGGATGCGGCGTTGTTAAATCCGAAACCGGCTTCATCGGAAGCGAACCAACCTCTGGCGGAGACGAGGACGGAAGTGGTTCCAACGCCGGCGGCAACACAGCAGCAGCCGAGCCGATGTATGACGTGCAGGCGGCGCGTGGGGCTGACGGGGTTCAAGTGCAGGTGCGGGATGGTGTACTGTGGGACTCACCGGTACCCGGAGCATCACGGTTGCGAATTTGACTTCAAGCGGATGGGAAAGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAAGGGGAGAAACTGCAGAAGATCTGA 486 55.56 MAEEHRCQAPKLCVNNCGFFGSPATQDLCSKCYRDLQLKEQQSSSAKLALNQTLTSAASSSFADAALLNPKPASSEANQPLAETRTEVVPTPAATQQQPSRCMTCRRRVGLTGFKCRCGMVYCGTHRYPEHHGCEFDFKRMGKEQIAKANPVVKGEKLQKI 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40620329 40620814 - CePI673135_02g023320.1 Cec02g2332 197385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2332 161 SMART A20_3 10 34 IPR002653 GO:0003677(InterPro)|GO:0008270(InterPro)
Cec02g2332 161 Gene3D - 1 61 - -
Cec02g2332 161 ProSiteProfiles Zinc finger AN1-type profile. 96 142 IPR000058 GO:0008270(InterPro)
Cec02g2332 161 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677(InterPro)|GO:0008270(InterPro)
Cec02g2332 161 FunFam Zinc finger AN1-type containing 6 74 157 - -
Cec02g2332 161 PANTHER AN1-TYPE ZINC FINGER PROTEIN 8 161 IPR050652 -
Cec02g2332 161 Gene3D - 73 157 IPR035896 -
Cec02g2332 161 Pfam A20-like zinc finger 12 34 IPR002653 GO:0003677(InterPro)|GO:0008270(InterPro)
Cec02g2332 161 Pfam AN1-like Zinc finger 103 138 IPR000058 GO:0008270(InterPro)
Cec02g2332 161 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 56 - -
Cec02g2332 161 SMART AN1_Zf_4 102 139 IPR000058 GO:0008270(InterPro)
Cec02g2332 161 SUPERFAMILY AN1-like Zinc finger 88 156 IPR035896 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2332 Cec-Chr2:40620329 Cec04g1145 Cec-Chr4:31069033 2.80E-41 dispersed
Cec02g2332 Cec-Chr2:40620329 Cec01g0346 Cec-Chr1:3549116 1.10E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2332 - - - 0.0