Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2357 ATGGCGACGTACTTTCACGGTGGTTCAGAAATCCAAGCGAATTCTGACGGAATTCATACTCTTTACCTTATGAACCCAAATTACGTACCTTACTCTGACACCCACTCTCAAACGCCTCCCAATATGCTCTTTCTCAACTCTTCTTCAACTCACGCGCTTAACCCTTCAACTCTTCCTCACGCGCCGCCTTCCAACAACCACTTCGTCGGAATTCCCCTCCCGACCACCGACAATCCTCGTCCATCCTACCACGAAATCTCAACCCTCCATCCGATGCCACCTCACCGCCTCCACTACAATCTATGGGCTCCTATGGACCAACAACCCCATCACGGAATTTCCGGCGATTCCGCCGATTTGACCTTCCGCCGCCCCACCACACAACAAGGTTTGTCCTTAAGCCTCTCCTCCCAACAATCGCTTTACCGGACACTCTCGGCCGAGCAGGAGATTCAAGGCGGCGGCGGCGGTGCTCCAAGTGGAGAGGAAATTCGGGTGTCGGGAAATTCACCGACGTCGGTGTCGGTAGTGTCGAGTGGAATAACGGGCGTTCAAAGCGTGATATTGGGGTCTAAGTACTTGAAAGCGGCTCAAGAACTTTTGGATGAAGTGGTTCATGTTGGCAAAGGAAATTTTAAATCCGACAAAGGGGATGGGACAAAGGACAAGATGAAGATGAAGAAAGAATCAACGGCTACGATTGGTGGAGACCCTTCCGCCTCCGTCGGCGGTGGTGAAAGAACTTCCAAGCCTGTTGCTGAGCTCAGCACTGCTCAAAGACAGGACCTTCAGATGCAAAAAGCTAAGCTCATTGGCATGCTTGATGAGGTGGAGCAGAAGTACAGACAATATCATCAACAAATGCAAGGAGTGGTGTGTTGTTTTGAGCAGGCAGCAAGTTTGGGGTCAGCCAAATCTTACGCTTCACTCGCACTTGAAACAATTTCAAAGCAATTCCGGTGCTTAAAAGATGCAATTTGTGCACAAATAAAAGCGACAGGGAAAAGCTTAGGAGAAGAAGAAAATTGGTTGGGTTCAAAAATTGAAGGGTCTTCAAGATTGAGATACGTTGATCATCATTTAAGGCAGCAAAGAGCTTTGCAACAATTGGGAATGATTCAACACAATACTTGGAGACCACAAAGAGGTTTGCCTGAACGTGCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTTCATCCCTATCCCAAAGATTCAGACAAGATTATTCTCGCCAAACAAACCGGACTCACAAGGAGCCAAGTATCGAATTGGTTTATAAATGCAAGAGTTCGTCTATGGAAGCCAATGGTTGAAGAAATGTACTTGGAGGAAATCAAAGAGCAAGAACAAAACGGGGATTCCCAAGACATGATTAGAGGAGGAGATCATCATCATCATCATCATCAAAGCAATAACAACAATAATAATAGTAATAATGATCCACAATATTCCAAGACAGAAAATTTGATATACAACAACAACAACCCTTCCCATTCTTCAATCTCATCATCCTCAATGTTAGGAATAGGATCAACGACGGGCGGCTTCAACCTCGTACGACCGTCCTCCGACAATAACATTCTCTCAAGTCCCAAAAAACCAAGGACCACCACCAGTAACAGTACAGCCACAATCAACAACAACAACCTGCCCGAAACCCCATCCTCAAAATCCATGCTTTTAAGAGATAATATTGTTCATGATCATCATAGGGGTAGTTTTGGTAATTCCAATACATACCCGGTTGGTGAAATTGGCCCAACCTTCAATTCTGAGCTTTTAACACCAAGATTTCATGCAAATGGAGTCTCTCTCACTCTTGCCCTTCCCCATAATAGTAATTCAGATCATCTCTCTCTTTCAGCCAACCAACCAAATTACCATCACCTATCCTCCAACCCAAATCTTCACTTGGGCAGATCAAGGCTTGATATCACCAATAATCATCATCCCGGACCACCCAATTTCTCCGACGTCAATCCCGCTGCCCCCCCACCGCCTCATTCCGCTTACGACCACGTTGAAATGCAAACCACCAAAAGGTTCGCCGCCCAATTGTTGCCGGATTTTGTTGCCTGA 2088 46.12 MATYFHGGSEIQANSDGIHTLYLMNPNYVPYSDTHSQTPPNMLFLNSSSTHALNPSTLPHAPPSNNHFVGIPLPTTDNPRPSYHEISTLHPMPPHRLHYNLWAPMDQQPHHGISGDSADLTFRRPTTQQGLSLSLSSQQSLYRTLSAEQEIQGGGGGAPSGEEIRVSGNSPTSVSVVSSGITGVQSVILGSKYLKAAQELLDEVVHVGKGNFKSDKGDGTKDKMKMKKESTATIGGDPSASVGGGERTSKPVAELSTAQRQDLQMQKAKLIGMLDEVEQKYRQYHQQMQGVVCCFEQAASLGSAKSYASLALETISKQFRCLKDAICAQIKATGKSLGEEENWLGSKIEGSSRLRYVDHHLRQQRALQQLGMIQHNTWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKIILAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKEQEQNGDSQDMIRGGDHHHHHHQSNNNNNNSNNDPQYSKTENLIYNNNNPSHSSISSSSMLGIGSTTGGFNLVRPSSDNNILSSPKKPRTTTSNSTATINNNNLPETPSSKSMLLRDNIVHDHHRGSFGNSNTYPVGEIGPTFNSELLTPRFHANGVSLTLALPHNSNSDHLSLSANQPNYHHLSSNPNLHLGRSRLDITNNHHPGPPNFSDVNPAAPPPPHSAYDHVEMQTTKRFAAQLLPDFVA 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40804767 40808162 + CePI673135_02g023570.1 Cec02g2357 197410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2357 695 Gene3D - 381 459 - -
Cec02g2357 695 MobiDBLite consensus disorder prediction 149 173 - -
Cec02g2357 695 MobiDBLite consensus disorder prediction 450 472 - -
Cec02g2357 695 MobiDBLite consensus disorder prediction 474 559 - -
Cec02g2357 695 MobiDBLite consensus disorder prediction 647 668 - -
Cec02g2357 695 MobiDBLite consensus disorder prediction 209 230 - -
Cec02g2357 695 MobiDBLite consensus disorder prediction 209 260 - -
Cec02g2357 695 SUPERFAMILY Homeodomain-like 379 444 IPR009057 -
Cec02g2357 695 ProSiteProfiles 'Homeobox' domain profile. 375 438 IPR001356 GO:0003677(InterPro)
Cec02g2357 695 Pfam Associated with HOX 187 326 IPR006563 -
Cec02g2357 695 MobiDBLite consensus disorder prediction 450 559 - -
Cec02g2357 695 Coils Coil 260 287 - -
Cec02g2357 695 FunFam BEL1-like homeodomain protein 9 381 443 - -
Cec02g2357 695 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 138 480 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Cec02g2357 695 SMART HOX_1 378 442 IPR001356 GO:0003677(InterPro)
Cec02g2357 695 CDD homeodomain 378 439 IPR001356 GO:0003677(InterPro)
Cec02g2357 695 SMART prehox3 182 328 IPR006563 -
Cec02g2357 695 Pfam Homeobox KN domain 395 434 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2357 Cec-Chr2:40804767 Cec11g0426 Cec-Chr11:4464511 3.20E-78 dispersed
Cec10g1845 Cec-Chr10:33299423 Cec02g2357 Cec-Chr2:40804767 2.90E-135 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29144 PF07526 POX 3.30E-44 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2357 - - - 0.0